1      -     51
UN25656        --> AGGGATTAGTGATCAAAACAAGACATGTCAAACGTAAACTTTCTTGAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945236       <-- AGGGATTAGTGATCAAAACAAGACATGTCAAACGTAAACTTTCTTGAGAT
EX908236       <-- ..GGATTAGTGATCAAAACAAGACATGTCAAACGTAAACTTTCTTGAGAT
FD531772       <-- ........ggGATCAAAACAAGACATGTCAAACGTAAACTTTCTTGAGAT
FD969823       <-- ..............................AACGTAAACTTTCTTGAGAT
EY902405       <-- ..................................................
FD949610       --> AGGGATTAGTGATCAAAACAAGACATGTCAAACGTAAACTTTCTTGAGAT
EY906149       --> ..GGATTAGTGATCAAAACAAGACATGTCAAACGTAAACTTTCTTGAGAT
EX770198       --> .....gggGTGATCAAAACAAGACATGTCAAACGTAAACTTTCTTGAGAT
FD974326       --> ..............................AACGTAAACTTTCTTGAGAT
FD536270       --> ..................................................

               51     -    101
UN25656        --> TCAATACAAGCTCTCTAAGAACAAGATGTTGAGGAAGCCTTCAAGATTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945236       <-- TCAATACAAGCTCTCTAAGAACAAGATGTTGAGGAAGCCTTCAAGATTGT
EX908236       <-- TCAATACAAGCTCTCTAAGAACAAGATGTTGAGGAAGCCTTCAAGATTGT
FD531772       <-- TCAATACAAGCTCTCTAAGAACAAGATGTTGAGGAAGCCTTCAAGATTGT
FD969823       <-- TCAATACAGGCTCTCTAAGAACAAGATGTTGAGGAAGCCTTCAAGATTGT
EY902405       <-- ..................................................
FD949610       --> TCAATACAAGCTCTCTAAGAACAAGATGTTGAGGAAGCCTTCAAGATTGT
EY906149       --> TCAATACAAGCTCTCTAAGAACAAGATGTTGAGGAAGCCTTCAAGATTGT
EX770198       --> TCAATACAAGCTCTCTAAGAACAAGATGTTGAGGAAGCCTTCAAGATTGT
FD974326       --> TCAATACAGGCTCTCTAAGAACAAGATGTTGAGGAAGCCTTCAAGATTGT
FD536270       --> ..................................................

               101    -    151
UN25656        --> TCTCGAGAGACAGGCAATCCTCAGGACTCTCTTCACCTGGATCAGTGGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945236       <-- TCTCGAGAGACAGGCAATCCTCAGGACTGTCTTCACCTGGATCAGTGGGC  Raphanus sativus cv Early Scarlet Globe
EX908236       <-- TCTCGAGAGACAGGCAATCCTCAGGACTCTCTTCACCTGGATCAGTGGGC  Raphanus sativus cv Rat-Tail Radish #3870
FD531772       <-- TCTCGAGAGACAGGCAATCCTCAGGACTGTCTTCACCTGGATCAGTGGGC  Raphanus raphanistrum subsp. maritimus
FD969823       <-- TCTCGAGAGACAGGCAATCCTCAGGACTCTCTTCACCTGGATCAGTGGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902405       <-- ....................tctGGACTCTCTTCACCTGGATCAGTGGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD949610       --> TCTCGAGAGACAGGCAATCCTCAGGACTGTCTTCACCTGGATCAGTGGGC  Raphanus sativus cv Early Scarlet Globe
EY906149       --> TCTCGAGAGACAGGCAATCCTCTGGACTCTCTTCACCTGGATCAGTGGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
EX770198       --> TCTCGAGAGACAGGCAATCCTCAGGACTGTCTTCACCTGGATCAGTGGGC  Raphanus raphanistrum subsp. landra
FD974326       --> TCTCGAGAGACAGGCAATCCTCAGGACTCTCTTCACCTGGATCAGTGGGC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536270       --> ...........................................AGTGGGC  Raphanus raphanistrum subsp. maritimus

               151    -    201
UN25656        --> GTCCCTCAGCCTACAATCAACGAGATGAGACGTGTTTTTAACAGATTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945236       <-- GTCCCTCAGCCTACAATCAACGAGATGAGACGTGTTTTTAACAGATTTGA  Raphanus sativus cv Early Scarlet Globe
EX908236       <-- GTCCCTCAGCCTACAATCAACGAGATGAGACGTGTTTTCAACAGATTTGA  Raphanus sativus cv Rat-Tail Radish #3870
FD531772       <-- GTCCCTCAGCCTACAATCAACGAGATGAGACGTGTTTTTAACAGATTTGA  Raphanus raphanistrum subsp. maritimus
FD969823       <-- GTCCCTCAGCCTACAATCAACGAGATGAGACGTGTTTTCAACAGATTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902405       <-- GTCCCTCAGCCTACAATCAACGAGATGAGACGTGTTTTCAACAGATTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD949610       --> GTCCCTCAGCCTACAATCAACGAGATGAGACGTGTTTTTAACAGATTTGA  Raphanus sativus cv Early Scarlet Globe
EY906149       --> GTCCCTCAGCCTACAATCAACGAGATGAGACGTGTTTTCAACAGATTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX770198       --> GTCCCTCAGCCTACAATCAACGAGATGAGACGTGTTTTTAACAGATTTGA  Raphanus raphanistrum subsp. landra
FD974326       --> GTCCCTCAGCCTACAATCAACGAGATGAGACGTGTTTTCAACAGATTTGA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536270       --> GTCCCTCAGCCTACAATCAACGAGATGAGACGTGTTTTTAACAGATTTGA  Raphanus raphanistrum subsp. maritimus

               201    -    251
UN25656        --> TTCAGACAAAGACGGCAAAATCTCTCAGACTGAGTACAAGGTGGTGCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945236       <-- TTCAGACAAAGACGGCAAAATCTCTCAGACTGAGTACAAGGTGGTGCTGA  Raphanus sativus cv Early Scarlet Globe
EX908236       <-- TTCAGACAAAGACGGAAAAATCTCTCAGACTGAGTACAAGGTGGTGCTGA  Raphanus sativus cv Rat-Tail Radish #3870
FD531772       <-- TTCAGACAAAGACGGCAAAATCTCTCAGACTGAGTACAAGGTGGTGCTGA  Raphanus raphanistrum subsp. maritimus
FD969823       <-- TTCAGACAAAGACGGCAAAATCTCTCAGACTGAGTACAAGGTGGTGCTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902405       <-- TTCAGACAAAGACGGCAAAATCTCTCAGACTGAGTACAAGGTGGTGCTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD949610       --> TTCAGACAAAGACGGCAAAATCTCTCAGACTGAGTACAAGGTGGTGCTGA  Raphanus sativus cv Early Scarlet Globe
EY906149       --> TTCAGACAAAGACGGCAAAATCTCTCAGACTGAGTACAAGGTGGTGCTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX770198       --> TTCAGACAAAGACGGCAAAATCTCTCAGACTGAGTACAAGGTGGTGCTGA  Raphanus raphanistrum subsp. landra
FD974326       --> TTCAGACAAAGACGGCAAAATCTCTCAGACTGAGTACAAGGTGGTGCTTA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536270       --> TTCAGACAAAGACGGCAAAATCTCTCAGACTGAGTACAAGGTGGTGCTGA  Raphanus raphanistrum subsp. maritimus

               251    -    301
UN25656        --> GGGCTCTAGGACAAGAGAGAGCGATCCAAGACGTGCCCAAGATCTTTAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945236       <-- GGGCTCTAGGACAAGAGAGAGCGATCCAAGACGTGCCCAAGATCTTTAAG  Raphanus sativus cv Early Scarlet Globe
EX908236       <-- GAGCTCTAGGACAAGAGAGAGCGATCCAAGACGTGCCCAAGATCTTTAAG  Raphanus sativus cv Rat-Tail Radish #3870
FD531772       <-- GGGCTTTAGGACAAGAGAGAGCGATCCAAGACGTGCCCAAGATCTTTAAG  Raphanus raphanistrum subsp. maritimus
FD969823       <-- GAGCTCTAGGACAAGAGAGAGCGATCCA-GACGTGCCCAAGATCTTTAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902405       <-- GAGCTCTAGGACAAGAGAGAGCGATCCAAGACGTGCCCAGGATCTTTAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD949610       --> GGGCTCTAGGACAAGAGAGAGCGATCCAAGACGTGCCCAAGATCTTTAAG  Raphanus sativus cv Early Scarlet Globe
EY906149       --> GAGCTCTAGGACAAGAGAGAGCGATCCAAGACGTGCCCAGGATCTTTAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX770198       --> GGGCTCTAGGACAAGAGAGAGCGATCCAAGACGTGCCCAAGATCTTTAAG  Raphanus raphanistrum subsp. landra
FD974326       --> GAGCTCTAGGACAAGAGAGAGCGATCCA-GACGTGCCCAAGATCTTTAAG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536270       --> GGGCTCTAGGACAAGAGAGAGCGATCCAAGACGTGCCCAAGATCTTTAAG  Raphanus raphanistrum subsp. maritimus

               301    -    351
UN25656        --> GCCGCGGATTTGGACGGTGATGGGTTTATTGACTTCAAGGAGTTTATAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945236       <-- GCCGCGGATTTGGACGGTGATGGGTTTATTGACTTCAAGGAGTTTATAGA
EX908236       <-- GCCGCGGATTTGGACGGTGATGGGTTTATTGACTTCAAGGAGTTTATAGA
FD531772       <-- GCCGCGGATTTGGACGGTGATGGGTTTATTGACTTCAAGGAGTTTATAGA
FD969823       <-- GCCGCGGATTTGGACGGTGATGGGTTTATTGACTTCAAGGAGTTTATAGA
EY902405       <-- GCCGCGGATTTGGACGGTGATGGGTTTATTGACTTCAAGGAGTTTATAGA
FD949610       --> GCCGCGGATTTGGACGGTGATGGGTTTATTGACTTCAAGGAGTTTATAGA
EY906149       --> GCCGCGGATTTGGACGGTGATGGGTTTATTGACTTCAAGGAGTTTATAGA
EX770198       --> GCCGCGGATTTGGACGGTGATGGGTTTATTGACTCCAAGGAGTTTATAGA
FD974326       --> GCCGCGGATTTGGACGGTGATGGGTTTATTGACTTCAAGGAGTTTATAGA
FD536270       --> GCCGCGGATTTGGACGGTGATGGGTTTATTGACTTCAAGGAGTTTATAGA

               351    -    401
UN25656        --> AGCACACAAGAGAAGTGGAGGGATTAGATCTTTGGATATACGAAACGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945236       <-- AGCACACAAGAGAAGTGGAGGGATTAGATCTTTGGATATACGAAACGCTT
EX908236       <-- AGCACTCAAGAGAAGTGGAGGGATTAGATCTTTGGATATACGAAACGCTT
FD531772       <-- AGCACACAAGAGAAGTGGAGGGATTAGATCTTTGGATATACGAAACGCTT
FD969823       <-- AGCACACAAGAGAAGTGGAGGGATTAGATCTTTGGATATACGAAACGCTT
EY902405       <-- AGCACACAAGAGAAGTGGAGGGATTAGATCTTTGGATATACGAAACGCTT
FD949610       --> AGCACACAAGAGAAGTGGAGGGATTAGATCTTTGGATATACGAAACGCTT
EY906149       --> AGCACACAAGAGAAGTGGAGGGATTAGATCTTTGGATATACGAAACGCTT
EX770198       --> AGCACACAAGAGAAGTGGAGGGATTAGATCTTTGGATATACGAAACGCTT
FD974326       --> AGCACACAAGAGAAGTGGAGGGATTAGATCTTTGGATATACGAAACGCTT
FD536270       --> AGCACACAAGAGAAGTGGAGGGATTAGATCTTTGGATATACGAAACGCTT

               401    -    451
UN25656        --> TCTGGACATTTGATCTGAACGGGGATGGGAAGATAAGCGCAGAAGAAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945236       <-- TCTGGACATTTGATCTGAACGGGGATGGCAAGATAAGCGCAGAAGAAGTG  Raphanus sativus cv Early Scarlet Globe
EX908236       <-- TCTGGACATTTGATCTGAACGGGGATGGGAAGATAAGCGCAGAAGAAGTG  Raphanus sativus cv Rat-Tail Radish #3870
FD531772       <-- TCTGGACATTTGATCTGAACGGGGATGGCAAGATAAGCGCAGAAGAAGTG  Raphanus raphanistrum subsp. maritimus
FD969823       <-- TCTGGACATTTGATCTGAACGGGGATGGGAAGATAAGCGCAGAAGAAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902405       <-- TCTGGACATTTGATCTGAACGGGGATGGGAAGATAAGCGCAGAAGAAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD949610       --> TCTGGACATTTGATCTGAACGGGGATGGCAAGATAAGCGCAGAAGAAGTG  Raphanus sativus cv Early Scarlet Globe
EY906149       --> TCTGGACATTTGATCTGAACGGGGATGGGAAGATAAGCGCAGAAGAAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
EX770198       --> TCTGGACATTTGATCTGAACGGGGATGGCAAGATAAGCGCAGAAGAAGTG  Raphanus raphanistrum subsp. landra
FD974326       --> TCTGGACATTTGATCTGAACGGGGATGGGAAGATAAGCGCAGAAGAAGTG  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536270       --> TCTGGACATTTGATCTGAACGGGGATGGCAAGATAAGCGCAGAAGAAGTG  Raphanus raphanistrum subsp. maritimus

               451    -    501
UN25656        --> ATGTCGGTTCTGAGGAAGCTTGGTGAGAGGTGCAACTTAGAAGACTGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945236       <-- ATGTCGGTTCTGAGGAAGCTTGGTGAGAGGTGCAACTTAGAAGACTGCAA
EX908236       <-- ATGTCGGTTCTGAGGAAGCTTGGTGAGAGGTGCAACTTAGAAGACTGCAA
FD531772       <-- ATGTCGGTTCTGAGGAAGCTTGGTGAGAGGTGCAACTTAGAAGACTGCAA
FD969823       <-- ATGTCGGTTCTGAGGAAGCTTGGTGAGAGGTGCAACTTAGAAGACTGCAA
EY902405       <-- ATGTCGGTTCTGAGGAAGCTTGGTGAGAGGTGCAACTTAGAAGACTGCAA
FD949610       --> ATGTCGGTTCTGAGGAAGCTTGGTGAGAGGTGCAACTTAGAAGACTGCAA
EY906149       --> ATGTCGGTTCTGAGGAAGCTTGGTGAGAGGTGCAACTTAGAAGACTGCAA
EX770198       --> ATGTCGGTTCTGAGGAAGCTTGGTGAGAGGTGCAACTTAGAAGACTGCAA
FD974326       --> ATGTCGGTTCTGAGGAAGCTTGGTGAGAGGTGCAACTTAGAAGACTGCAA
FD536270       --> ATGTCGGTTCTGAGGAAGCTTGGTGAGAGGTGCAACTTAGAAGACTGCAA

               501    -    551
UN25656        --> GAGAATGGTGAGAGCTGTTGATGCAGATGGAGATGGATTGGTTAATATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945236       <-- GAGAATGGTGAGAGCTGTTGATGCAGATGGAGATGGATTGGTTAATATGG
EX908236       <-- GAGGATGGTGAGAGCTGTTGATGCAGATGGAGATGGATTGGTTAATACGG
FD531772       <-- GAGAATGGTGAGAGCTGTTGATGCAGATGGAGATGGATTGGTTAATATGG
FD969823       <-- GAGAATGGTGAGAGCTGTTGATGCAGATGGAGATGGATTGGTTAATATGG
EY902405       <-- GAGAATGGTGAGAGCTGTTGATGCAGATGGAGATGGATTGGTTAATATGG
FD949610       --> GAGAATGGTGAGAGCTGTTGATGCAGATGGAGATGGATTGGTTAATATGG
EY906149       --> GAGAATGGTGAGAGCTGTTGATGCAGATGGAGATGGATTGGTTAATATGG
EX770198       --> GAGAGTGGTGAGAGCTGTTGATGCAGATGGAGATGGATTGGTTAATATGG
FD974326       --> GAGAATGGTGAGAGCTGTTGATGCAGATGGAGATGGATTGGTTAATATGG
FD536270       --> GAGAATGGTGAGAGCTGTTGATGCAGATGGAGATGGATTGGTTAATATGG

               551    -    601
UN25656        --> AAGAGTTCATGAGGATGATGACTCAGTCTATGAACATTGTCTGAACAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945236       <-- AAGAGTTCATGAGGATGATGACTCAGTCTATGAACATTGTCTGAACAGAT  Raphanus sativus cv Early Scarlet Globe
EX908236       <-- AAGAGTTCATGAGGATGATGACTCAATCTATGAACATTGTCTGAACAGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD531772       <-- AAGAGTTCATGAGGATGATGACTCAGTCTATGAACATTGTCTGAACAGAT  Raphanus raphanistrum subsp. maritimus
FD969823       <-- AAGAGTTCATGAGGATGATGACTCAATCTATGAACATTGTCTGAACAGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902405       <-- AAGAGTTCATGAGGATGATGACTCAATCTATGAACATTGTCTGAACAGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD949610       --> AAGAGTTCATGAGGATGATGACTCAGTCTATGAACATTGTCTGAACAGAT  Raphanus sativus cv Early Scarlet Globe
EY906149       --> AAGAGTTCATGAGGATGATGACTCAATCTATGAACATTGTCTGAACAGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
EX770198       --> AAGAGTTCATGAGGATGATGACTCAGTCTATGAACATTGTCTGAACAGAT  Raphanus raphanistrum subsp. landra
FD974326       --> AAGAGTTCATGAGGATGATGACTCAATCTATGAACATTGTCTGAACAGAT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536270       --> AAGAGTTCATGAG-ATGATGACTCAGTCTATGAACATTGTCTGAACAGAT  Raphanus raphanistrum subsp. maritimus

               601    -    651
UN25656        --> CTTTCTCTATTCTTGTAATAAAGGTTATTATTTATACATATCTTATTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945236       <-- CTTTCTCTATTCTTGTAATAAAGGTTATTATTTATACATATCTTATTTCA  Raphanus sativus cv Early Scarlet Globe
EX908236       <-- ATTTCTCTATTATTGTAATAAAGGTTATTATTTATACATATCTTATTTC.  Raphanus sativus cv Rat-Tail Radish #3870
FD531772       <-- CTTTCTCTATTCTTGTAATAAAGGTTATTATTTATACATATCTTATTTCA  Raphanus raphanistrum subsp. maritimus
FD969823       <-- CTTTCTCTATTATTGTAATAAAGGTTATTATTTATgt.............  Raphanus raphanistrum subsp. raphanistrum (MS)
EY902405       <-- CTTTCTCTATTATTGTAATAAAGGTTATTATTTATACATATCTTATTTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD949610       --> CTTTCTCTATTCTTGTAATAAAG-TTATTATTTATACATATCTTATTTCA  Raphanus sativus cv Early Scarlet Globe
EY906149       --> CTTTCTCTATTATTGTAATAAAGGTTATTATTTATACATATCTTATTTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EX770198       --> CTTTCTCTATTCTTGTAAT...............................  Raphanus raphanistrum subsp. landra
FD974326       --> CTTTCTCTATTATTGTAATAAAGGTTATTATTTATg..............  Raphanus raphanistrum subsp. raphanistrum (MS)
FD536270       --> CTTTCTCTATTCTTGTAATAAAG-TTATTATTTATACATATCTTATTTCA  Raphanus raphanistrum subsp. maritimus

               651    -    701
UN25656        --> AAAACATGAATGTTGCAAATTAAAAAAAAACATTATCACCAATGTTCTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD945236       <-- AAAACATGAATGTTGCAAATTAAAAAAAAACATTATCACCAATGTTCTGC
EX908236       <-- ..................................................
FD531772       <-- g.................................................
FD969823       <-- ..................................................
EY902405       <-- AAAACATGAATGTTGCAAATTTAAAccgacatgatcacc...........
FD949610       --> AAA-CATGAATGTTGCAAATTAAAAAAAA-CATTATCACCAATGTTCTGC
EY906149       --> AAAACATGAATGTTGCAAATTTAAAccgacatgatcacc...........
EX770198       --> ..................................................
FD974326       --> ..................................................
FD536270       --> g.................................................

               701    -    751
UN25656        --> C
                   ~
FD945236       <-- C
EX908236       <-- .
FD531772       <-- .
FD969823       <-- .
EY902405       <-- .
FD949610       --> C
EY906149       --> .
EX770198       --> .
FD974326       --> .
FD536270       --> .