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Alignment for radish unigene UN25776

               -5     -     45
UN25776        --> ......AATATAATTTCATGGCTATGATTGTCTTTCAAAAGTTCACTTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916518       <-- ...................................CAAAAGTTCACTTAG
EX754787       <-- ..................................................
FD561434       <-- ..................................................
EV551220       <-- ..................................................
EV566999       <-- ..................................................
FD550346       <-- ..................................................
FD540021       <-- ..................................................
FD980992       <-- ..................................................
FD966194       <-- ..................................................
FD961726       --> ......AATATAATTTCATGGCTATGATTGTCTTTCAAAAGTTCACTTAG
FD546317       --> ggattggtaATAATTTCATGGCTATGATTGTCTTTCAAAAGTTCACTTAG
EX901124       --> .........................ggTTGTCTTTCAAAAGTTCACTTAG
EV546358       --> .............................GTCTTTCAAAAGTTCACTTAG
EV572011       --> .............................GTCTTTCAAAAGTTCACTTAG
EX759034       --> ...................................CAAAAGTTCACTTAG
EY912190       --> ...................................CAAAAGTTCACTTAG
FD565599       --> ...................................CAAAAGTTCACTTAG
FD944662       --> ...................................CAAAAGTTCACTTAG
FD976791       --> ..................................................
EY937103       --> ..................................................

               45     -     95
UN25776        --> TCAAGAAAAAATTCCAAACGTTCAGAGAACGACACTGGTACTAAAGGTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916518       <-- TCAAGAAAAAATTCCAAACGTTCAGAGAACGACACTGGTACTAAAGGTAT
EX754787       <-- ..................................................
FD561434       <-- ..................................................
EV551220       <-- ..................................................
EV566999       <-- ..................................................
FD550346       <-- ..................................................
FD540021       <-- ..................................................
FD980992       <-- ..................................................
FD966194       <-- ..................................................
FD961726       --> TCAAGAAAAGATTCCAAACGTTCAGAGAACGACACTGGTACTAAAGGTAT
FD546317       --> TCGAGAAAAAATTCCAAACGTTCAGAGAACGACACTGGTACTAAAGGTAT
EX901124       --> TCAAGAAAAAATTCCAAACGTTCAGAGAACGACACTGGTACTAAAGGTAT
EV546358       --> TCGAGAAAAAATTCCAAACGTTCAGAGAACGACACTGGTACTAAAGGTAT
EV572011       --> TCAAGAAAAAATTCCAAACGTTCAGAGAACGACACTGGTAGTAAAGGTAT
EX759034       --> TCAAGAAAAAATTCCAAACGTTCAGAGAACGACACTGGTACTAAAGGTAT
EY912190       --> TCAAGAAAAAATTCCAAACGTTCAGAGAACGACACTGGTACTAAAGGTAT
FD565599       --> TCAAGAAAAAATTCCAAACGTTCAGAGAACGACACTGGTACTAAAGGTAT
FD944662       --> TCAAGAAAAAATTCCAAACGTTCAGAGAACGACACTGGTACTAAAGGTAT
FD976791       --> ....................................GGTACTAAAGGTAT
EY937103       --> ..................................................

               95     -    145
UN25776        --> TGCAGAAAAAAAAAA-CACTAAAGAAATAGCTGAACAACCACTCTTGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916518       <-- TGCAGAAAAAAAAAAACACTAAAGAAATAGCTGAACAACCACTCTTGCAA
EX754787       <-- ..................................................
FD561434       <-- ..................................................
EV551220       <-- ..................................................
EV566999       <-- ..................................................
FD550346       <-- ..................................................
FD540021       <-- ..................................................
FD980992       <-- ..................................................
FD966194       <-- ..................................................
FD961726       --> TGCAGAAAAAAAAAA-C--TAAAGAAATAGCTGAACAACCCCTCTTGCAA
FD546317       --> TGCAGAAAAAAAAAA-C--TAAAGAAATAGCTGAACAACCACTCTTGCAA
EX901124       --> TGCAGAAAAAAAAAA-CACTAAAGAAATAGCTGAACAACCACTCTTGCAA
EV546358       --> TGCAGAAAAAAAAA----CTAAAGAAATAGCTGAACAACCACTCTTGCAA
EV572011       --> TGCAGAAAAAAAAA----CTAAAGAAATAGCTGAACAACCCCTCTTGCAA
EX759034       --> TGCAGAAAAGAAAAA--ACTAAAGAAATAGCTGAACGACCACTCTTGCAA
EY912190       --> TGCAGAAAAAAAAAAACACTAAAGAAATAGCTGAACAACCACTCTTGCAA
FD565599       --> TGCAGAAAAAAAAAA-CACTAAAGAAATAGCTGAACAACCACTCTTGCAA
FD944662       --> TGCAGAAAAAAAAAA-CACTAAAGAAATAGCTGAACAACCACTCTTGCAA
FD976791       --> TGCAGAAAAAAAAAA-C--TAAAGAAATAGCTGAACAACCACTCTTGCAA
EY937103       --> TGCAGAAAAAAAAAA-CACTAAAAAAATAGCTGAACAACCACTCTTGCAA

               145    -    195
UN25776        --> CTATAGTAACTAAAGAATTTACCTCAACACAATGGTAATATGTAATTATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916518       <-- CTA---TAACTAAAGAATTTACCTCAACACAATGGTAATATGTAATTATA
EX754787       <-- ..................................................
FD561434       <-- ..................................................
EV551220       <-- ..................................................
EV566999       <-- ..................................................
FD550346       <-- ..................................................
FD540021       <-- ..................................................
FD980992       <-- ..................................................
FD966194       <-- ..................................................
FD961726       --> CTATAGTAACTAAACAATTTACCTCAACACAATGGTAATATGTAATTATA
FD546317       --> CTATAGTAACTAAAGAATTTACCTCAACACAATGGTAATATGTAATTATA
EX901124       --> CTATAGTAACTAAAGAATTTACCTCAACACAATGGTAATATGTAATTATA
EV546358       --> CTATAGTAACTAAAGAATTTACCTCAACACAATGGTAATATGTAATTATA
EV572011       --> CTATAGTAACTAAACAATTTACCTCAACACAATGGTAATATGTAATTATA
EX759034       --> CTATAGTAACTAAAGAATTTACCTCAACACAATGGTAATATGTAATTATA
EY912190       --> CTATA---ACTAAAGAATTTACCTCAACACAATGGTAATATGTAATTATA
FD565599       --> CTATAGTAACTAAAGAATTTACCTCAACACAATGGTAATATGTAATTATA
FD944662       --> CTATAGTAACTAAAGAATTTACCTCAACACAATGGTAATATGTAATTATA
FD976791       --> CTATAGTAACTAAAGAATTTACCTCAACACAATGGTAATATGTAATTATA
EY937103       --> CTATAGTAACTAAAGAATTTACCTCAACACAATGGTAATATGTAATTATA

               195    -    245
UN25776        --> TTCATACGAGATGCACATACTTCAAACCTTTTACCCGAAAGGGAAAATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916518       <-- TTCATACGAGATGCACATACTTCAAACCTTTTACCCGAAAGGGAAAATTA
EX754787       <-- ..................................................
FD561434       <-- ..................................................
EV551220       <-- ..................................................
EV566999       <-- ..................................................
FD550346       <-- ..................................................
FD540021       <-- ..................................................
FD980992       <-- ..................................................
FD966194       <-- ..................................................
FD961726       --> TTCATACGAGATGCACATACTTCAAACCTTTTACCCGAAAGGGAAAATTA
FD546317       --> TTCATACGAAATGCACATACTTCAAACCTTTTACCCGTAAGGGAAAATTA
EX901124       --> TTCATACGAGATGCACATACTTCAAACCTTTTACCCGAAAGGGAAAATTA
EV546358       --> TTCATACGAGATGCACATACTTCAAACCTTTTACCCGTAAGGGAAAATTA
EV572011       --> TCCATACGAGATGCACATACTTCAAACCTTTTACCCGAAAGGGAAAATTA
EX759034       --> TTCATACGAGATGCACATACTTCAAACCTTTTACCCGAAAGGGAAAATTA
EY912190       --> TTCATACGAGATGCACATACTTCAAACCTTTTACCCGAAAGGGAAAATTA
FD565599       --> TTCATACGAGATGCACATACTTCAAACCTTTTACCCGAAAGGGAAAATTA
FD944662       --> TTCATACGAGATGCACATACTCCAAACCTTTTACCCGAAAGGGAAAATTA
FD976791       --> TTCATACGAGATGCACATACTTCAAACCTTTTACCCGTAAGGGAAAATTA
EY937103       --> TTCATACGAGATGCACATACTTCAAACCTTTTACCCGAAAGGGAAAATTA

               245    -    295
UN25776        --> CCACCATCCTCTCTTCCTTCTCTTTTTACTTGTTTCCCCTAAAGTAGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916518       <-- CCACCATCCTCTCTTCCTTCTCTTTTTACTTGTTTCCCCTAAAGTAGAGG
EX754787       <-- ........................TTTACTTGTTTCCCCTAAAGTAGAGG
FD561434       <-- ..................................................
EV551220       <-- ..................................................
EV566999       <-- ..................................................
FD550346       <-- ..................................................
FD540021       <-- ..................................................
FD980992       <-- ..................................................
FD966194       <-- ..................................................
FD961726       --> CCACCATCCTCTCTTCCTTCTCTTTTTACTTGTTTCCCCTAAAGTAGAGG
FD546317       --> CCACCATCCTCTCTTCCTTCTCTTTTTACTTGTTTCCCCTAAAGTAGAGG
EX901124       --> CCACCATCCTCTCTTCCTTCTCTTTTTACTTGTTTCCCCTAAAGTAGAGG
EV546358       --> CCACCATCCTCTCTTCCTTCTCTTTTTACTTGTTTCCCCTAAAGTAGAGG
EV572011       --> CCACCATCCTCTCTTCCTTCTCTTTTTACTTGTTTCCCCTAAAGTAGAGG
EX759034       --> CCACCATCCTCTCTTCCTTCTCTTTTTACTTGTTTCCCCTAAAGTAGAGG
EY912190       --> CCACCATCCTCTCTTCCTTCTCTTTTTACTTGTTTCCCCTAAAGTAGAGG
FD565599       --> CCACCATCCTCTCTTCCTTCTCTTTTTACTTGTTTCCCCTAAAGTAGAGG
FD944662       --> CCACCATCCTCTCTTCCTTCTCTTTTTACTTGTTTCCCCTAAAGTAGAGG
FD976791       --> CCACCATCCTCTCTTCCTTCTCTTTTTACTTGTTTCCCCTAAAGTAGAGG
EY937103       --> CCACCATCCTCTCTTCCTTCTCTTTTTACTTGTTTCCCCTAAAGTAAAGG

               295    -    345
UN25776        --> TAAATTTTCTGAAGAACCCATAGACTCAGAAGTGACTCCAAGCAGAAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916518       <-- TAAATTTTCTGAAGAACCCATAGACTCAGAAGTGACTCCAAGCAGAAGAG
EX754787       <-- TAAATTTTCTGAAGAACCCATAGACTCAGAAGTGACTCCAAGCAGAAGAG
FD561434       <-- ..........................................CAGAAGAG
EV551220       <-- ..................................................
EV566999       <-- ..................................................
FD550346       <-- ..................................................
FD540021       <-- ..................................................
FD980992       <-- ..................................................
FD966194       <-- ..................................................
FD961726       --> TAAATTTTCTGAAGAACCCATAGACTCAGAAGTGACTCCAAGCAGAAGAG
FD546317       --> TAAATTTTCTGAAAAACCCATAGACTCAGAAGTGACTCCAAGCAGAAGAA
EX901124       --> TAAAATTTCTGAAGAACCCATAGACTCAGAAGTGACTCCAAGCAGAAGAG
EV546358       --> TAAATTTTCTGAAGAACCCATAGACTCAGAAGTGACTCCAAGCAGAAGAG
EV572011       --> TAAATTTTCTGAAGAACCCATAGACTCAGAAGTGACTCCAAGCAGAAGAG
EX759034       --> TAAATTTTCTGAAGAACCCATAGACTCAGAAGTGACTCCAAGCAGAAGAG
EY912190       --> TAAATTTTCTGAAGAACCCATAGACTCAGAAGTGACTCCAAGCAGAAGAG
FD565599       --> TAAATTTTCTGAAGAACCCATAGACTCAAAAGTGACTCCAAGCAGAAGAG
FD944662       --> TAAATTTTCTGAAGAACCCATAGACTCAGAAGTGACTCCAAGCAGAAGAG
FD976791       --> TAAATTTTCTGAAGAACCCATAGACTCAGAAGTGACTCCGAGCAGAAGAG
EY937103       --> TA................................................

               345    -    395
UN25776        --> ACCAAAGCCGATAAAGTAGAAGATCCCGGCTAATACACTGTCTGAGATGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916518       <-- ACCAAAGCCGATAAAGTAGAAGATCCCGGCTAATACACTGTCTGAGATGA
EX754787       <-- ACCAAAGCCGATAAAGTAGAAGATCCCGGCTAATACACTGTCTGAGATGA
FD561434       <-- ACCAAAGCCGATAAAGTAGAAGATCC-GGCTAATACACTGTCTGAGATGA
EV551220       <-- ...........TAAAGTAGAAGATCCCGGCTAATACACTGTCTGAGATGA
EV566999       <-- ..............................TAATACACTGTCTGAGATGA
FD550346       <-- ..................................................
FD540021       <-- ..................................................
FD980992       <-- ..................................................
FD966194       <-- ..................................................
FD961726       --> ACCAAAGCCGATAAAGTAGAAGATCCCGGCTAATACACTGTCTAAAATGA
FD546317       --> ACCAAAGCCGATAAAGTAGAAGATCCCGGCTAATACACTGTCTGAAATGA
EX901124       --> ACCAAAGACGATAAAGTAGAAGATCCCGGCTAATACACTGTCTGAAATGA
EV546358       --> ACCAAAGCCGATAAAGTAGAAGATCCCGGCTAATACACTGTCTGAGATGA
EV572011       --> ACCAAAGCCGATAAAGTAGAAGATCCCGGCTAATACACTGTCTGAGATGA
EX759034       --> ACCAAAGCCGATAAAGTAGAAGATCCCGGCTAATACACTGTCTGAAATGA
EY912190       --> ACCAAAGCCGATAAAGTAGAAGATCCCGGCTAATACACTGTCTGAAATGA
FD565599       --> ACCAAAGCCGATAAAGTAGAAGATCCCGGCTAATACACTGTCTGAGATGA
FD944662       --> ACCAAAGCCGATAAAGTAGAAGATCCCGGCTAATACACTGTCTGAGATGA
FD976791       --> ACCAAAGCCGATAAAGTAGAAGATCCCGGCTAATACACTGTCTGAGATGA
EY937103       --> ..................................................

               395    -    445
UN25776        --> CATCAATTGCTGCAAGCACACCCGTTAATGATTTTCCATGGAAAAAGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916518       <-- CATCAATTGCTGCAAGCACACCCGTTAATGATTTTCCATGGAAAAAGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX754787       <-- CATCAATTGCTGCAAGCACACCCGTTAATGATTTTCCATGAAAAAAGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD561434       <-- CATCAATTGCTGCAAGCACACCCGTTAATGATTTTCCATGGAAAAAGATT  Raphanus sativus var. oleiformis
EV551220       <-- CATCAATTGCTGCAAGCACACCCGTTAATGATTTTCCATGGAAAAAGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566999       <-- CATCAATTGCTGCAAGCACACCCGTTAATGATTTTCCATGGAAAAAGATT  Raphanus raphanistrum subsp. landra
FD550346       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD540021       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980992       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD966194       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD961726       --> CATCAATTGCTGCAAGCACACCCGTTAATGATTTTCCATGGAAAAAGATC  Raphanus raphanistrum subsp. maritimus
FD546317       --> CATCAATTGCTGCACGCACACCCGTTAATGATTTTCCATGGAAAAAGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901124       --> CATCAATTGCTGCAAGCACACCCGTTAATGATTTTCCATGGAAAAAGATT  Raphanus sativus cv Early Scarlet Globe
EV546358       --> CATCAATTGCTGCAAGCACACCCGTTAATGATTTTCCATGGAAAAAGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572011       --> CATCAATTGCTGCAAGCACACCCGTTAATGATTTTCCATGGAAAAAGATT  Raphanus raphanistrum subsp. landra
EX759034       --> CATCAATTGCTGCAAGCACACCCGTTAATGATTTTCCATGAAAAAAGATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912190       --> CATCAATTGCTGCAAGCACACCCGTTAATGATTTTCCATGGAAAAAGATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565599       --> CATCAATTGCTGCAAGCACACCCGTTAATGATTTTCCATGGAAAAAGATT  Raphanus sativus var. oleiformis
FD944662       --> CATCAATTGCTGCAAGCACACCCGTTAATGATTTTCCATGGAAAAAGATT  Raphanus sativus cv Early Scarlet Globe
FD976791       --> CATCAATTGCTGCAAGCACACCCGTTAATGATTTTCCATGGAAAAAGATG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY937103       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               445    -    495
UN25776        --> GGCGGGGCAATGGCGGCAACGATGCAGAAGCCAATGTGAATCAAGTAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916518       <-- GGCGGGGCAATGGCGGCAACGATGCAGAAGCCAATGTGAATCAAGTAGGT
EX754787       <-- GGTGGGGCAATGGCAGCAACGATGCAGAAGCCAATGTGAATCAAGTAGGT
FD561434       <-- GGCGGGGCAATGGCGGCAACGATGCAGAAGCCAATGTGAATCAAGTAGGT
EV551220       <-- GGCGGGGCAATGGCGGCAACGATGCAGAAGCCAATGTGAATCAAGTAGGT
EV566999       <-- GGCGGGGCAATGGCGGCAACGATGCAGAAGCCAATGTGAATCAAGTAGGT
FD550346       <-- ...................CGATGCAGAAGCCAATGTGAATCAAGTAGGT
FD540021       <-- ..................................................
FD980992       <-- ..................................................
FD966194       <-- ..................................................
FD961726       --> GGCGGGGCAATGGCGGCAACGATGCAGAAGCCAATGTGAATCAAGTAGGT
FD546317       --> GGCGGGGCAATGGCGGCAACGATGCAGAAGCCAATGTGAATCAAGTAGGT
EX901124       --> GGCGGGGCAATGGCGGCAACGATGCAGAAGCCAATGTGAATCAAGTAGGT
EV546358       --> GGCGGGGCAATGGCGGCAACGATGCAGAAGCCAATGTGAATCAAGTAGGT
EV572011       --> GGCGGGGCAATGGCGGCAACGATGCAGAAGCCAATGTGAATCAAGTAGGT
EX759034       --> GGTGGGGCAATGGCAGCAACGATGCAGAAGCCAATGTGAATCAAGTAGGT
EY912190       --> GGCGGGGCAATGGCGGCAACGATGCAGAAGCCAATGTGAATCAAGTAGGT
FD565599       --> GGCGGGGCAATGGCGGCAACGATGCAAAAGCCAATGTGAATCAAGTAGGT
FD944662       --> GGCGAGGCAATGGCGGCAACGATGCAGAAGCCAATGTGAATCAAGTAGGT
FD976791       --> GGCGGGGCAATGGCGGCAACGATGCAGAAGCCAATGTGAATCAAGTAGGT
EY937103       --> ..................................................

               495    -    545
UN25776        --> GAAGAAAAACCAACCAAACTTCAAAGCGCTGTCAGTCCTCATGGCTCGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916518       <-- GAAGAAAAACCAACCAAACTTCAAAGCGCTGTCAGTCCTCATGGCTCGGT
EX754787       <-- GAAGAAAAACCAACCAAACTTCAAAGCGCTGTCAGTCCTCATGGCTCGGT
FD561434       <-- GAAGAAAAACCAACCAAACTTCAAAGCGCTGTCAGTCCTCATGGCTCGGT
EV551220       <-- GAAGAAAAACCAACCAAACTTCAAAGCGCTGTCAGTCCTCATGGCTCGGT
EV566999       <-- GAAGAAAAACCAACCAAACTTCAAAGCGCTGTCAGTCCTCATGGCTCGGT
FD550346       <-- GAAGAAAAACCAACCAAACTTCAAAGCGCTGTCAGTCCTCATGGCTCGGT
FD540021       <-- .........................................TGGCTCGGT
FD980992       <-- ..................................................
FD966194       <-- ..................................................
FD961726       --> GAAGAAAAACCAACCAAACTTCAAAGCGCTGTCAGTCCTCATGGCTCGGT
FD546317       --> GAAGAAAAACCAACCAAACTTCAAAGCGCTGTCAGTCCTCATGGCTCGGT
EX901124       --> GAAGAAAAACCAACCAAACTTCAAAGCGCTGTCAGTCCTCATGGCTCGGT
EV546358       --> GAAGAAAAACCAACCAAACTTCAAAGCGCTGTCAGTCCTCATGGCTCGGT
EV572011       --> GAAGAAAAACCAACCAAACTTCAAAGCGCTGTCAGTCCTCATGGCTCGGT
EX759034       --> GAAGAAAAACCAACCAAACTTCAAAGCGCTGTCAGTCCTCATGGCTCGGT
EY912190       --> GAAGAAAAACCAACCAAACTTCAAAGCGCTGTCAGTCCTCATGGCTCGGT
FD565599       --> GAAGAAAAACCAACCAAACTTCAAAGCGCTGTCAGTCCTCATGGCTCGGT
FD944662       --> GAAGAAAAACCAACCAAACTTCAAAGCGCTGTCAGTCCTCATGGCTCGGT
FD976791       --> GAAGAAAAACCAACCAAACTTCAAAGCGCTGTCAGTCCTCATGGCTCGGT
EY937103       --> ..................................................

               545    -    595
UN25776        --> AGAGAGGCCTGTACCACACAACATAAGAAAGTGGACATCCCATCAGCGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916518       <-- AGAGAGGCCTGTACCATACAACATAAGAAAGTGGACATCCCATCAGCGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX754787       <-- AGAGAGGCCTGTACCACACAACATAAGAAAGTGGGCATCCCATCAAGGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD561434       <-- AGAGAGGCCTGTACCATACAACATAAGAAAGTGGACATCCCATCAGCGCA  Raphanus sativus var. oleiformis
EV551220       <-- AGAGAGGCCTGTACCACACAACATAAGAAAGTGGACATCCCATCAACGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566999       <-- AGAGAGGCCTGTACCATACAACATAAGAAAGTGGACACCCCATCAGCGCA  Raphanus raphanistrum subsp. landra
FD550346       <-- AGAGAGGCCTGTACCACACAACATAAGAAAGTGGACATCCCATCAACGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD540021       <-- AGAGAGGCCTGTACCATACAACATAAGAAAGTGGACATCCCATCAGCGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980992       <-- ............ACCACACAACATAAGAAAGTGGACATCCCATCAACGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD966194       <-- .........................AGAAAGTGGACATCCCATCAGCGCA  Raphanus raphanistrum subsp. maritimus
FD961726       --> AGAGAGGCCTGTACCATACAACATAAGAAAGTGGACATCCCATCAGCGCA  Raphanus raphanistrum subsp. maritimus
FD546317       --> AGAGAGGCCTGTACCACACAACATAAGAAAGTGGACATCCCATCAACGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901124       --> AGAGAGGCCTGTACCACACAACATAAGAAAGTGGACATCCCATCAGCGCA  Raphanus sativus cv Early Scarlet Globe
EV546358       --> AGAGAGGCCTGTACCACACAACATAAGAAAGTGGACATCCCATCAACGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572011       --> AGAGAGGCCTGTACCATACAACATAAGAAAGTGGACACCCCATCAGCGCA  Raphanus raphanistrum subsp. landra
EX759034       --> AGAGAGGCCTGTACCACACAACATAAGAAAGTGGGCATCCCATCAAGGCA  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912190       --> AGAGAGGCCTGTACCATACAACATAAGAAAGTGGACATCCCATCAGCGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565599       --> AGAGAGGCCTGTACCATACAACATAAGAAAGTGGACATCCCATCAGCGCA  Raphanus sativus var. oleiformis
FD944662       --> AGAGAGGCCTGTACCACACAACATAAGAAAGTGGACATCCCATCAGCGCA  Raphanus sativus cv Early Scarlet Globe
FD976791       --> AGAGAGGCCTGTACCACACAACATAAGAAAGTGGACATCCCATCAACGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY937103       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               595    -    645
UN25776        --> TATATCGTGGCAAGGAAAAAGATCTTCACACCTCCGCCTTTAATCCAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916518       <-- TATATCGTGGCAAGGAAAAAGATCTTCACACCTCCGCCTTTAATCCAGCA
EX754787       <-- TATATTGTGGCAAGGAAAAAGATCTTTACACCTCCGCCTTTAATCCAGCA
FD561434       <-- TATATCGTGGCAAGGAAAAAGATCTTCACACCTCCGCCTTTAATCCAGCA
EV551220       <-- TATATTGTGGCAAGGAAAAAGATCTTCACACCTCCGCCTTTAATCCAGCA
EV566999       <-- TATATCGTGGCAAGGAAAAAGATCTTCACACCTCCGCCTTTAATCCAGCA
FD550346       <-- TATATTGTGGCAAGGAAAAAGATCTTCACACCTCCGCCTTTAATCCAGCA
FD540021       <-- TATATCGTGGCAAGGAAAAAGATCTTCACACCTCCGCCTTTAATCCAGCA
FD980992       <-- TATATTGTGGCAAGGAAAAAGATCTTCACACCTCCGCCTTTAATCCAGCA
FD966194       <-- TATATCGTGGCAAGGAAAAAGATCTTCACACCTCCGCCTTTAATCCAGCA
FD961726       --> TATATCGTGGCAAGGAAAAAGATCTTCACACCTCCGCCTTTAATCCAGCA
FD546317       --> TATATTGTGGCAAGGAAAAA..............................
EX901124       --> TATATCGTGGCAAGGAAAAAGATCTTTACACCTCCGCCTTTAATCCAGCA
EV546358       --> TATATTGTGGCAAGGAAAAAGATCTTCACACCTCCGCCTTTAATCCAGCA
EV572011       --> TATATCGTGGCAAGGAAAAAGATCTTCACACCTCCGCCTTTAATCCAGCA
EX759034       --> TATATTGTGGCAAGGAAAAAGATCTTTACACCTCCGCCTTTAATCCAGCA
EY912190       --> TATATCGTGGCAA.....................................
FD565599       --> TATATCGTGGCAAGGAAAAAGATCTTCACACCTCCGCCTTTAATCCAGCA
FD944662       --> TATATCGTGGCAAGGAAAAA..............................
FD976791       --> TATATTGTGGCAAGGAAAAAGATCTTCACACCTCCGCCTTTAATCCAGCA
EY937103       --> ..................................................

               645    -    695
UN25776        --> GACCATGGTTGCAATCACATTGAATACCAGACACAAAACGATACCTAACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916518       <-- GACCATGGTTGCAATCACATTGAATACCAGACACc...............
EX754787       <-- CACCATGGTTGCAATCACATTGAATACCAGACACAAAACGATACCTAACC
FD561434       <-- GACCATGGTTGCAATCACATTGAATACCAGACACAAAACGATACCTAACC
EV551220       <-- GACCATGGTTGCAATCACATTGAATAGCAGACACAAAACGATACCTAACC
EV566999       <-- GACCATGGTTGCAATCACATTGAATACCAGACACAAAACGATACCTAACC
FD550346       <-- GACCATGGTTGCAATCACATTGAATAGCAGACACAAAACGATACCTAACC
FD540021       <-- GACCATGGTTGCAATCACATTGAATACCAGACACAAAACGATACCTAACC
FD980992       <-- GACCATGGTTGCAATCACATTGAATAGCAGACACAAAACGATACCTAACC
FD966194       <-- GACCATGGTTGCAATCACATTGAATACCAGACACAAAACGATACCTAACC
FD961726       --> GACCATGGTTGCAATCACATTGAATACCAGACACAAAACGATACCTAACC
FD546317       --> ..................................................
EX901124       --> GACCATGGTTGCAATCACATTGAATACCAGACACAAAACGATACCTAACC
EV546358       --> GACCATGGTTGCAATCACATTGAATAGCAGACACAAAACGATACCTAACC
EV572011       --> GACCATGGTTGCAATCACATTGAATACCAGACACAAAACGATACCTAACC
EX759034       --> CACCATGGTTGCAATCACATTGAATACCAGACACAAAACGATACCTAACC
EY912190       --> ..................................................
FD565599       --> GACCATGGTTGCAATCACATTGAATACCAGACACAAAACGATACCTAACC
FD944662       --> ..................................................
FD976791       --> GACCATGGTTGCAATCACATTGAATAGCAGACACAAAACGATACCTAACC
EY937103       --> ..................................................

               695    -    745
UN25776        --> AACTAGCAAAAGCCAGATACTGCAGCTTTTGAGCATGAACTGGTATCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916518       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX754787       <-- AACTAGCAAAAGCCAGATACTGGAGCTTCTGAGCATGAACTGGTATCTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD561434       <-- AACTAGCAAAGGCCAGGTACTGGAGCTTCTGAGCATGAACTGGTATCTCA  Raphanus sativus var. oleiformis
EV551220       <-- AACTAGCAAAAGCCAGATACTGCAGCTTTTGAGCATGAACTGGTATCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566999       <-- AACTAGCAAAGGCCAGGTACTGGAGCTTTTGAGCATGAACTGGTATCTCA  Raphanus raphanistrum subsp. landra
FD550346       <-- AACTAGCAAAAGCCAGATACTGCAGCTTTTGAGCATGAACTGGTATCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD540021       <-- AACTAGCAAAAGCCAGATACTGCAGCTTCTGAGCATGAACTGGTATCTCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980992       <-- AACTAGCAAAAGCCAGATACTGCAGCTTTTGAGCATGAACTGGTATCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD966194       <-- AACTAGCAAAGGCCAGATACTGGAGCTTTTGAGCATGAACTGGTATCTCA  Raphanus raphanistrum subsp. maritimus
FD961726       --> AACT..............................................  Raphanus raphanistrum subsp. maritimus
FD546317       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901124       --> AACTAGCAAAAGCCAGATACTGCAGCTTCTGAGCATGAACTGGTATCTCA  Raphanus sativus cv Early Scarlet Globe
EV546358       --> AACTAGCAAAAGCCAGATACTGCAGCTTTTGAGCATGAACTGGTATCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572011       --> AACTAGCAAAGGCCAGGTACTGGAGCTTTTGAGCATGAACTGGTATCTCA  Raphanus raphanistrum subsp. landra
EX759034       --> AACTAGCAAAAGCCA...................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912190       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565599       --> AACTAGCAAAGGCCAGGTACTGGAGCTTCTGAGCATGAACTGGTATCTCA  Raphanus sativus var. oleiformis
FD944662       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD976791       --> AACTAGCAAAAGCCAGATACTGCAGCTTTTGAGCATGAACTGGTATCTCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY937103       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               745    -    795
UN25776        --> TTAGCAATGTCATGGTGTATGATTGGAAAAAACGGGGGCCAGTTCTTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916518       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX754787       <-- TTAGCAATGTCATGGTGTATGATTGGAAAAAACGGTGGCCAGTTTTTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD561434       <-- TTAGCAATGTCATGGTGTATGATTGGAAAAAACGGGGGCCAGTTCTTCTC  Raphanus sativus var. oleiformis
EV551220       <-- TTAGCAATGTCATGGTGTATGATTGGAAAAAACGGGGGCCAGTTCTTGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV566999       <-- TTAGCAATGTCATGGTGTATGATTGGAAAAAACGAGGGCCAGTTCTTCTC  Raphanus raphanistrum subsp. landra
FD550346       <-- TTAGCAATGTCATGGTGTATGATTGGAAAAAACGGGGGCCAGTTCTTGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD540021       <-- TTAGCAATGTCATGGTGTATGATTGGAAAAAACGGCGGCCAGTTCTTCTC  Raphanus raphanistrum subsp. raphanistrum (MS)
FD980992       <-- TTAGCAATGTCATGGTGTATGATTGGAAAAAACGGGGGCCAGTTCTTGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD966194       <-- TTAGCAATGTCATGGTGTATGATTGGAAAAAACGGGGGCCAGTTCTTCTC  Raphanus raphanistrum subsp. maritimus
FD961726       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD546317       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX901124       --> TTAGCAATGTCATGGTGTATGATTGGA.......................  Raphanus sativus cv Early Scarlet Globe
EV546358       --> TTAGCAATGTCATGGTGTATGATTGGAAAAAACGGGGGCCAGTTCTTGTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV572011       --> TTAGCAATGTCATGGTGTATGATTGGAAAAAACGAGGGCCAGTTCTTCTC  Raphanus raphanistrum subsp. landra
EX759034       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EY912190       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD565599       --> TTAGCAATGTCATGGTGTATGATTGGAAAAA-CGGGGGCCAGTTCTTCTC  Raphanus sativus var. oleiformis
FD944662       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD976791       --> TTAGCAATGTCATGGTGTATGATTGGAAAAAA..................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY937103       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               795    -    845
UN25776        --> ATCTATCTGAACACCAGATTTAGCAATAGCATCCTCTCTCCGTTTAATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916518       <-- ..................................................
EX754787       <-- ATCTATCTGAACACCAGATTTAGCAATAGCATCCTCTCTCCGTTTAATAT
FD561434       <-- ATCTATCTGAACACCAGATTTAGCAATAGCATCCTCTCTCCGTTTAATAT
EV551220       <-- ATCTATCTGAACACCAGATTTAGCAATAGCATCCTCTCTCCGTTTAATAT
EV566999       <-- ATCTATCTGAACACCAGATTTAGCAATAGCATCCTCTCTCCGTTTAATAT
FD550346       <-- ATCTATCTGAACACCAGATTTAGCAATAGCATCCTCTCTCCGTTTAATAT
FD540021       <-- ATCTATCTGAACACCAGATTTAGCAATAGCATCCTCTCTCCGTTTAATAT
FD980992       <-- ATCTATCTGAACACCAGATTTAGCAATAGCATCCTCTCTCCGTTTAATAT
FD966194       <-- ATCTATCTGAACACCAGATTTAGCAATAGCATCCTCTCTCCGTTTAATAT
FD961726       --> ..................................................
FD546317       --> ..................................................
EX901124       --> ..................................................
EV546358       --> ATCTATCTGAACACCAGATTTAGCAATAGCATCCTCTCTCCGTTTAATAT
EV572011       --> ATCTATCTGAACACCAGATTTAGCAATAGCATCCTCTCTCCGTTTAATAT
EX759034       --> ..................................................
EY912190       --> ..................................................
FD565599       --> ATCTATCTGAACACCAGATT..............................
FD944662       --> ..................................................
FD976791       --> ..................................................
EY937103       --> ..................................................

               845    -    895
UN25776        --> CCATTTCTTTCTTCCTAAGCTCAGCTTCCCAGTCAGCAAGCTTTCTCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916518       <-- ..................................................
EX754787       <-- CCATTTCTTTCTTCCTAAGCTCAGCTTCCCAGTCAGCAAGCTTTCTCTGT
FD561434       <-- CCATTTCTTTCTTCCTAAGCTCAGCTTCCCCGTCAGCAAGCTTTCTCTGT
EV551220       <-- CCATTTCTTTCTTCCTAAGCTCAGCTTCCCAGTCAGCAAGCTTTCTCTGT
EV566999       <-- CCATTTCTTTCTTCCTAAGCTCAGCTTCCCAGTCAGCAAGCTTTCTCTGT
FD550346       <-- CCATTTCTTTCTTCCTAAGCTCAGCTTCCCAGTCAGCAAGCTTTCTCTGT
FD540021       <-- CCATTTCTTTCTTCCTAAGCTCAGCTTCCCAGTCAGCAAGCTTTCTCTGT
FD980992       <-- CCATTTCTTTCTTCCTAAGCTCAGCTTCCCAGTCAGCAAGCTTTCTCTGT
FD966194       <-- CCATTTCTTTCTTCCTAAGCTCAGCTTCCCAGTCAGCAAGCTTTCTCTGT
FD961726       --> ..................................................
FD546317       --> ..................................................
EX901124       --> ..................................................
EV546358       --> CCATTTCTTTCTTCCTAAGCTCAGCTTCCCAGTCAGCAAGCTTTCTCTGT
EV572011       --> CCATTTCTTT........................................
EX759034       --> ..................................................
EY912190       --> ..................................................
FD565599       --> ..................................................
FD944662       --> ..................................................
FD976791       --> ..................................................
EY937103       --> ..................................................

               895    -    945
UN25776        --> TTCTGTGAAGAGTCATTCATGTTATCCAAGGGAATATCAACAGTAGCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916518       <-- ..................................................
EX754787       <-- TTCTGTGAAGAGTCATTCATGTTATCCAAGGc..................
FD561434       <-- TTCTGTGAAGAGTCATTCATGTTATCCAAGGGAATATCAACAGTAGCATC
EV551220       <-- TTCTGTGAAGAGTCATTCATGTTATCCAAGGGAATATCAACAGTAGCATC
EV566999       <-- TTCTGTGAAGAGTCATTCGTGTTATCCAAGGGAATATCAACAGTAGCATC
FD550346       <-- TTCTGTGAAGAGTCATTCATGTTATCCAAGGGAATATCAACAGTAGCATC
FD540021       <-- TTCTGTGAAGAGTCATTCATGTTATCCAAGGGAATATCAACAGTAGCATC
FD980992       <-- TTCTGTGAAGAGTCATTCATGTTATCCAAGGGAATATCAACAGTAGCATC
FD966194       <-- TTCTGTGAAGAGTCATTCATGTTATCCAAGGGAATATCAACAGTAGCATC
FD961726       --> ..................................................
FD546317       --> ..................................................
EX901124       --> ..................................................
EV546358       --> TTCTGTGAAGAGTCATTCATGTTATCCAAGGGAATATCAACAGTAGCATC
EV572011       --> ..................................................
EX759034       --> ..................................................
EY912190       --> ..................................................
FD565599       --> ..................................................
FD944662       --> ..................................................
FD976791       --> ..................................................
EY937103       --> ..................................................

               945    -    995
UN25776        --> GAGGCTTTGACCAAATCCAGCTGGCCTAGATGCAGCAGGTACCCGTCCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916518       <-- ..................................................
EX754787       <-- ..................................................
FD561434       <-- GAGGCTTTGACCAAATCCAGCTGGCCTAGATGCAGCAGGTACCCGTCCAC
EV551220       <-- GAGGCTTTGACCAAATCCAGCTGGCCTAGATGCAGCAGGTACCCGTCCAC
EV566999       <-- GAGGCTTTGACCAAATCCAGCTGGCCTAGATGCAGCAGGTACCCGTCCAC
FD550346       <-- GAGGCTTTGACCAAATCCAGCTGGCCTAGATGCAGCAGGTACCCGTCCAA
FD540021       <-- GAGGCTTTGACCAAATCCAGCTGGCCTAGATGCAGCAGGTACCCGTCCAC
FD980992       <-- GAGGCTTTGACCAAATCCAGCTGGCCTAGATGCAGCAGGTACCCGTCCAC
FD966194       <-- AAGGCTTTGACCAAATCCAGCTGGCCTAGATGCAGCAGGTACCCGTCCAC
FD961726       --> ..................................................
FD546317       --> ..................................................
EX901124       --> ..................................................
EV546358       --> GAGGCTT...........................................
EV572011       --> ..................................................
EX759034       --> ..................................................
EY912190       --> ..................................................
FD565599       --> ..................................................
FD944662       --> ..................................................
FD976791       --> ..................................................
EY937103       --> ..................................................

               995    -   1045
UN25776        --> CGCCTTTAGAGAAGGGATTGACGATTTCTTCTTCCTCCTCATCGAAAGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916518       <-- ..................................................
EX754787       <-- ..................................................
FD561434       <-- CGCCTTTAGAGAAGGGATTGACGATTTCTTCTTCCTCCTCATCGAAAGGG
EV551220       <-- CGCCTTTAGAGAAGGGATTGACGATTTCTTCTTCCTCCTCGTCGAAAGGG
EV566999       <-- CGCCTTTAGAGAAGGGATTGACGATTTCTTCTTCCTCCTCATCGAAAGGG
FD550346       <-- CGCCTTTAGAGAAGGGATTGACGATTTCTTCTTCCTCCTCGTCGAAAGGG
FD540021       <-- CGCCTTTAGAGAAGGGATTGACGATTTCTTCTTCCTCCTCATCGAAAGGG
FD980992       <-- CGCCTTTAGAGAAGGGATTGACGATTTCTTCTTCCTCCTCGTCGAAAGGG
FD966194       <-- CGCCTTTAGAGAAGGGATTGACGATTTCTTCTTCCTCCTCATCGAAAGGG
FD961726       --> ..................................................
FD546317       --> ..................................................
EX901124       --> ..................................................
EV546358       --> ..................................................
EV572011       --> ..................................................
EX759034       --> ..................................................
EY912190       --> ..................................................
FD565599       --> ..................................................
FD944662       --> ..................................................
FD976791       --> ..................................................
EY937103       --> ..................................................

               1045   -   1095
UN25776        --> TTGGGATCGTGGTGGCGGTTCATTGTTGATTGCAGATCCCTAGATTCACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916518       <-- ..................................................
EX754787       <-- ..................................................
FD561434       <-- TTGGGATCGTGGTGGCGATTCATTGTTTGTTGCAGATCCCTAGATTCACG
EV551220       <-- TTGGGATCGTGGTGGCGGTTCATTGTTGATTGCAGATCCCTAGATTCACG
EV566999       <-- TTGGGATCGTGGTGGCGGTTCATTGTTGGTTGCAGATCCCTAGATTCACG
FD550346       <-- TTGGGATCGTGGTGc...................................
FD540021       <-- TTGGGATCGTGGTGGCGGTTCATTGTTGATTGCAGATCCCTAGATTCACG
FD980992       <-- TTGGGATCGTGGTGGCGGTTCATTGTTGATTGCAGATCCCTAGATTCACG
FD966194       <-- TTGGGATCGTGGTGGCGGTTCATTGTTGATTGCAGATCCCTAGATTCACG
FD961726       --> ..................................................
FD546317       --> ..................................................
EX901124       --> ..................................................
EV546358       --> ..................................................
EV572011       --> ..................................................
EX759034       --> ..................................................
EY912190       --> ..................................................
FD565599       --> ..................................................
FD944662       --> ..................................................
FD976791       --> ..................................................
EY937103       --> ..................................................

               1095   -   1145
UN25776        --> AACTCGAATCTTACTCTTCCGATAAGATTGCCGAAAAAAAGAGAGAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916518       <-- ..................................................
EX754787       <-- ..................................................
FD561434       <-- AACTCGAATCTTACTCTTCCGATAAGATTGCCGAAAAAAA..........
EV551220       <-- AACTCGAATCTTACTCTTCCGATAAGATTGCCGAAAAAAAGAGAGAGAGA
EV566999       <-- AACTCGAATCTTACTCTTCCGATAAGATTGCCGAAAAAAAGAGAGAGAGA
FD550346       <-- ..................................................
FD540021       <-- AACTCGAATCTTACTCTTCCGATAAGACTGCCGAAAAAAAGAGAGAGAGA
FD980992       <-- AACTCGAATCTTACTCTTCCGATAAGATTGCCGAAAAAAAGAGAGAGAGA
FD966194       <-- AACTCGAATCTTACTCTTCCGATAAGATTGCCGAAAAAAAGAGAGAGAGA
FD961726       --> ..................................................
FD546317       --> ..................................................
EX901124       --> ..................................................
EV546358       --> ..................................................
EV572011       --> ..................................................
EX759034       --> ..................................................
EY912190       --> ..................................................
FD565599       --> ..................................................
FD944662       --> ..................................................
FD976791       --> ..................................................
EY937103       --> ..................................................

               1145   -   1195
UN25776        --> GAGAGAGA-AAAAAAG-ATAGCAAACCGACTGCGTAGGAATCTGTTATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY916518       <-- ..................................................
EX754787       <-- ..................................................
FD561434       <-- ..................................................
EV551220       <-- G.................................................
EV566999       <-- GAGAGAGAgagagag...................................
FD550346       <-- ..................................................
FD540021       <-- GAGAGAGAGAGAAAAG-ATAGCAAACCGACTGCGTAGGAATCTGTTATCC
FD980992       <-- GAGAGAGA-AAAAAAGGATAGCAAACCGACTGCATAGGAAACTGGTATCC
FD966194       <-- GAGAGAGA-A---AAG-ATAGCAAACCGACTGCcc...............
FD961726       --> ..................................................
FD546317       --> ..................................................
EX901124       --> ..................................................
EV546358       --> ..................................................
EV572011       --> ..................................................
EX759034       --> ..................................................
EY912190       --> ..................................................
FD565599       --> ..................................................
FD944662       --> ..................................................
FD976791       --> ..................................................
EY937103       --> ..................................................