1      -     51
UN25802        --> GGGAGCCTCCTCCTCCTCCTTCTCCTCCTCATTTTACAAAACCTCTAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX775401       <-- GGGAGCCTCCTCCTCCTCCTTCTCCTCCTCATTTTACAAAACCTCTAGTT
FD552562       <-- .GGAGCCTCCTCCTCCTCCTTCTCCTCCTCATTTTACAAAACCTCTAGTT
FD974429       <-- .GGAGCCTCCTCCTCCTCCTTCTCCTCCTCATTTTACAAAACCTCTAGTT
EX771345       --> GGGAGCCTCCTCCTCCTCCTTCTCCTCCTCATTTTACAAAACCTCTAGTT
EV551535       --> .GGAGCCTCCTCCTCCTCCTTCTCCTCCTCATTTTACAAAACCTCTAGTT
FD556220       --> .GGAGCCTCCTCCTCCTCCTTCTCCTCCTCATTTTACAAAACCTCTAGTT
FD978119       --> .GGAGCCTCCTCCTCCTCCTTCTCCTCCTCATTTTACAAAACCTCTAGTT

               51     -    101
UN25802        --> CGATCCTCCGTCTCCGTCGAAGTCAACATGGCGCCAAAGAAGGACAAGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX775401       <-- CGATCCTCCGTCTCCGTCGAAGTCAACATGGCGCCAAAGAAGGACAAGGT
FD552562       <-- CGATCCTCCGTCTCCGTCGAAGTCAACATGGCGCCAAAGAAGGACAAGGT
FD974429       <-- CGATCCTCCGTCTCCGTCGAAGTCAACATGGCGCCAAAGAAGGACAAGGT
EX771345       --> CGATCCTCCGTCTCCGTCGAAGTCAACATGGCGCCAAAGAAGGACAAGGT
EV551535       --> CGATCCTCCGTCTCCGTCTAAGTCAACATGGCGCCAAAGAAGGACAAGGT
FD556220       --> CGATCCTCCGTCTCCGTCGAAGTCAACATGGCGCCAAAGAAGGACAAGGT
FD978119       --> CGATCCTCCGTCTCCGTCGAAGTCAACATGGCGCCAAAGAAGGACAAGGT

               101    -    151
UN25802        --> TCCACCACCATCATCAAAGCCAGCGAAATCCGGAGGTGGCAAGCAGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX775401       <-- TCCACCACCATCATCAAAGCCAGCGAAATCCGGAGGTGGCAAGCAGAAGA
FD552562       <-- TCCACCACCATCATCAAAGCCAGCGAAATCCGGAGGTGGCAAGCAGAAGA
FD974429       <-- TCCACCACCATCATCAAAGCCAGCGAAATCCGGAGGTGGCAAGCAGAAGA
EX771345       --> TCCACCACCATCATCAAAGCCAGCGAAATCCGGAGGTGGCAAGCAGAAGA
EV551535       --> TCCACCACCATCATCAAAGCCAGCGAAATCCGGAGGTGGCAAGCAGAAGA
FD556220       --> TCCACCACCATCATCAAAGCCAGCGAAATCCGGAGGTGGCAAGCAGAAGA
FD978119       --> TCCACCACCATCATCAAAGCCAGCGAAATCCGGAGGTGGCAAGCAGAAGA

               151    -    201
UN25802        --> AGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACATGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX775401       <-- AGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACATTGTG
FD552562       <-- AGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACATGGTG
FD974429       <-- AGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACATGGTG
EX771345       --> AGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACATTGTG
EV551535       --> AGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACATGGTG
FD556220       --> AGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACATGGTG
FD978119       --> AGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACATGGTG

               201    -    251
UN25802        --> TTGTTTGATCAGGCTACTTACGACAAGCTTCTCACTGAAGCTCCCAAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX775401       <-- TTGTTTGATCAGGCTACTTACGACAAGCTTCTCACTGAAGCTCCCAAGTT
FD552562       <-- TTGTTTGATCAGGCTACTTACGACAAGCTTCTCACTGAAGCTCCCAAGTT
FD974429       <-- TTGTTTGATCAGGCTACTTACGACAAGCTTCTCACTGAAGCTCCCAAGTT
EX771345       --> TTGTTTGATCAGGCTACTTACGACAAGCTTCTCACTGAAGCTCCCAAGTT
EV551535       --> TTGTTTGATCAGGCTACTTACGACAAGCTTCTCACTGAAGCTCCCAAGTT
FD556220       --> TTGTTTGATCAGGCTACTTACGACAAGCTTCTCACTGAAGCTCCCAAGTT
FD978119       --> TTGTTTGATCAGGCTACTTACGACAAGCTTCTCACTGAAGCTCCCAAGTT

               251    -    301
UN25802        --> CAAGCTCATCACTCCTTCCATTCTCTCCGACCGTATGAGGATTAACGGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX775401       <-- CAAGCTCATCACTCCTTCCATTCTCTCCGACCGTATGAGGATTAACGGGT
FD552562       <-- CAAGCTCATCACTCCTTCCATTCTCTCCGACCGTATGAGGATCAACGGGT
FD974429       <-- CAAGCTCATCACTCCTTCCATTCTTTCCGACCGTATGAGGATTAACGGGT
EX771345       --> CAAGCTCATCACTCCTTCCATTCTCTCCGACCGTATGAGGATTAACGGGT
EV551535       --> CAAGCTCATCACTCCTTCCATTCTCTCCGACCGTATGAGGATTAACGGGT
FD556220       --> CAAGCTCATCACTCCTTCCATTCTCTCCGACCGTATGAGGATCAACGGGT
FD978119       --> CAAGCTCATCACTCCTTCCATTCTCTCCGACCGTATGAGGATTAACGGGT

               301    -    351
UN25802        --> CTCTAGCAAGGAGAGCGATTAGGGAGCTAATGGCGAAGGGTGTGATCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX775401       <-- CTCTAGCAAGGAGAGCGATTAGGGAGCTAATGGCGAAGGGTGTGATCAGG
FD552562       <-- CTCTAGCAAGGAGAGCGATTAGGGATCTAATGGCGAAGGGTGTGATCAGG
FD974429       <-- CTCTAGCAAGGAGAGCGATTAGGGAGCTAATGGCGAAGGGTGTGATCAGG
EX771345       --> CTCTAGCAAGGAGAGCGATTAGGGAGCTAATGGCGAAGGGTGTGATCAGG
EV551535       --> CTCTAGCAAGGAGAGCGATTAGGGAGCTAATGGCGAAGGGTGTGATCAGG
FD556220       --> CTCTAGCAAGGAGAGCGATTAGGGATCTAATGGCGAAGGGTGTGATCAGG
FD978119       --> CTCTAGCAAGGAGAGCGATTAGGGAGCTAATGGCGAAGGGTGTGATCAGG

               351    -    401
UN25802        --> ATGGTCGCTGCTCATTCGAGCCAGCAGATCTACACTCGTGCCACAAACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX775401       <-- ATGGTCGCTGCTCATTCGAGCCAGCAGATCTACACTCGTGCCACAAACAC  Raphanus raphanistrum subsp. landra
FD552562       <-- ATGGTCGCTGCTCATTCGAGCCAGCAGATCTACACTCGTGCCACAAACAC  Raphanus raphanistrum subsp. landra
FD974429       <-- ATGGTCGCTGCTCATTCGAGCCAGCAGATCTACACTCGTGCCACCAACAC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX771345       --> ATGGTCGCTGCTCATTCGAGCCAGCAGATCTACACTCGTGCCACAAACAC  Raphanus raphanistrum subsp. landra
EV551535       --> ATGGTCGCTGCTCATTCGAGCCAGCAGATCTACACTCGTGCCACCAACAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD556220       --> ATGGTCGCTGCTCATTCGAGCCAGCAGATCTACACTCGTGCCACAAACAC  Raphanus raphanistrum subsp. landra
FD978119       --> ATGGTCGCTGCTCATTCGAGCCAGCAGATCTACACTCGTGCCACCAACAC  Raphanus raphanistrum subsp. raphanistrum (NY)

               401    -    451
UN25802        --> CTAAGAATGTTTTTTTT--GGTTTTTGATCCGGCTTGGCCGTGGACTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX775401       <-- CTAAGAATGTTTTTTTT--GGTTTTTGATCCGGCTTGGCCGTGGACTTGT
FD552562       <-- CTAAGAATGTTTTTTTT--GGTTTTTGATCCGGCTTGGCCGTGGACTTGT
FD974429       <-- CTAAGAATGTTTTTTTTTTGGTTTTTGATCCGGCT-GGCCGTGGACTTGT
EX771345       --> CTAAGAATGTTTTTTTT--GGTTTTTGATCCGGCTTGGCCGTGGACTTGT
EV551535       --> CTAAGAATGTTTTTTTT--GGTTTTTGATCCGGCTTGGCCGTGGACTTGT
FD556220       --> CTAAGAATGTTTTTTTT--GGTTTTTGATCCGGCTTGGCCGTGGACTTGT
FD978119       --> CTAAGAATGTTTTTTTTTTGGTTTTTGATCCGGCT-GGCCGTGGACTTGT

               451    -    501
UN25802        --> TTCTTATTATCTCCTTTGTTTGGTTCCTTCAGTAACTCGTTTAGAATCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX775401       <-- TTCTTATTATCTCCTTTGTTTGGTTCCTTCAGTAACTCGTTTAGAATCTT
FD552562       <-- TTCTTATTATCTCCTTTGTTTGGTTCCTTCAGTAACTCGTTTAGAATCTT
FD974429       <-- TTCTTATTATCTCCTTTGTTTGGTTCCTTCAGTAACTCGTTTAGAATCTT
EX771345       --> TTCTTATTATCTCCTTTGTTTGGTTCCTTCAGTAACTCGTTTAGAATCTT
EV551535       --> TTCTTATTATCTCCTTTGTTTGGTTCCTTCAGTAACTCGTTTAGAATCTT
FD556220       --> TTCTTATTATCTCCTTTGTTTGGTTCCTTCAGTAACTCGTTTAGAATCTT
FD978119       --> TTCTTATTATCTCCTTTGTTTGGTTCCTTCAGTAACTCGTTTAGAATCTT

               501    -    551
UN25802        --> GTTTTCAGATATTTTGAGCAATGCATTGCGACTATTAAATTAAATCCGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX775401       <-- GTTTTCAGATATTTTGAGCA..............................
FD552562       <-- GTTTTCAGATATTTTGAGCAATGCATTGCGACTATT..............
FD974429       <-- GTTTTCAGATATTTTGAGCAATGCATTGCGACTATTAAATTAAATCg...
EX771345       --> GTTTTCAGATATTTTGAGCAATGCATTGCGACTATTAAATTAAATCCGAC
EV551535       --> GTTTTCAGATATTTTGAGCAATGCATTGCGACTATTAAATTAt.......
FD556220       --> GTTTTCAGATATTTTGAGCAATGCATTGCGACTATT..............
FD978119       --> GTTTTCAGATATTTTGAGCAATGCATTGCGACTATTAAATTAAATCg...

               551    -    601
UN25802        --> CATTGGCGTCT
                   ~~~~~~~~~~~
EX775401       <-- ...........
FD552562       <-- ...........
FD974429       <-- ...........
EX771345       --> CATTGGCGTCT
EV551535       --> ...........
FD556220       --> ...........
FD978119       --> ...........