RadishBase

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Alignment for radish unigene UN26187

               1      -     51
UN26187        --> GGGGCGTTCGTTTCAGGATTCTCTGAGAACTGAGAAGCAAATCGCAGCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891699       <-- ..................................................
EX899422       <-- ..................................................
EX901727       <-- ..................................................
EX776891       <-- ..................................................
FD975921       <-- ..................................................
FD935069       <-- ..................................................
EV546162       <-- ..................................................
FD982545       <-- ..................................................
EV550975       --> GGGGCGTTCGTTTCATTATTCTCTGAGAACTGAGAAGCAAATCGCAGCGG
EX895255       --> ...............GGATTCTCTGAGAACTGAGAAGCAAATCGCAGCGG
EX898099       --> ...............GGATTCTCTGAGAACTGAGAAGCAAATCGCAGCGG
FD979953       --> ...............GGATTCTCTGAGAACTGAGAAGCAAATCGCAGCGG
FD986267       --> ...............GGATTCTCTGAGAACTGAGAAGCAAATCGCAGCGG
FD938786       --> ......................ggGAGGACTGAGAAGCAAATCGCAGCGG
FY449398       --> ..................................................
EX887581       --> ..................................................
FY451024       --> ..................................................
EX773045       --> ..................................................
FD562933       --> ..................................................

               51     -    101
UN26187        --> ACGACGGTTCTCGGCGTGTATAGGCGTCGCGGTTTACTTTCTGTTAACGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891699       <-- ..................................................
EX899422       <-- ..................................................
EX901727       <-- ..................................................
EX776891       <-- ..................................................
FD975921       <-- ..................................................
FD935069       <-- ..................................................
EV546162       <-- ..................................................
FD982545       <-- ..................................................
EV550975       --> ACGACGGTTCTCGGCGTGTATAGGCGTCGCGGTTTACTTTCTGTTAACGA
EX895255       --> ACGACGGTTCTCGGCGTGTATAGGCGTCGCGGTTTACTTTCTGTTAACGA
EX898099       --> ACGACGGTTCTCGGCGTGTATAGGCGTCGCGGTTTACTTTCTGTTAACGA
FD979953       --> ACGACGGTTCTCGGCGTGTATAGGCGTCGCGGTTTACTTTCTGTTAACGA
FD986267       --> ACGACGGTTCTCGGCGTGTATAGGCGTCGCGGTTTACTTTCTGTTAACGA
FD938786       --> ACGACGGTTCTCGGCGTGTATAGGCGTCGCGGTTTACTTTCTGTTAACGA
FY449398       --> ......GTTCTCGGCGTGTATAGGCGTCGCGGTTTACTTTCCGTTAACGA
EX887581       --> .......TTCTCGGCGTGTATAGGCGTCGCGGTTTACTTTCTGTTAACGA
FY451024       --> .......TTCTCGGCGTGTATAGGCGTCGCGGTTTACTTTCTGTTAACGA
EX773045       --> ..................................................
FD562933       --> ..................................................

               101    -    151
UN26187        --> TCGGCTTCTCCTCGGTTACCTGATCACTCCCTCTGTCTACTCTCTCTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891699       <-- ..................................................
EX899422       <-- ..................................................
EX901727       <-- ..................................................
EX776891       <-- ..................................................
FD975921       <-- ..................................................
FD935069       <-- ..................................................
EV546162       <-- ..................................................
FD982545       <-- ..................................................
EV550975       --> TCGGCTTCTCCTCGGTTACCTGATCACTCCCTCTGTCTACTCTCTCTATC
EX895255       --> TCGGCTTCTCCTCGGTTACCTGATCACTCCCTCTGTCTACTCTCTCTATC
EX898099       --> TCGGCTTCTCCTCGGTTACCTGATCACTCCCTCTGTCTACTCTCTCTATC
FD979953       --> TCGGCTTCTCCTCGGTTACCTGATCACTCCCTCTGTCTACTCTCTCTATC
FD986267       --> TCGGCTTCTCCTCGGTTACCTGATCACTCCCTCTGTCTACTCTCTCTATC
FD938786       --> TCGGCTTCTCCTCGGTTACCTGATCACTCCCTCTGTCTACTCTCTCTATC
FY449398       --> TCGGCTTCTCCTCGGTTACCTGATCACTCCCTCTGTCTACTCTCTCTATC
EX887581       --> TCGGCTTCTCCTCGGTTACCTGATCACTCCCTCTGTCTACTCTCTCTATC
FY451024       --> TCGGCTTCTCCTCGGTTACCTGATCACTCCCTCTGTCTACTCTCTCTATC
EX773045       --> ..................................................
FD562933       --> ..................................................

               151    -    201
UN26187        --> TTCAATCATCAGTCCATCGCTGTCATCTCTCTTTCAAGCTTCTCTGAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891699       <-- ..................................................
EX899422       <-- ..................................................
EX901727       <-- ..................................................
EX776891       <-- ..................................................
FD975921       <-- ..................................................
FD935069       <-- ..................................................
EV546162       <-- ..................................................
FD982545       <-- ..................................................
EV550975       --> TTCA-TCATCAGTCCATCGCTGTCATCTCTCTTTCAAGCTTCTCTGAGTG
EX895255       --> TTCAATCATCAGTCCATCGCTGTCATCTCTCTTTCAAGCTTCTCTGAGTG
EX898099       --> TTCAATCATCAGTCCATCGCTGTCATCTCTCTTTCAAGCTTCTCTGAGTG
FD979953       --> TTCA-TCATCAGTCCATCGCTGTCAACTCTCTTTCAAGCTTCTCTGAGTG
FD986267       --> TTCAATCATCAGTCCATCGCTGTCATCTCTCTTTCAAGCTTCTCTGAGTG
FD938786       --> TTCAATCATCAGTCCATCGCTGTCATCTCTCTTTCAAGCTTCTCTGAGTG
FY449398       --> TTCAATCATCAGTCCATCGCTGTCATCTCTCTTTCAAGCTTCTCTGAGTG
EX887581       --> TTCAATCATCAGTCCATCGCTGTCATCTCTCTTTCAAGCTTCTCTGAGTG
FY451024       --> TTCAATCATCAGTCCATCGCTGTCATCTCTCTTTCAAGCTTCTCTGAGTG
EX773045       --> ..................................................
FD562933       --> ..................................................

               201    -    251
UN26187        --> CGAGTTGGTCAACAGCAGGATACTGTAGCAATACTGAACAAGATGGATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891699       <-- ..................................................
EX899422       <-- ..................................................
EX901727       <-- ..................................................
EX776891       <-- ..................................................
FD975921       <-- ..................................................
FD935069       <-- ..................................................
EV546162       <-- ..................................................
FD982545       <-- ..................................................
EV550975       --> CGAGTTGGTCAACAGCAGGATACTGTAGCAATACTGAACAAGATGGATCA
EX895255       --> CGAGTTGGTCAACAGCAGGATACTGTAGCAATACTGAACAAGATGGATCA
EX898099       --> CGAGTTGGTCAACAGCAGGATACTGTAGCAATACTGAACAAGATGGATCA
FD979953       --> CGAGTTGGTCAACAGCAGGATACTGTAGCAATACTGAACAAGATGGATCA
FD986267       --> TGAGTTGGTCAACAGCAGGATACTGTAGCAATACTGAACAAGATGGATCA
FD938786       --> CGAGTTGGTCAACAGCAGGATACTGTAGCAATACTGAACAAGATGGATCA
FY449398       --> CGAGTTGGTCAACAGCAGGATACTGTAGCAATACTGAACAAGATGGATCA
EX887581       --> CGAGTTGGTCAACAGCAGGATACTGTAGCAATACTGAACAAGATGGATCA
FY451024       --> CGAGTTGGTCAACAGCAGGATACTGTAGCAATACTGAACAAGATGGATCA
EX773045       --> ..................................................
FD562933       --> ..................................................

               251    -    301
UN26187        --> TGAAAATGGATATGGTGTGGAAGTCACTGGGCTATCTCCAGCCGTTACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891699       <-- ..................................................
EX899422       <-- ..................................................
EX901727       <-- ..................................................
EX776891       <-- ..................................................
FD975921       <-- ..................................................
FD935069       <-- ..................................................
EV546162       <-- ..................................................
FD982545       <-- ..................................................
EV550975       --> TGAAAATGGATATGGTGTGGAAGTCACTGGGCTATCTCCAGCCGTTACTG
EX895255       --> TGAAAATGGATATGGTGTGGAAGTCACTGGGCTATCTCCAGCCGTTACTG
EX898099       --> TGAAAATGGATATGGTGTGGAAGTCACTGGGCTATCTCCAGCCGTTACTG
FD979953       --> TGAAAATGGATATGGTGTGGAAGTCACTGGGCTATCTCCAGCCGTTACTG
FD986267       --> TGAAAATGGATATGGTGTGGAAGTCACTGGGCTATCTCCAGCCGTTACTG
FD938786       --> TGAAAATGGATATGGTGTGGAAGTCACTGGGCTATCTCCAGCCGTTACTG
FY449398       --> TGAAAATGGATATGGTGTGGAAGTCACTGGGCTATCTCCAGCCGTTACTG
EX887581       --> TGAAAATGGATATGGTGTGGAAGTCGCTGGGCTATCTCCAGCCGTTACTG
FY451024       --> TGAAAATGGATATGGTGTGGAAGTCACTGGGCTATCTCCAGCCGTTACTG
EX773045       --> ..................................................
FD562933       --> ..................................................

               301    -    351
UN26187        --> AGAAAGATCTCATCGACTTCTTCTCCTTCTCTGGTGCAATCCAACATATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891699       <-- ..................................................  Raphanus sativus var. oleiformis
EX899422       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX901727       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EX776891       <-- ..................................................  Raphanus raphanistrum subsp. landra
FD975921       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD935069       <-- ..................................................  Raphanus sativus var. oleiformis
EV546162       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982545       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV550975       --> AGAAAGATCTCATCGACTTCTTCTCCTTCTCTGGTTCAATCGAACATATT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX895255       --> AGAAAGATCTCATCGACTTCTTCTCCTTCTCTGGTGCAATCCAACATATT  Raphanus sativus cv Early Scarlet Globe
EX898099       --> AGAAAGATCTCATCGACTTCTTCTCCTTCTCTGGTGCAATCCAACATATT  Raphanus sativus cv Early Scarlet Globe
FD979953       --> AGAAAGATCTCATCGACTTCTTCTCCTTCTCTGGTTCAATCGAACATATT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986267       --> AGAAAGATCTCATCGACTTCTTCTCCTTCTCTGGTGCAATCCAACATATT  Raphanus raphanistrum subsp. landra
FD938786       --> AGGAAGATCTCATCGACTTCTTCTCCTTCTCTGGTGCAATCGAACATATT  Raphanus sativus var. oleiformis
FY449398       --> AGAAAGATCTCATCGACTTCTTCTCCTTCTCTGGTGCAATCCAACATATT  Raphanus sativus cv GSK3-1
EX887581       --> AGAAAGATCTCATCGACTTCTTCTCCTTCTCTGGTGCAATCGAACATATT  Raphanus sativus var. oleiformis
FY451024       --> AGAAAGATCTCATCGACTTCTTCTCCTTCTCTGGTGCAATCCAACATATT  Raphanus sativus cv GSK3-1
EX773045       --> ..................................................  Raphanus raphanistrum subsp. landra
FD562933       --> ..................................................  Raphanus sativus var. oleiformis

               351    -    401
UN26187        --> GATATTGTCAGGTCGGGTGAGCAAGCGTGCACTGCGTATGTGATGTTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891699       <-- ...atcGTCAGGTCGGGCGAGCAAGCGTGCACTGCGTATGTGATGTTCAA
EX899422       <-- ............TCGGGTGAGCAAGCGTGCACTGCGTATGTGATGTTCAA
EX901727       <-- ..............GGGTGAGCAAGCGTGCACTGCGTATGTGATGTTCAA
EX776891       <-- ..................................................
FD975921       <-- ..................................................
FD935069       <-- ..................................................
EV546162       <-- ..................................................
FD982545       <-- ..................................................
EV550975       --> GATATTGTCAGGTCGGGTGAGCAAGCGTGCACTGCGTATGTGATGTTCAA
EX895255       --> GATATTGTCAGGTCGGGTGAGCAAGCGTGCACTGCGTATGTGATGTTCAA
EX898099       --> GATATTGTCAGGTCGGGTGAGCAAGCGTGCACTGCGTATGTGATGTTCAA
FD979953       --> GATATTGTCAGGTCGGGTGAGCAAGCGTGCACTGCGTATGTGATGTTCAA
FD986267       --> GATATTGTCAGGTCGGGTGAGCAAGCGTGCACTGCGTATGTGATGTTCAA
FD938786       --> GACATCGTCAGGTCGGGTGAGCAAGCGTGCACTGCGTATGTGATGTTCAA
FY449398       --> GATATTGTCAGGTCGGGTGAGCAAGCGTGCACTGCGTATGTGATGTTCAA
EX887581       --> GACATCGTCAGGTCGGGCGAGCAAGCGTGCACTGCGTATGTGATGTTCAA
FY451024       --> GATATTGTCAGGTCGGGTGAGCAAGCGTGCACTGCGTATGTGATGTTCAA
EX773045       --> ..................................................
FD562933       --> ..................................................

               401    -    451
UN26187        --> GGATTCTTACTCTCAGGAAACTGCCGTCTTACTCAGTGGGGCAACCATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891699       <-- GGATTCTTACTCTCAGGAAACTGCCGTCTTACTCAGTGGGGCAACCATAT
EX899422       <-- GGATTCTTACTCTCAGGAAACTGCCGTCTTACTCAGTGGGGCAACCATAT
EX901727       <-- GGATTCTTACTCTCAGGAAACTGCCGTCTTACTCAGTGGGGCAACCATAT
EX776891       <-- ...gTCTTACTCTCAGGAAACTGCCGTCTTACTCAGTGGGGCAACCATAT
FD975921       <-- ...............................................TAT
FD935069       <-- ..................................................
EV546162       <-- ..................................................
FD982545       <-- ..................................................
EV550975       --> GGATTCTTACTCTCAGGAAACTGCCGTCTTACTCAGTGGGGCAACCATAT
EX895255       --> GGATTCTTACTCTCAGGAAACTGCCGTCTTACTCAGTGGGGCAACCATAT
EX898099       --> GGATTCTTACTCTCAGGAAACTGCCGTCTTACTCAGTGGGGCAACCATAT
FD979953       --> GGATTCTTACTCTCAGGAAACTGCCGTCTTACTCAGTGGGGCAACCATAT
FD986267       --> GGATTCTTACTCTCAGGAAACTGCCGTCTTACTCAGTGGGGCAACCATAT
FD938786       --> GGATTCTTACTCTCAGGAAACTGCCGTCTTACTCAGTGGGGCAACCATAT
FY449398       --> GGATTCTTACTCTCAGGAAACTGCCGTCTTACTCAGTGGGGCAACCATAT
EX887581       --> GGATTCTTACTCTCAGGAAACTGCCGTCTTACTCAGTGGGGCAACCATAT
FY451024       --> GGATTCTTACTCTCAGGAAACTGCCGTCTTACTCAGTGGGGCAACCATAT
EX773045       --> ...gTCTTACTCTCAGGAAACTGCCGTCTTACTCAGTGGGGCAACCATAT
FD562933       --> ..................................................

               451    -    501
UN26187        --> TGGAGCAGCGAGTTTGCATAACTCGTTGGGGACAGCATCACGAGGAGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891699       <-- TGGAGCAGCGAGTTTGCATAACTCGTTGGGGACAGCATCACGAGGAGTTT
EX899422       <-- TGGAGCAGCGAGTTTGCATAACTCGTTGGGGACAGCATCACGAGGAGTTT
EX901727       <-- TGGAGCAGCGAGTTTGCATAACTCGTTGGGGACAGCATCACGAGGAGTTT
EX776891       <-- TGGAGCAGCGAGTTTGCATAACTCGTTGGGGACAGCATCACGAGGAGTTT
FD975921       <-- TGGAGCAGCGAGTTTGCATAACTCGTTGGGGACAGCATCACGAGGAGTTT
FD935069       <-- ..................................................
EV546162       <-- ..................................................
FD982545       <-- ..................................................
EV550975       --> TGGAGCAGCGAGTTTACATAACTCGTTGGGGACAGCATCACGAGGAGTTT
EX895255       --> TGGAGCAGCGAGTTTGCATAACTCGTTGGGGACAGCATCACGAGGAGTTT
EX898099       --> TGGAGCAGCGAGTTTGCATAACTCGTTGGGGACAGCATCACGAGGAGTTT
FD979953       --> TGGAGCAGCGAGTTTGCATAACTCGTTGGGGACAGCATCACGAGGAGTTT
FD986267       --> TGGAGCAGCGAGTTTGCATAACTCGTTGGGGACAGCATCACGAGGAGTTT
FD938786       --> TGGAGCAGCGAGTTTGCATAACTCGTTGGGGACAGCATCACGAGGAGTTT
FY449398       --> TGGAGCAGCGAGTTTGCATAACTCGTTGGGGACAGCATCACGAGGAGTTT
EX887581       --> TGGAGCAGCGAGTTTGCATAACTCGTTGGGGACAGCATCACGAGGAGTTT
FY451024       --> TGGAGCAGCGAGTTTGCATAACTCGTTGGGGACAGCATCACGAGGAGTTT
EX773045       --> TGGAGCAGCGAGTTTGCATAACTCGTTGGGGACAGCATCACGAGGAGTTT
FD562933       --> ..................................................

               501    -    551
UN26187        --> GACTTCTGGAACGCCACTCAGCGGGGTTTTGTAGATGACACAAACTCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891699       <-- GACTTCTGGAACGCGACTCAGCGGGGTTTTGTTGACGACACAAACTCACA
EX899422       <-- GACTTCTGGAACGCCACTCAGCGGGGTTTTGTAGATGACACAAACTCACA
EX901727       <-- GACTTCTGGAACGCCACTCAGCGGGGTTTTGTAGATGACACAAACTCACA
EX776891       <-- GACTTCTGGAACGCCACTCAGCGGGGTTTTGTAGATGACACAAACTCACA
FD975921       <-- GACTTCTGGAACGCCACTCAGCGGGGTTTTGTAGATGACACAAACTCACA
FD935069       <-- ..................................................
EV546162       <-- ..................................................
FD982545       <-- ..................................................
EV550975       --> GACTTCTGGAACGCCACTCAGCGGGGTTTTGTAGATGACACAAACTCACA
EX895255       --> GACTTCTGGAACGCCACTCAGCGGGGTTTTGTAGATGACACAAACTCACA
EX898099       --> GACTTCTGGAACGCCACTCAGCGGGGTTTTGTAGATGACACAAACTCACA
FD979953       --> GACTTCTGGAACGCCACTCAGCGGGGTTTTGTAGATGACACAAACTCACA
FD986267       --> GACTTCTGGAACGCCACTCAGCGGGGTTTTGTAGATGACACAAACTCACA
FD938786       --> GACTTCTGGAACGCGACTCAGCGGGGTTTTGTTGACGACACAAACTCACA
FY449398       --> GACTTCTGGAACGCCACTCAGCGGGGTTTTGTAGATGACACAAACTCACA
EX887581       --> GACTTCTGGAACGCGACTCAGCGGGGTTTTGTTGACGACACAAACTCACA
FY451024       --> GACTTCTGGAACGCCACTCAGCGGGGTTTTGTAGATGACACAAACTCACA
EX773045       --> GACTTCTGGAACGCCACTCAGCGGGGTTTTGTAGATGACACAAACTCACA
FD562933       --> ..................................................

               551    -    601
UN26187        --> TCCTCATCCCCAACGAGGCGAGTTCAACGCCGGAGAAGCAGTGACAAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891699       <-- CGCTCATCCCCAACGAGGCGAGTTCAACGCCGGAGAAGCAGTGACAAAAG
EX899422       <-- TCCTCATCCCCAACGAGGCGAGTTCAACGCCGGAGAAGCAGTGACAAAAG
EX901727       <-- TCCTCATCCCCAACGAGGCGAGTTCAACGCCGGAGAAGCAGTGACAAAAG
EX776891       <-- TCCTCATCCCCAACGAGGCGAGTTCAACGCCGGAGAAGCAGTGACAAAAG
FD975921       <-- TCCTCATCCTCAACGAGGCGAGTTCAACGCCGGAGAAGCAGTGACAAAAG
FD935069       <-- ..................................................
EV546162       <-- ..................................................
FD982545       <-- ..................................................
EV550975       --> TCCTCATCCTCAACGAGGCGAGTTCAACGCCGGAGAAGCAGTGACAAAAG
EX895255       --> TCCTCATCCCCAACGAGGCGAGTTCAACGCCGGAGAAGCAGTGACAAAAG
EX898099       --> TCCTCATCCCCAACGAGGCGAGTTCAACGCCGGAGAAGCAGTGACAAAAG
FD979953       --> TCCTCATCCTCAACGAGGCGAGTTCAACGCCGGAGAAGCAGTGACAAAAG
FD986267       --> TCCTCATCCCCAACGAGGCGAGTTCAACGCCGGAGAAGCAGTGACAAAAG
FD938786       --> CGCTCATCCCCAACGAGGCGAGTTCAACGCCCGAGAAGCAGTGACAAAAG
FY449398       --> TCCTCATCCCCAACGAGGCGAGTTCAACGCCGGAGAAGCAGTGACAAAAG
EX887581       --> CGCTCATCCCCAACGAGGCGAGTTCAACGCCGGAGAAGCAGTGACAAAAG
FY451024       --> TCCTCATCCCCAACGAGGCGAGTTCAACGCCGGAGAAGCAGTGACAAAAG
EX773045       --> TCCTCATCCCCAACGAGGCGAGTTCAACGCCGGAGAAGCAGTGACAAAAG
FD562933       --> ..................................................

               601    -    651
UN26187        --> CTCAAGAAGTGGTGAAGTCAATGCTAGCCACCGGATTCGTGCTGGGCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891699       <-- CTCAAGAAGTGGTGAGGACAATGCTAGCCACCGGATTCGTGCTGGGGAAA  Raphanus sativus var. oleiformis
EX899422       <-- CTCAAGAAGTGGTGAAGTCAATGCTAGCCACCGGATTCGTGCTGGGCAAA  Raphanus sativus cv Early Scarlet Globe
EX901727       <-- CTCAAGAAGTGGTGAAGTCAATGCTAGCCACCGGATTCGTGCTGGGCAAA  Raphanus sativus cv Early Scarlet Globe
EX776891       <-- CTCAAGAAGTGGTGAAGTCAATGCTAGCCACCGGATTCGTGCTGGGCAAA  Raphanus raphanistrum subsp. landra
FD975921       <-- CTCAAGAAGTGGTGAGAACAATGCTGGCCACCGGATTCGTGCTGGGCAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD935069       <-- ...........................................GGGGAAA  Raphanus sativus var. oleiformis
EV546162       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982545       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV550975       --> CTCAAGAAGTGGTGAGAACAATGCTGGCCACCGGATTCGTGCTGGGCAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EX895255       --> CTCAAGAAGTGGTGAAGTCAATGCTAGCCACCGGATTCGTGCTGGGCAAA  Raphanus sativus cv Early Scarlet Globe
EX898099       --> CTCAAGAAGTGGTGAAGTCAATGCTAGCCACCGGATTCGTGCTGGGCAAA  Raphanus sativus cv Early Scarlet Globe
FD979953       --> CTCAAGAAGTGGTGAGAACAATGCTGGCCACCGGATTCGTGCTGGGCAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986267       --> CTCAAGAAGTGGTTAAGTCAATGCTAGCCACCGGATTCGTGCTGGGCAAA  Raphanus raphanistrum subsp. landra
FD938786       --> CTCAAGAAGTGGTGAGAACAATGCTAGCCACCGGATTCGTGCTGGGgaa.  Raphanus sativus var. oleiformis
FY449398       --> CTCAAGAAGTGGTGAAGTCAATGCTAGCCACCGGATTCGTGCTGGGCAAA  Raphanus sativus cv GSK3-1
EX887581       --> CTCAAGAAGTGGTGAGGACAATGCTAGCCACCGGATTCGTGCTGGGGAAA  Raphanus sativus var. oleiformis
FY451024       --> CTCAAGAAGTGGTGAAGTCAATGCTAGCCACCGGATTCGTGCTGGGCAAA  Raphanus sativus cv GSK3-1
EX773045       --> CTCAAGAAGTGGTGAAGTCAATGCTAGCCACCGGATTCGTGCTGGGCAAA  Raphanus raphanistrum subsp. landra
FD562933       --> ..................................................  Raphanus sativus var. oleiformis

               651    -    701
UN26187        --> GACGCTTTAGCCAAAGCTAAAGGCTTTGACGAATCCCACGGTGTATCGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891699       <-- GACGCTTTAGCCAAAGCTAAAGGCTTCGACGAATCCCACGGTGTATCGGC  Raphanus sativus var. oleiformis
EX899422       <-- GACGCTTTAGCCAAAGCTAAAGGCTTTGACGAATCCCACGGCGTATCGGC  Raphanus sativus cv Early Scarlet Globe
EX901727       <-- GACGCTTTAGCCAAAGCTAAAGGCTTTGACGAATCCCACGGTGTATCGGC  Raphanus sativus cv Early Scarlet Globe
EX776891       <-- GACGCTTTAGCCAAAGCTAAAGGCTTTGACGAATCCCACGGTGTATCGGC  Raphanus raphanistrum subsp. landra
FD975921       <-- GACGCTTTAGCCAAAGCTAAAGGCTTCGACGAATCCCACGGTGTATCGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD935069       <-- GACGCTTTAGCCAAAGCTAAAGGCTTCGACGAATCCCACGGTGTATCGGC  Raphanus sativus var. oleiformis
EV546162       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982545       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV550975       --> GACGCTTTAGCCAAAGCTAAAGGCTTCGACGAATCCCACGGTGTATCGGC  Raphanus raphanistrum subsp. raphanistrum (NY)
EX895255       --> GACGCTTTAGCCAAAGCTAAAGGCTTTGACGAATCCCACGGCGTATCGGC  Raphanus sativus cv Early Scarlet Globe
EX898099       --> GACGCTTTAGCCAAAGCTAAAGGCTTTGACGAATCCCACGGTGTATCGGC  Raphanus sativus cv Early Scarlet Globe
FD979953       --> GACGCTTTAGCCAAAGCTAA-GGCTTCGAC....................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986267       --> GACGCTTTAGCCAAAGCTAAAGGCTTTGACGA-TCCCACGGTGTATCGGC  Raphanus raphanistrum subsp. landra
FD938786       --> ..................................................  Raphanus sativus var. oleiformis
FY449398       --> GACGCTTTAGCCAAAGCTAAAGGCTTTGACGAATCCCACGGTGTATCGGC  Raphanus sativus cv GSK3-1
EX887581       --> GACGCTTTAGCCAAAGCTAAAGGCTTCGACGAATCCCACGGTGTATCGGC  Raphanus sativus var. oleiformis
FY451024       --> GACGCTTTAGCCAAAGCTAAAGGCTTTGACGAATCCCACGGTGTATCGGC  Raphanus sativus cv GSK3-1
EX773045       --> GACGCTTTAGCCAAAGCTAAAGGCTTTGACGAATCCCACGGTGTATCGGC  Raphanus raphanistrum subsp. landra
FD562933       --> ..................................................  Raphanus sativus var. oleiformis

               701    -    751
UN26187        --> TGCAGCAGCGGCTAGAGTATCTCAACTAGACCAGAGGATCGGTCTCACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891699       <-- TGCAGCAGCGGCTAGAGTATCTCAACTAGACCAGAGGATCGGTCTCACTG
EX899422       <-- TGCAGCAGCGGCTAGAGTATCTCAACTAGACCAGAGGATCGGTCTCACTG
EX901727       <-- TGCAGCAGCGGCTAGAGTATCTCAACTAGACCAGAGGATCGGTCTCACTG
EX776891       <-- TGCAGCAGCGGCTAGAGTATCTCAACTAGACCAGAGGATCGGTCTCACTG
FD975921       <-- TGCAGCAGCGGCTAGAGTATCTCAACTAGACCAGAGGATCGGTCTCACTG
FD935069       <-- TGCAGCAGCGGCTAGAGTATCTCAACTAGACCAGAGGATCGGTCTCACTG
EV546162       <-- ..................................................
FD982545       <-- ..................................................
EV550975       --> TGCAGCAGCGGCTAGAGTATCTCAACTAGACCAGAGGATCGGTCTCACTG
EX895255       --> TGCAGCAGCGGCTAGAGTATCTCAACTAGACCAGAGGATCGGTCTCACTG
EX898099       --> TGCAGCAGCGGCTAGAGTATCTCA-CTAGACCAGAG..............
FD979953       --> ..................................................
FD986267       --> TGCAGCAGCGGCTAGAGTATCTCA-CTAGACC..................
FD938786       --> ..................................................
FY449398       --> TGCAGCAGCGGCTAGAGTATCTCAACTAGACCAGAGGATCGGTCTCACTG
EX887581       --> TGCAGCAGCGGCTAGAGTATCTCAACTAGACC..................
FY451024       --> TGCAGCAGCGGCTAG...................................
EX773045       --> TGCAGCAGCGGCTAGAGTATCTCAACTAGACCAGAGGATCGGTCTCACTG
FD562933       --> .................ggTCTCAACTAGACCAGAGGATCGGTCTCACTG

               751    -    801
UN26187        --> ACAAAATATTTGCCGGAGTTGAAGCTGTCAGACTGACCGACCAGAAGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891699       <-- ACAAAATCTTCGCCGGAGTTGAAGCTGTCAGACTGACCGACCAGAAGTAC
EX899422       <-- ACAAAATATTTGCCGGAGTTGGAGCTGTCAGACTGACCGACCAGAAGTAC
EX901727       <-- ACAAAATATTTGCCGGAGTTGAAGCTGTCAGACTGACCGACCAGAAGTAC
EX776891       <-- ACAAAATATTTGCCGGAGTTGAAGCTGTCAGACTGACCGACCAGAAGTAC
FD975921       <-- ACAAAATATTTGCCGGAGTTGAAGCTGTCAGACTGACCGACCAGAAGTAC
FD935069       <-- ACAAAATCTTCGCCGGAGTTGAAGCTGTCAGACTGACCGACCAGAAGTAC
EV546162       <-- ..................................................
FD982545       <-- ..................................................
EV550975       --> ACAAAATATTTGCCGGAGTTGAAGCTGTCA....................
EX895255       --> ACAAA-TATTTGCCGGAGTTGGAGCTGTCAGACTGACCGACa........
EX898099       --> ..................................................
FD979953       --> ..................................................
FD986267       --> ..................................................
FD938786       --> ..................................................
FY449398       --> ACAAAATATTTGCCGGAGTTGAAGCTGTCAGACTGACCGACCAGAAGTAC
EX887581       --> ..................................................
FY451024       --> ..................................................
EX773045       --> ACAAAATATTTGCCGGAGTTGAAGCTGTCAGACTGACCGACCAGAAGTAC
FD562933       --> ACAAAATCTTCGCCGGAGTTGAAGCTGTCAGACTGACCGACCAGAAGTAC

               801    -    851
UN26187        --> CAGGTTTCAGACAAAGCAAAATCAGCCGTCTCTGCTACAGGAAGAACCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891699       <-- CAGGTTTCAGACAAAGCAAAATCAGCCGTTTCTGCTACAGGAAGAACCGC
EX899422       <-- CAGGTTTCAGACAAAGCAAAATCAGCCGTTTCTGCTACAGGAAGAACCGC
EX901727       <-- CAGGTTTCAGACAAAGCAAAATCAGCCGTCTCTGCTACAGGAAGAACCGC
EX776891       <-- CAGGTTTCAGACAAAGCAAAATCAGCCGTTTCTGCTACAGGAAGAACCAC
FD975921       <-- CAGGTTTCAGACAAAGTAAAATCAGCCGCCTCTGCTACAGGAAGAACCGC
FD935069       <-- CAGGTTTCAGACAAAGCAAAATCAGCCGTTTCTGCTACAGGGAGAACCGC
EV546162       <-- ..................................................
FD982545       <-- ..................................................
EV550975       --> ..................................................
EX895255       --> ..................................................
EX898099       --> ..................................................
FD979953       --> ..................................................
FD986267       --> ..................................................
FD938786       --> ..................................................
FY449398       --> CAGGTTTCAGACAAAGCAAAATCAGCCGTCTCTGCTACAGGAAGAACCGC
EX887581       --> ..................................................
FY451024       --> ..................................................
EX773045       --> CAGGTTTCAGACAAAGCAAAATCAGCCGTCTCTGCTACAGGAAGAACCAC
FD562933       --> CAGGTTTCAGACAAAGCAAAATCAGCCGTCTCTGCTACAGGAAGAACCGC

               851    -    901
UN26187        --> GGCAGCAGCTGCAACTAGTGTTGTCAATAGCAGTTACTTCTCCAGCGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891699       <-- GGCAGCAGCTGCAACTAGTGTTGTCAATAGCAGTTACTTCTCCAGCGGAG
EX899422       <-- GGCAGCAGCTGCAACTAGTGTTGTCAATAGCAGTTACTCCTCCAGCGGAG
EX901727       <-- GGCAGCAGCTGCAACTAGTGTTGTCAATAGCAGTTACTTCTCCAGCGGAG
EX776891       <-- GGCAGCAGCTGCAACTATTGTTGTCAATAGCAGTTACTTCTCCAGCGGAG
FD975921       <-- GGCAGCAGCTGCAACTAGTGTTGTCAATAGCAGTTACTTCTCCAGCGGAG
FD935069       <-- GGCAGCAGCTGCAACTAGTGTTGTCAATAGCAGTTACTTCTCCAGCGGAG
EV546162       <-- ..................................................
FD982545       <-- ..................................................
EV550975       --> ..................................................
EX895255       --> ..................................................
EX898099       --> ..................................................
FD979953       --> ..................................................
FD986267       --> ..................................................
FD938786       --> ..................................................
FY449398       --> GGCAGCAGCTGCAACTAGTGTTGTCAATAGCAGTTACT............
EX887581       --> ..................................................
FY451024       --> ..................................................
EX773045       --> GGCAGCAGCTGCAACTATTGTTGTCAATAGCAGTTACTTCTCCAGCGGAG
FD562933       --> GGCAGCAGCTGCAACTAGTGTTGTCAATAGCAGTTACTTCTCCAGCGGAG

               901    -    951
UN26187        --> CTCTCTGGCTATCGGGTGCGTTAGAGCGTGCGGCTAAGGCTGCATCTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891699       <-- CTCTCTGGCTATCGGGTGCGTTAGAGCGTGCGGCTAAGGCTGCATCTGAT
EX899422       <-- CTCTCTGGCTATCGGGTGCGTTAGAGCGTGCGGCTAAGGCTGCATCTGAT
EX901727       <-- CTCTCTGGCTATCGGGTGCGTTAGAGCGTGCGGCTAAGGCTGCATCTGAT
EX776891       <-- CTCTCTGGCTATCGGGTGCGTTAGAGCGTGCGGCTAAGGCTGCATCTGAT
FD975921       <-- CTCTCTGGCTATCGGGTGCGTTAGAGCGTGCGGCTAAGGCTGCATCTGAT
FD935069       <-- CTCTCTGGCTATCGGGTGCGTTAGAGCGTGCGGCTAAGGCTGCATCTGAT
EV546162       <-- ..................................................
FD982545       <-- ..................................................
EV550975       --> ..................................................
EX895255       --> ..................................................
EX898099       --> ..................................................
FD979953       --> ..................................................
FD986267       --> ..................................................
FD938786       --> ..................................................
FY449398       --> ..................................................
EX887581       --> ..................................................
FY451024       --> ..................................................
EX773045       --> CTCTCTGGCTATCGGGTGCGTTAGAGCGTGCGGCTAAGGCTGCATCTGAT
FD562933       --> CTCTCTGGCTATCGGGTGCGTTAGAGCGTGCGGCTAAGGCTGCATCTGAT

               951    -   1001
UN26187        --> CTTGGTAGCCGTGGC-TCAAGGCAGTGATGTGAATAG-ATACGAACTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891699       <-- CTTGGTAGCCGTGGC-TCAAGGCAGTGATGTGAATAG-ATACGAACTGAT
EX899422       <-- CTTGGTAGCCGTGGC-TCAAGGCAGTGATGTGAATAG-ATACGAACTGAT
EX901727       <-- CTTGGTAGCCGTGGC-TCAAGGCAGTGATGTGAATAG-ATACGAACTGAT
EX776891       <-- CTTGGTAGCCGTGGC-TCAAGGCAGTGATGTGAATAG-ATACGAACTGAT
FD975921       <-- CTTGGTAGCCGTGGC-TCAAGGCAGTGATGTGAATAG-ATACGAACTGAT
FD935069       <-- CTTGGTAGCCGTGGC-TCAAGGCAGTGATGTGAATAG-ATACGAACTGAT
EV546162       <-- ..TGGTAGCCGTGGC-TCAAGGCAGTGATGTGAATAG-ATACGAACTGAT
FD982545       <-- ........CCGTGGCCTCAAGGCAGTGATGTGAATAGGATACGAACTGAT
EV550975       --> ..................................................
EX895255       --> ..................................................
EX898099       --> ..................................................
FD979953       --> ..................................................
FD986267       --> ..................................................
FD938786       --> ..................................................
FY449398       --> ..................................................
EX887581       --> ..................................................
FY451024       --> ..................................................
EX773045       --> CTTGGTAGCCGTGGC-TCAAGGCAGTGATGTGAATAG-ATACGAACTGAT
FD562933       --> CTTGGTAGCCGTGGC-TCAAGGCAGTGATGTGAATAG-ATACGAACTGAT

               1001   -   1051
UN26187        --> CAGAATCATATACATGCATTTATAAAAAAAACTCCCGACTTCGTACTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891699       <-- CAGAATCATATACATGCATTTATAAAAAAAACTCCCGACTTCGTACTTGT  Raphanus sativus var. oleiformis
EX899422       <-- CAGAATCATATACATGCATTTATAAAAAAA-CTCCCGACTTCGTACTTGT  Raphanus sativus cv Early Scarlet Globe
EX901727       <-- CAGAATCATATACATGCATTTATAAAAAAAACTCCCGACTTCGTACTTGT  Raphanus sativus cv Early Scarlet Globe
EX776891       <-- CAGAATCATATACATGCATTTATAAAAAAAACTCCCGGCTTCGTACTTGT  Raphanus raphanistrum subsp. landra
FD975921       <-- CAGAATCATATACATGCATTTATAAAAAAAACTCCCGGCTTCGTACTTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD935069       <-- CAGAATCATATACATGCATTTATAAAAA--ACTCCCGACTTCGTACTTGT  Raphanus sativus var. oleiformis
EV546162       <-- CAGAATCATATACATGCATTTATAAAAAAAACTCCCGGCTTCGTACTTGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD982545       <-- CAGAATCATATACATGCATTTATAAAAAAAACTCCCGGCTTCGTACTTGT  Raphanus raphanistrum subsp. landra
EV550975       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EX895255       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EX898099       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD979953       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD986267       --> ..................................................  Raphanus raphanistrum subsp. landra
FD938786       --> ..................................................  Raphanus sativus var. oleiformis
FY449398       --> ..................................................  Raphanus sativus cv GSK3-1
EX887581       --> ..................................................  Raphanus sativus var. oleiformis
FY451024       --> ..................................................  Raphanus sativus cv GSK3-1
EX773045       --> CAGAATCA..........................................  Raphanus raphanistrum subsp. landra
FD562933       --> CAGAATCATATACATGCATTTATAAAAAAAACTCCCGACTTCGTACTTGT  Raphanus sativus var. oleiformis

               1051   -   1101
UN26187        --> GTGCACCACCATCCAATAATTAGTTTACCCAATGACCCCTGATTTGATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891699       <-- GTGCACCCCCATCCAATAATTAGTTTACCC....................
EX899422       <-- GTGCACCACCATCCAATAATTAGTTTACCCAATGGCCCCTGATTTGATTT
EX901727       <-- GTGCACCCCCATCCAATAATTAGTTTACCCAATGACCCCTGATTTGATTT
EX776891       <-- GTGCACCACCATCCAATAATTAGTTTACCCAATGACCCCTGATTTGATTT
FD975921       <-- GTGCACCACCATCCAATAATTAGTTTACCCAATGACCCCTGATTTGATTT
FD935069       <-- GTGCACCACCATCCAATAATTAGTTTACCCAATGACCCCTGATTTGATTT
EV546162       <-- GTGCCCCCCCATCCAATAATTAGTTTACCCAATGACCCCTGATTTGATTT
FD982545       <-- GTGCACCACCATCCAATAATTAGTTTACCCAATGACCCCTGATTTGATTT
EV550975       --> ..................................................
EX895255       --> ..................................................
EX898099       --> ..................................................
FD979953       --> ..................................................
FD986267       --> ..................................................
FD938786       --> ..................................................
FY449398       --> ..................................................
EX887581       --> ..................................................
FY451024       --> ..................................................
EX773045       --> ..................................................
FD562933       --> GTGCACCACCATCCAATAATTAGTTTACCCAATGACCCCTGATTTGATTT

               1101   -   1151
UN26187        --> GTATGCAAAAATGTTATAAGAAGGGTGAATCTCCTGACTTCAGAAGCGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891699       <-- ..................................................
EX899422       <-- GTATGCAAAAATGTTATAAGAAGGGTGAATCTCCTGACTTC.........
EX901727       <-- GTATGCAAAAATGTTATAAGAAGGGTGAATCTCCTGACTTCAG.......
EX776891       <-- GTATGCAAAAATGTTATAAGAAGGGTGAATCTCCTGAC............
FD975921       <-- GTATGCAAAAATGTTATAAGAAGGGTGAATCTCCTGACTacaa.......
FD935069       <-- GTATGCAAAAATGTTATAAGAAGGGTGAATCTCCTGACTTC.........
EV546162       <-- GTATGCAAAAATGTTATAAGAAGGGTGAATCTCCTGACTTCAGAAGCGAT
FD982545       <-- GTATac............................................
EV550975       --> ..................................................
EX895255       --> ..................................................
EX898099       --> ..................................................
FD979953       --> ..................................................
FD986267       --> ..................................................
FD938786       --> ..................................................
FY449398       --> ..................................................
EX887581       --> ..................................................
FY451024       --> ..................................................
EX773045       --> ..................................................
FD562933       --> GTATGCAAAAATGTTATAAGAAGGGTGAATCTCCTGACTTC.........

               1151   -   1201
UN26187        --> TTACCTCAGAAGCATATAATTGATTTACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX891699       <-- .............................
EX899422       <-- .............................
EX901727       <-- .............................
EX776891       <-- .............................
FD975921       <-- .............................
FD935069       <-- .............................
EV546162       <-- TTACCTCAGAAGCATATAATTGATTTACC
FD982545       <-- .............................
EV550975       --> .............................
EX895255       --> .............................
EX898099       --> .............................
FD979953       --> .............................
FD986267       --> .............................
FD938786       --> .............................
FY449398       --> .............................
EX887581       --> .............................
FY451024       --> .............................
EX773045       --> .............................
FD562933       --> .............................