Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN26230

               1      -     51
UN26230        --> AGAAACGATAAATCTTAAGTCTTATTCGAAAATTATTTTTATACATTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532465       <-- .GAAACGATAAATCTTAAGTCTTATTCGAAAATTATTTTTATACATTTGA
EV524888       <-- ..................................taTTTTATACATT-GA
EX746785       <-- ..................................................
FY429651       <-- ..................................................
FY428146       <-- ..................................................
FY436414       <-- ..................................................
FY433065       <-- ..................................................
FY441455       <-- ..................................................
FY428289       <-- ..................................................
FY442489       <-- ..................................................
FY452136       <-- ..................................................
FY437511       <-- ..................................................
FY453831       <-- ..................................................
EV550109       <-- ..................................................
EW717559       <-- ..................................................
EW716948       <-- ..................................................
EW715610       <-- ..................................................
EW717205       <-- ..................................................
FY450577       <-- ..................................................
EY901317       <-- ..................................................
FD535432       <-- ..................................................
EW724033       <-- ..................................................
FD938664       <-- ..................................................
FD962706       <-- ..................................................
EY915202       <-- ..................................................
EV550185       <-- ..................................................
EY896657       --> AGAAACGATAAATCTTAAGTCTTATTCGAAAATTATTTTTATACATTTGA
FD528930       --> .GAAACGATAAATCTTAAGTCTTATTCGAAAATTATTTTTATACATTTGA
FD934981       --> .GAAACGATAAATCTTAAGTCTTATTCGAAAATTATTTTTATACATTTGA
EW728512       --> ...AACGATAAATCTTAAGTCTTATTCGAAAATTATTTTTATACATTTGA
EW720829       --> .......................ATTCGAAAATTATTTTTATACATTTGA
FY429375       --> ......................aaaTCGAAAATTATTTTTATACCTTTGA
EV541646       --> ........................................ATACATTTGA
EW721461       --> ........................................ATACATTTGA
EX751110       --> ........................................ATACATTTGA
EX892349       --> ........................................ATACATTTGA
FD531093       --> ........................................ATACATTTGA
FY443870       --> ............................................ATTTGA
EV545518       --> ..................................................
FY443751       --> ..................................................
EW721386       --> ..................................................
FY430361       --> ..................................................
FY432607       --> ..................................................
FD959195       --> ..................................................

               51     -    101
UN26230        --> TTAAAAGAAACGAAATGTACACATCGTCACTGTCATCATACATTAACATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532465       <-- TTAAAAGAAACGAAATGTACACATCGTCACTGTCATCATACATTAACATC  Raphanus raphanistrum subsp. maritimus
EV524888       <-- --TAAAGAAACGAAATGTACACATCGTCATTGTCATCATACATTAACATC  Raphanus raphanistrum subsp. maritimus
EX746785       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FY429651       <-- ..................................................  Raphanus sativus cv GSK3-1
FY428146       <-- ..................................................  Raphanus sativus cv GSK3-1
FY436414       <-- ..................................................  Raphanus sativus cv GSK3-1
FY433065       <-- ..................................................  Raphanus sativus cv GSK3-1
FY441455       <-- ..................................................  Raphanus sativus cv GSK3-1
FY428289       <-- ..................................................  Raphanus sativus cv GSK3-1
FY442489       <-- ..................................................  Raphanus sativus cv GSK3-1
FY452136       <-- ..................................................  Raphanus sativus cv GSK3-1
FY437511       <-- ..................................................  Raphanus sativus cv GSK3-1
FY453831       <-- ..................................................  Raphanus sativus cv GSK3-1
EV550109       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717559       <-- ..................................................  Raphanus sativus var. oleiformis
EW716948       <-- ..................................................  Raphanus sativus var. oleiformis
EW715610       <-- ..................................................  Raphanus sativus var. oleiformis
EW717205       <-- ..................................................  Raphanus sativus var. oleiformis
FY450577       <-- ..................................................  Raphanus sativus cv GSK3-1
EY901317       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD535432       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW724033       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD938664       <-- ..................................................  Raphanus sativus var. oleiformis
FD962706       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY915202       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550185       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896657       --> TTAAAAGAAACGAAATGTACACATCGTCACTGTCATCATACATTAACATC  Raphanus raphanistrum subsp. maritimus
FD528930       --> TTAAAAGAAACGAAATGTACACATCGTCACTGTCATCATACATTAACATC  Raphanus raphanistrum subsp. maritimus
FD934981       --> TTAAAAGAAACGAAATGTACACATCGTCACTGTCATCATACATTAACATC  Raphanus sativus var. oleiformis
EW728512       --> TTAAAAGAAACGAAATGTACACATCGTCACTGTCATCATACATTAACATC  Raphanus sativus cv Early Scarlet Globe
EW720829       --> TTAAAAGAAACGAAATGTAAACATCGTCACTGTCATCATACATTAACATC  Raphanus sativus var. oleiformis
FY429375       --> TTAAAAGAAACGAAATGTAAACATCGTCACTGTCATCATACATTAACATC  Raphanus sativus cv GSK3-1
EV541646       --> TTAAAAGAAACGAAATGTACACATCGTCACTGTCATCACACATTAACATC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW721461       --> TTAAAAGAAACGAAATGTAAACATCGTCACTGTCATCATACATTAACATC  Raphanus sativus var. oleiformis
EX751110       --> TTAAAAGAAACGAAATGTACACATCGTCACTGTCATCATACATTAACATC  Raphanus raphanistrum subsp. maritimus
EX892349       --> TTAAAAGAAACGAAATGTAAACATCGTCACTGTCATCATACATTAACATC  Raphanus sativus var. oleiformis
FD531093       --> TTAAAAGAAACGAAATGTACACATCGTCACTGTCATCATACATTAACATC  Raphanus raphanistrum subsp. maritimus
FY443870       --> TTAAA-G-AACGAAATGTAAACATCGTCACTGTCATCATACATTAACATC  Raphanus sativus cv GSK3-1
EV545518       --> TTAAAAGAAACGAAATGTACACATCGTCATTGTCATCATACATTAACATC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY443751       --> ...........GAAATGTAAACATCGTCACTGTCATCATACATTAACATC  Raphanus sativus cv GSK3-1
EW721386       --> ................GTAAACATCGTCACTGTCATCATACATTAACATC  Raphanus sativus var. oleiformis
FY430361       --> .................gtaACATCGTCACTGTCATCATACATTAACATC  Raphanus sativus cv GSK3-1
FY432607       --> ..................gaaaATCGTCACTGTCATCATACATTAACATC  Raphanus sativus cv GSK3-1
FD959195       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               101    -    151
UN26230        --> GTCATTGCGTATTCACATTTGGTGTCCAGATGGGATGAATATTAATATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532465       <-- GTCGTTGCGTATTCACATTTGGTGTCCAGATGGGATGAATATTAATATCC
EV524888       <-- GTCATTGCGTATTCACATTTGGTGTCCAGATGGGATGAACATTAATATCC
EX746785       <-- ..................................................
FY429651       <-- ..................................................
FY428146       <-- ..................................................
FY436414       <-- ..................................................
FY433065       <-- ..................................................
FY441455       <-- ..................................................
FY428289       <-- ..................................................
FY442489       <-- ..................................................
FY452136       <-- ..................................................
FY437511       <-- ..................................................
FY453831       <-- ..................................................
EV550109       <-- ..................................................
EW717559       <-- ..................................................
EW716948       <-- ..................................................
EW715610       <-- ..................................................
EW717205       <-- ..................................................
FY450577       <-- ..................................................
EY901317       <-- ..................................................
FD535432       <-- ..................................................
EW724033       <-- ..................................................
FD938664       <-- ..................................................
FD962706       <-- ..................................................
EY915202       <-- ..................................................
EV550185       <-- ..................................................
EY896657       --> GTCGTTGCGTATTCACATTTGGTGTCCAGATGGGATGAATATTAATATCC
FD528930       --> GTCGTTGCGTATTCACATTTGGTGTCCAGATGGGATGAATATTAATATCC
FD934981       --> GTAGTTGCGTATTCACATTTGGTGTCCAGATGGGATGAATATTAATATCC
EW728512       --> GTCGTTGCGTATTCACATTTGGTGTCCAGATGGGATGAATATTAATATCC
EW720829       --> GTCATTGCGTATTCACATTTGGTGTCCAGATGGGATGAATATTAATATCC
FY429375       --> GTCATTGCGTATTCACATTTGGTGTCCAGATGGGATGAATATTAATATCC
EV541646       --> GTCGTTGCGTATTCACATTTGGTGTCCAGATGGGATGAATATTAATATCC
EW721461       --> GTCATTGCGTATTCACATTTGGTGTCCAGATGGGATGAATATTAATATCC
EX751110       --> GTCGTTGCGTATTCACATTTGGTGTCCAGATGGGATGAATATTAATATCC
EX892349       --> GTCATTGCGTATTCACATTTGGTGTCCAGATGGGATGAATATTAATATCC
FD531093       --> GTCGTTGCGTATTCACATTTGGTGTCCAGATGGGATGAATATTAATATCC
FY443870       --> GTCATTGCGTATTCACATTTGGTGTCCAGATGGGATGAATATTAATATCC
EV545518       --> GTCATTGCGTATTCACATTTGGTGTCCAGATGGGATGAACATTAATATCC
FY443751       --> GTCATTGCGTATTCACATTTGGTGTCCAGATGGGATGAATATTAATATCC
EW721386       --> GTCATTGCGTATTCACATTTGGTGTCCAGATGGGATGAATATTAATATCC
FY430361       --> GTCATTGCGTATTCACATTTGGTGTCCAGATGGGATGAATATTAATATCC
FY432607       --> GTCATTGCGTATTCACATTTGGTGTCCAGATGGGATGAATATTAATATCC
FD959195       --> ..................................................

               151    -    201
UN26230        --> TCCACCACCTCTATTATTTTATTCACATGCATTTTAGACATTTAACGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532465       <-- TCCACCACCTCTATTATTTTATTCACATGCATTTTAGACATTTAACGCCA
EV524888       <-- CTCACCACCTCTATTATTTTATTCACATGCATTTTAGACATTTAACGCCA
EX746785       <-- ........................ACATGCATTTTAGACATTTAACGCCA
FY429651       <-- ........................ACATGCATTTTAGACATTTAACGCCA
FY428146       <-- ..................................TAGACATTTAACGCCA
FY436414       <-- ...................................AGACATTTAACGCCA
FY433065       <-- ..................................................
FY441455       <-- ..................................................
FY428289       <-- ..................................................
FY442489       <-- ..................................................
FY452136       <-- ..................................................
FY437511       <-- ..................................................
FY453831       <-- ..................................................
EV550109       <-- ..................................................
EW717559       <-- ..................................................
EW716948       <-- ..................................................
EW715610       <-- ..................................................
EW717205       <-- ..................................................
FY450577       <-- ..................................................
EY901317       <-- ..................................................
FD535432       <-- ..................................................
EW724033       <-- ..................................................
FD938664       <-- ..................................................
FD962706       <-- ..................................................
EY915202       <-- ..................................................
EV550185       <-- ..................................................
EY896657       --> TCCACCACCTCTATTATTTTATTCACATGCATTTTAAACATTTAACGCCA
FD528930       --> TCCACCACCTCTATTATTTTATTCACATGCATTTTAGACATTTAACGCCA
FD934981       --> TCCACCACCTCTATTATTTTATTCACATGCATTTTAGACATTTAACGCCA
EW728512       --> TCCACCACCTCTATTATTTTATTCACATACATTTTAGACATTTAACGCCA
EW720829       --> TCCACCACCTCTATTATTTTATTCACATGCATTTTAGACATTTAACGCCA
FY429375       --> TCCACCACCTCTATTATTTTATTCACATGCATTTTAAACATTTAACGCCA
EV541646       --> TCCACCACCTCTATTATTTTATTCACATGCATTTTAGACATTTAACGCCA
EW721461       --> TCCACCACCTCTATTATTTTATTCACATGCATTTTAGACATTTAACGCCA
EX751110       --> TCCACCACCTCTATTATTTTATTCACATGCATTTTAGACATTTAACGCCA
EX892349       --> TCCACCACCTCTATTATTTTATTCACATGCATTTTAGACATTTAACGCCA
FD531093       --> TCCACCACCTCTATTATTTTATTCACACGCATTTTAGACATTTAACGCCA
FY443870       --> TCCACCACCTCTATTATTTTATTCACATGCATTTTAGACATTTAACGCCA
EV545518       --> CTCACCACCTCTATTATTTTATTCACATGCATTTTAGACATTTAACGCCA
FY443751       --> TCCACCACCTCTATTATTTTATTCACATGCATTTTAGACATTTAACGCCA
EW721386       --> TCCACCACCTCTATTATTTTATTCACATGCATTTTAGACATTTAACGCCA
FY430361       --> TCCACCACCTCTATTATTTTATTCACATGCATTTTAGACATTTAACGCCA
FY432607       --> TCCACCACCTCTATTATTTTATTCACATGCATTTTAGACATTTAACGCCA
FD959195       --> .........................caccCATTTTAAACATTTAACCCCA

               201    -    251
UN26230        --> TCTGTGCAATCCCAACC-ACTAAACGTTAAAATATCCAACGGCCACGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532465       <-- TCTGTGCAATCCCAACC-ACTAAACGTTAAAATATCCAACGGCCACGATT
EV524888       <-- TCTGTGCAATCCCAACC-ACTAAACGTTAAAATATCCAACGGCCACGATT
EX746785       <-- TCTGTGCAATCCCAACCCACTAAACGTTAAA-TATCCAACGGCCACGATT
FY429651       <-- TCTGTGCATTCCCAACC-ACTAAACGTTAAAATATCCAACGGCCACGATT
FY428146       <-- TCTGTGCAATCCCAACC-ACTAAACGTTAAAATATCCAACGGCCACGATT
FY436414       <-- TCTGTGCAATCCCAACC-ACTAAACGTTAAAATATCCAACGGCCACGATT
FY433065       <-- ......CAATCCCAACC-ACTAAACGTTAAAATATCCAACGGCCACGATT
FY441455       <-- ............CAACC-ACTAAACGTTAAAATATCCAACGGCCACGATT
FY428289       <-- .....................AAACGTTAAAATATCCAACGGCCACGATT
FY442489       <-- .....................AAACGTTAAAATATCCAACGGCCACGATT
FY452136       <-- ......................AACGTTAAAATATCCAACGGCCACGATT
FY437511       <-- ......................................ACGGCCACGATT
FY453831       <-- .............................................CGATT
EV550109       <-- ..................................................
EW717559       <-- ..................................................
EW716948       <-- ..................................................
EW715610       <-- ..................................................
EW717205       <-- ..................................................
FY450577       <-- ..................................................
EY901317       <-- ..................................................
FD535432       <-- ..................................................
EW724033       <-- ..................................................
FD938664       <-- ..................................................
FD962706       <-- ..................................................
EY915202       <-- ..................................................
EV550185       <-- ..................................................
EY896657       --> TCTGTGCAATCCCAACC-ACTAAACGTTAAAATATCCAACGGCCACGATT
FD528930       --> TCTGTGCAATCCCAACC-ACTAAACGTTAAAATATCCAACGGCCACGATT
FD934981       --> TCTGTGCAATCCCAACC-ACTAAACGTTAAAATATCCAACGGCCACGATT
EW728512       --> TCTGTGCAATCCCAACC-ACTAAACGTTAAAATATCCAACGGCCACGATT
EW720829       --> TCTGTGCAATCCCAACC-ACTAAACGTTAAAGTATCCAACGGCCACGATT
FY429375       --> TCTGTGCAATCCCAACC-ACTAAACGTTAAAATATCCAACGGCCACGATT
EV541646       --> TCTGTGCAATCCCAACC-ACTAAACGTTAAAATATCCAACGGCCACGATT
EW721461       --> TCTGTGCAATCCCAACC-ACTAAACGTTAAAATATCCAACGGCCACGATT
EX751110       --> TCTGTGCAATCCCAACC-ACTAAACGTTAAAATATCCAACGGCCACGATT
EX892349       --> TCTGTGCAATCCCAACC-ACTAAACGTTAAAATATCCAACGGCCACGATT
FD531093       --> TCTGTGCAATCCCAACC-ACTAAACGTTAAAATATCCAACGGCCACGATT
FY443870       --> TCTGTGCAATCCCAACC-ACTAAACGTTAAAATATCCAACGGCCACGATT
EV545518       --> TCTGTGCAATCCC--CC-ACTAAACGTTAAAATATCCAACGGCCACGATT
FY443751       --> TCTGTGCAATCCCAACC-ACTAAACGTTAAAATATCCAACGGCCACGATT
EW721386       --> TCTGTGCAGTCCCAACC-ACTAAACGTTAAAATATCCAACGGCCACGATT
FY430361       --> TCTGTGCAATCCCAACC-ACTAAACGTTAAAATATCCAACGGCCACGATT
FY432607       --> TCTGTGCAATCCCAACC-ACTAAACGTTAAAATATCCAACGGCCACGATT
FD959195       --> TCTGTGCAATCCCAACC-ACTAAACGTTAAAATATCCAACGGCCACGATT

               251    -    301
UN26230        --> CGCACGTCACGCACCGACGGCTGTGATTGAAGCC-ATACCTTCAAGCTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532465       <-- CGCACGTCACGCACCGACGGCTGTGATTGAAGCC-ATACCTTCAAGCTCA
EV524888       <-- GGCACGTCACGCACCGACGGCTGTGATTGAAGCC-ATACCTTCAAGCTCA
EX746785       <-- CGCACGTCACGCAC-GACGGCTGTGATTGAAGCC-ATACCTTCAAGCTCA
FY429651       <-- CGCACGTCACGCACCGACGGCTGTGATTGAAGCC-ATACCTTCAAGCTCA
FY428146       <-- CGCACGTCACGCACCGACGGCTGTGATTGAAGCC-ATACCTTCAAGCTCA
FY436414       <-- CGCACGTCACGCACCGACGGCTGTGATTGAAGCC-ATACCTTCAAGCTCA
FY433065       <-- CGCACGTCACGCACCGACGGCTGTGATTGAAGCC-ATACCTTCAAGCTCA
FY441455       <-- CGCACGTCACGCACCGACGGCTGTGAT-GAAGCCCATACCTTCAAGCTCA
FY428289       <-- CGCACGTCACGCACCGACGGCTGTGATTGAAGCC-ATACCTTCAAGCTCA
FY442489       <-- CGCACGTCACGCACCGACGGCTGTGATTGAAGCC-ATACCTTCAAGCTCA
FY452136       <-- CGCACGTCACGCACCGACGGCTGTGATTGAAGCC-ATACCTTCAAGCTCA
FY437511       <-- CGCACGTCACGCACCGACGGCTGTGATTGAAGCC-ATACCTTCAAGCTCA
FY453831       <-- CGCACGTCACGCACCGACGGCTGTGATTGAAGCC-ATACCTTCAAGCTCA
EV550109       <-- ..................................................
EW717559       <-- ..................................................
EW716948       <-- ..................................................
EW715610       <-- ..................................................
EW717205       <-- ..................................................
FY450577       <-- ..................................................
EY901317       <-- ..................................................
FD535432       <-- ..................................................
EW724033       <-- ..................................................
FD938664       <-- ..................................................
FD962706       <-- ..................................................
EY915202       <-- ..................................................
EV550185       <-- ..................................................
EY896657       --> CGCACGTCACGCACCGACGGCTGTGATTGAAGCC-ATACCTTCAAGCTCA
FD528930       --> CGCACGTCACGCACCGACGGCTGTGATTGAAGCC-ATACCTTCAAGCTCA
FD934981       --> CGCACGTCACGCACCGACGGCTGTGATTGAAGCC-ATACCTTCAAGCTCA
EW728512       --> CGCACGTCACGCACCGACGGCTGTGATTGAAGCC-ATACCTTCAAGCTCA
EW720829       --> CGCACGTCACGCACCGACGGCTGTGATTGAAGCC-ATACCTTCAAGCTCA
FY429375       --> CGCACGTCACGCACCGACGGCTGTGATTGAAGCC-ATACCTTCAAGCTCA
EV541646       --> CGCACGTCAGGCGCCGACGGCTGTGATTGAAGCC-ATACCTTCAAGCTCA
EW721461       --> CGCACGTCACGCACCGACGGCTGTGATTGAAGCC-ATACCTTCAAGCTCA
EX751110       --> CGCACGTCACGCACCGACGGCTGTGATTGAAGCC-ATACCTTCAAGCTCA
EX892349       --> CGCACGTCACGCACCGACGGCTGTGATTGAAGCC-ATACCTTCAAGCTCA
FD531093       --> CGCACGTCACGCACCGACGGCTGTGATTGAAGCC-GTACCTTCAAGCTCA
FY443870       --> TGCACGTCACGCACCGACGGCTGTGATTGAAGCC-ATACCTTCAAGCTCA
EV545518       --> GGCACGTCACGCACCGACGGCTGTGATTGAAGCC-ATACCTTCAAGCTCA
FY443751       --> TGCACGTCACGCACCGACGGCTGTGATTGAAGCC-ATACCTTCAAGCTCA
EW721386       --> CGCACGTCACGCACCGACGGCTGTGATTGAAGCC-ATACCTTCAAGCTCA
FY430361       --> CGCACGTCACGCACCGACGGCTGTGATTGAAGCC-ATACCTTCAAGCTCA
FY432607       --> CGCACGTCACGCACCGACGGCTGTGATTGAAGCC-ATACCTTCAAGCTCA
FD959195       --> CCCACGTCACGCACCGACGGCTGTGATTGAAGCC-ATACCTTCAAGCTCA

               301    -    351
UN26230        --> CTCTTGCTCC-GTCTGATCCTCTCACCGCCGTCATCGCATCCGCTCGTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532465       <-- CTCTTGCTCCc.......................................
EV524888       <-- CTCTTGCTCC-GTCTGATCCTCTCACCGCCGTCATCACATCCGCTCGTAG
EX746785       <-- CTCTTGCTCC-GTCTGATCCTCTCACCGCCGTCATCGCATCCGCTCGTAG
FY429651       <-- CTCTTGCTCC-GTCTGATCCTCTCACCGCCGTCATCGCATCCGCTCGTAG
FY428146       <-- CTCTTGCTCC-GTCTGATCCTCTCACCGCCGTCATCGCATCCGCTCGTAG
FY436414       <-- CTCTTGCTCC-GTCTGATCCTCTCACCGCCGTCATCGCATCCGCTCGTAG
FY433065       <-- CTCTTGCTCC-GTCTGATCCTCTCACCGCCGTCATCGCATCCGCTCGTAG
FY441455       <-- CTCTTGCTCC-GTCTGATCCTCTCACCGCCGTCATCGCATCCGCTCGTAG
FY428289       <-- CTCTTGCTCC-GTCTGATCCTCTCACCGCCGTCATCGCATCCGCTCGTAG
FY442489       <-- CTCTTGCTCC-GTCTGATCCTCTCACCGCCGTCATCGCATCCGCTCGTAG
FY452136       <-- CTCTTGCTCC-GTCTGATCCTCTCACCGCCGTCATCGCATCCGCTCGTAG
FY437511       <-- CTCTTGCTCC-GTCTGATCCTCTCACCGCCGTCATCGCATCCGCTCGTAG
FY453831       <-- CTCT-GCTCCCGTCTGATCCTCTCACCGCCGTCATCGCATCCGCTCGTAG
EV550109       <-- ..............TGATCCTCTCACCGC-GTCATCACATCCGCTCGTAG
EW717559       <-- .................................ATCGCATC-GCTCGTAG
EW716948       <-- ..................................................
EW715610       <-- ..................................................
EW717205       <-- ..................................................
FY450577       <-- ..................................................
EY901317       <-- ..................................................
FD535432       <-- ..................................................
EW724033       <-- ..................................................
FD938664       <-- ..................................................
FD962706       <-- ..................................................
EY915202       <-- ..................................................
EV550185       <-- ..................................................
EY896657       --> CTCTTGCTCC-GTCTGATCCTCTCACCGCCGTCATCGCATCCGCTCGTAG
FD528930       --> CTCTTGCTCCc.......................................
FD934981       --> CTCTTGCTCC-GTCTGATCCTCTCACCGCCGTCATCGCATCCGCTCGTAG
EW728512       --> CTCTTGCTCC-GTCTGATCC-CTCACCGCCGTCATCGCATCCGCTCGTAG
EW720829       --> CTCTTGCTCC-GCCTGATCCTCTCACCGCCGTCATCGCATCCGCTCGTAG
FY429375       --> CTCTTGCTCC-GTCTGATCCTCTCACCGCCGTCATCGCATCCGCTCGTAG
EV541646       --> CTCTTGCTCC-GTCTGATCCTCTCACCGCCGTCATTACATCCGCTCGTAG
EW721461       --> CTCTTGCTCC-GTCTGATCCTCTCACCGCCGTCATCGCATCCGCTCGTAG
EX751110       --> CTCTTGCTCC-GTCTGATCCTCTCACCGCCGTCATCGCATCCGCTCGTAG
EX892349       --> CTCTTGCTCC-GTCTGATCCTCTCACCGCCGTCATCGCATCCGCTCGTAG
FD531093       --> CTCTTGCTCC-GTCTGATCCTCTCACCGCCGTCATCGCATCCGCTCGTAG
FY443870       --> CTCTTGCTCC-GTCTGATCCTCTCACCGCCGTCATCGCATCCGCTCGTAG
EV545518       --> CTCTTGCTCC-GTCTGATCC-CTCACCGCCGTCATCACATCCGCTCGTAG
FY443751       --> CTCTTGCTCC-GTCTGATCCTCTCACCGCCGTCATCGCATCCGCTCGTAG
EW721386       --> CTCTTGCTCC-GTCTGATCCTCTCACCGCCGTCATCGCATCCGCTCGTAG
FY430361       --> CTCTTGCTCC-GTCTGATCCTCTCACCGCCGTCATCGCATCCGCTCGTAG
FY432607       --> CTCTTGCTCC-GTCTGATCCTCTCACCGCCGTCATCGCATCCGCTCGTAG
FD959195       --> CTCTTGCTCC-GTCTGATCCTCTCACCGCCGTCATCGCATCCGCTCGTAG

               351    -    401
UN26230        --> CCGTCGCCCAAATATCCGGCACCGCTGTAGCTATATCAGTTACACTCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532465       <-- ..................................................
EV524888       <-- CCGTCGACCAAATATCCGGCACCGCTGCAGCTATATCAGTTACACTCTCC
EX746785       <-- CCGTCGCCCAAATATCCGGTACCGCTGTAGCTATATCAGTTACACTCTCC
FY429651       <-- CCGTCGCCCAAATATCCGGCACCGCTGTAGCTATATCAGTTACACTCTCC
FY428146       <-- CCGTCGCCCAAATATCCGGCACCGCTGTAGCTATATCAGTTACACTCTCC
FY436414       <-- CCGTCGCCCAAATATCCGGCACCGCTGTAGCTATATCAGTTACACTCTCC
FY433065       <-- CCGTCGCCCAAATATCCGGCACCGCTGTAGCTATATCAGTTACACTCTCC
FY441455       <-- CCGTCGCCCAAATATCCGGCACCGCTGTAGCTATATCAGTTACACTCTCC
FY428289       <-- CCGTCGCCCAAATATCCGGCACCGCTGTAGCTATATCAGTTACACTCTCC
FY442489       <-- CCGTCGCCCAAATATCCGGCACCGCTGTAGCTATATCAGTTACACTCTCC
FY452136       <-- CCGTCGCCCAAATATCCGGCACCGCTGTAGCTATATCAGTTACACTCTCC
FY437511       <-- CCGTCGCCCAAATATCCGGCACCGCTGTAGCTATATCAGTTACACTCTCC
FY453831       <-- CCGTCGCCCAAATATCCGGCACCGCTGTAGCTATATCAGTTACACTCTCC
EV550109       <-- CCGTCGCCCAAATATCCGGCACCGATGCAGCTATATCAGTTACACTCTCC
EW717559       <-- C-GTCGCCCAAATATC-GGCACCGCTGTAGCTATATCAGT-ACACTCTCC
EW716948       <-- .....GCCCAAATATCCGGCACCGCTGTAGCTATATTAGTTACACTCTCC
EW715610       <-- ...................CACCGCTGTAGCTATATCAGTTACACTCTCC
EW717205       <-- ......................CGCTGTAGCTACATCAGTTACACTCTCC
FY450577       <-- ...........................TAGCTATATCAGTTACACTCTCC
EY901317       <-- ..................................................
FD535432       <-- ..................................................
EW724033       <-- ..................................................
FD938664       <-- ..................................................
FD962706       <-- ..................................................
EY915202       <-- ..................................................
EV550185       <-- ..................................................
EY896657       --> CCGTCGCCCAAATATCCGGTACCGCTGTAGCTATATCAGTTACACTCTCC
FD528930       --> ..................................................
FD934981       --> CCGTCGCCCAAATATCCGGTACCGCTGTAGCTATATCAGTTACACTCTCC
EW728512       --> CCGTCGCCCAAATATCCGGTACCGCTGTAGCTATATCAGTTACACTCTCC
EW720829       --> CCGTCGCCCAAATATCCGGCACCGCTGTAGCTACATCAGTTACACTCTCC
FY429375       --> CCGTCGCCCAAATATCCGGCACCGCTGTAGCTATATCAGTTACACTCTCC
EV541646       --> CCGTCGCC--AATGTCCGGCACCGCTGTAGCTATATCAGTTACACTCTCC
EW721461       --> CCGTCGCCCAAATATCCGGCACCGCTGTAGCTATATCAGTTACACTCTCC
EX751110       --> CCGTCGCCCAAATATCCGGTACCGCTGTAGCTATATCAGTTACACTCTCC
EX892349       --> CCGTCGCCCAAATATCCGGCACCGCTGTAGCTATATCAGTTACACTCTCC
FD531093       --> CCGTCGCCCAAATATCCGGTACCGCTGTAGCTATATCAGTTACACTCTCC
FY443870       --> CCGTCGCCCAAATATCCGGCACCGCTGTAGCTATATCAGTTACACTCTCC
EV545518       --> CCGTCGCCCAAATATCCGGCACCGCTGCAGCTATATCAGTTACACTCTCC
FY443751       --> CCGTCGCCCAAATATCCGGCACCGCTGTAGCTATATCAGTTACACTCTCC
EW721386       --> CCGTCGCCCAAATATCCGGCACCGCTGTAGCTATATTAGTTACACTCTCC
FY430361       --> CCGTCGCCCAAATATCCGGCACCGCTGTAGCTATATCAGTTACACTCTCC
FY432607       --> CCGTCGCCCAAATATCCGGCACCGCTGTAGCTATATCAGTTACACTCTCC
FD959195       --> CCGTCCCCCAAATATCCGGTACCGCTGTAGCTATATCAGTTACACTCTCC

               401    -    451
UN26230        --> ACTGCATAATCCGCATCTTTAGTCTTTTCTGATCTTCCCACCAGGA-TTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532465       <-- ..................................................
EV524888       <-- ACTGCATAATCCGCATCTTTAGTCTTTTCTGATCTTCCCACCAGGA-TTG
EX746785       <-- ACTGCATAATCCGCATCTTTAGTCTTTTCTGATCTTCCCACCAGGAATTG
FY429651       <-- ACTGCATAATCCGCATCTTTAGTCTTTTCTGATCTTCCCACCAGGA-TTG
FY428146       <-- ACTGCATAATCCGCATCTTTAGTCTTTTCTGATCTTCCCACCAGGA-TTG
FY436414       <-- ACTGCATAATCCGCATCTTTAGTCTTTTCTGATCTTCCCACCAGGA-TTG
FY433065       <-- ACTGCATAATCCGCATCTTTAGTCTTTTCTGATCTTCCCACCAGGA-TTG
FY441455       <-- ACTGCATAATCCGCATCTTTAGTCTTTTCTGATCTTCCCACCAGGA-TTG
FY428289       <-- ACTGCATAATCCGCATCTTTAGTCTTTTCTGATCTTCCCACCAGGA-TTG
FY442489       <-- ACTGCATAATCCGCATCTTTAGTCTTTTCTGATCTTCCCACCAGGA-TTG
FY452136       <-- ACTGCATAATCCGCATCTTTAGTCTTTTCTGATCTTCCCACCAGGA-TTG
FY437511       <-- ACTGCATAATCCGCATCTTTAGTCTTTTCTGATCTTCCCACCAGGA-TTG
FY453831       <-- ACTGCATAATCCGCATCTTTAGTCTTTTCTGATCTTCCCACCAGGA-TTG
EV550109       <-- ACTGCATAATCCGCATCTTTAGTCTTTTCTGATCTTCCCACCAGGA-TTG
EW717559       <-- ACTGCATAATCCGCATCTTTAGTCTTT-CTGATCTTCCCACCAGGA-TTG
EW716948       <-- ACTGCATA-TCCGCATCTTTAGTCTTT-CTGATCTTCCCACCAGGA-TTG
EW715610       <-- ACTGCATAATCCGCATCTTTAGTCTTT-CTGATCTTCCCACCAGGA-TTG
EW717205       <-- ACTGCATA-TCCGCATCTTTAGTCTTT-CTGATCTTCCCACCAGGA-TTG
FY450577       <-- ACTGCATAATCCGCATCTTTAGTCTTTTCTGATCTTCCCACCAGGA-TTG
EY901317       <-- ......atATCCGCATCTTTAGTCTTT-CTGATCT-CCCACCAGGA-TTG
FD535432       <-- .............................................A-TTG
EW724033       <-- ..................................................
FD938664       <-- ..................................................
FD962706       <-- ..................................................
EY915202       <-- ..................................................
EV550185       <-- ..................................................
EY896657       --> ACTGCATAATCCGCATCTTTAGTCTTTTCTGATCTTCCCACCAGGA-TTG
FD528930       --> ..................................................
FD934981       --> ACTGCATAATCCGCATCTTTAGTCTTTTCTGATCTTCCCACCAGGA-TTG
EW728512       --> ACTGCATAATCCGCATCTTTAGTCTTTTCTGATCTTCCCACCAGGA-TTG
EW720829       --> ACTGCATAATCCGCATCTTTAGTCTTTTCTGATCTTCCCACCAGGA-TTG
FY429375       --> ACTGCATAATCCGCATCTTTAGTCTTTTCTGATCTTCCCACCAGGA-TTG
EV541646       --> ACTGCATAATCCGCATCTTTAGTCTTTTCTGATCTTCCCACCAGGA-TTG
EW721461       --> ACTGCATAATCCGCATCTTTAGTCTTTTCTGATCTTCCCACCAGGA-TTG
EX751110       --> ACTGCATAATCCGCATCTTTAGTCTTTTCTGATCTTCCCACCAGGA-TTG
EX892349       --> ACTGCATAATCCGCATCTTTAGTCTTTTCTGATCTTCCCACCAGGA-TTG
FD531093       --> ACTGCATAATCCGCATCTTTAGTCTTTTCTGATCTTCCCACCAGGA-TTG
FY443870       --> ACTGCATAATCCGCATCTTTAGTCTTTTCTGATCTTCCCACCAGGA-TTG
EV545518       --> ACTGCATAATCCGCATCTTTAGTCTTTTCTGATCTTCCCACCAGGA-TTG
FY443751       --> ACTGCATAATCCGCATCTTTAGTCTTTTCTGATCTTCCCACCAGGA-TTG
EW721386       --> ACTGCATAATCCGCATCTTTAGTCTTTTCTGATCTTCCCACCAGGA-TTG
FY430361       --> ACTGCATAATCCGCATCTTTAGTCTTTTCTGATCTTCCCACCAGGA-TTG
FY432607       --> ACTGCATAATCCGCATCTTTAGTCTTTTCTGATCTTCCCACCAGGA-TTG
FD959195       --> ACTGCATAATCCGCATCTTTAGTCTTTTCTGATCTTCCCACCAGGA-TTG

               451    -    501
UN26230        --> TGTGAAGCCCCACAGATTTACCGGCGGTAATATTGTGGACATTATCATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532465       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV524888       <-- TGCGAAGCCCCACAGATTTACCCGCGGTGATATTGTGGACATTATCATCC  Raphanus raphanistrum subsp. maritimus
EX746785       <-- TGTGAAGCCCCACAGATTTACCGGCGGTAATATTGTGGACATTATCATCC  Raphanus raphanistrum subsp. maritimus
FY429651       <-- TGTGAAGCCCCACAGATTTGCCGGCGGTAATATTGTGGACATTATCATCC  Raphanus sativus cv GSK3-1
FY428146       <-- TGTGAAGCCCCACAGATTTGCCGGCGGTAATATTGTGGACATTATCATCC  Raphanus sativus cv GSK3-1
FY436414       <-- TGTGAAGCCCCACAGATTTGCCGGCGGTAATATTGTGGACATTATCATCC  Raphanus sativus cv GSK3-1
FY433065       <-- TGTGAAGCCCCACAGATTTGCCGGCGGTAATATTGTGGACATTATCATCC  Raphanus sativus cv GSK3-1
FY441455       <-- TGTGAAGCCCCACAGATTTGCCGGCGGTAATATTGTGGACATTATCATCC  Raphanus sativus cv GSK3-1
FY428289       <-- TGTGAAGCCCCACAGATTTGCCGGCGGTAATATTGTGGACATTATCATCC  Raphanus sativus cv GSK3-1
FY442489       <-- TGTGAAGCCCCACAGATTTGCCGGCGGTAATATTGTGGACATTATCATCC  Raphanus sativus cv GSK3-1
FY452136       <-- TGTGAAGCCCCACAGATTTGCCGGCGGTAATATTGTGGACATTATCATCC  Raphanus sativus cv GSK3-1
FY437511       <-- TGTGAAGCCCCACAGATTTGCCGGCGGTAATATTGTGGACATTATCATCC  Raphanus sativus cv GSK3-1
FY453831       <-- TGTGAAGCCCCACAGATTTGCCGGCGGTAATATTGTGGACATTATCATCC  Raphanus sativus cv GSK3-1
EV550109       <-- TGCGAAGCCCCACAGATTTACCCGCGGTGATATTGTGGACATTATCATCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717559       <-- TGTGAAGCCCCACAGATTTACCGGCGGTAATATTGTGGACATTATCATCC  Raphanus sativus var. oleiformis
EW716948       <-- TGTGAAGCCCCACAGATTTACCGGCGGTAATATTGTGGACATTATCATCC  Raphanus sativus var. oleiformis
EW715610       <-- TGTGAAGCCCCACAGATTTACCGGTGGTAATATTGTGGACATTATCATCC  Raphanus sativus var. oleiformis
EW717205       <-- TGTGAAGCCCCACAGATTTACCGGCGGTAATATTGTGGACATTATCATCC  Raphanus sativus var. oleiformis
FY450577       <-- TGTGAAGCCCCACAGATTTGCCGGCGGTAATATTGTGGACATTATCATCC  Raphanus sativus cv GSK3-1
EY901317       <-- TGTGAAGCCCCACAGATTTACCGGCGGTAATATTGTGGACATTATCATCC  Raphanus raphanistrum subsp. maritimus
FD535432       <-- TGTGAAGCCCCACAGATTTACCGGCGGTAATATTGTGGACATTATCATCC  Raphanus raphanistrum subsp. maritimus
EW724033       <-- ............................AATATTGTGGACATTATCATCC  Raphanus sativus cv Early Scarlet Globe
FD938664       <-- ....................................GGACATTATCATCC  Raphanus sativus var. oleiformis
FD962706       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY915202       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550185       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896657       --> TGTGAAGCCCCACAGATTTACCGGCGGTAATATTGTGGACATTATCATCC  Raphanus raphanistrum subsp. maritimus
FD528930       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD934981       --> TGTGAAGCCCCACAGATTTACCAGCGGTAATATTGTGGACATTATCATCC  Raphanus sativus var. oleiformis
EW728512       --> TGTGAAGCCCCACAGATTTACCGGCGGTAATATTGTGGACATTATCATCC  Raphanus sativus cv Early Scarlet Globe
EW720829       --> TGTGAAGCCCCACAGATTTACCGGCGGTAATATTGTGGACATTATCATCC  Raphanus sativus var. oleiformis
FY429375       --> TGTGAAGCCCCACAGATTTGCCGGCGGTAATATTGTGGACATTATCATCC  Raphanus sativus cv GSK3-1
EV541646       --> TGCGAAGCCCCACAGATTTACCCGCGGTAATATTGTGGACATTATCATCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW721461       --> TGTGAAGCCCCACAGATTTACCGGCGGTAATATTGTGGACATTATCATCC  Raphanus sativus var. oleiformis
EX751110       --> TGTGAAGCCCCACAGATTTACCGGCGGTAATATTGTGGACATTATCATCC  Raphanus raphanistrum subsp. maritimus
EX892349       --> TGTGAAGCCCCACAGATTTACCGGCGGTAATATTGTGGACATTATCATCC  Raphanus sativus var. oleiformis
FD531093       --> TGTGAAGCCCCACAGATTTACCGGCGGTAATATTGTGGACATTATCATCC  Raphanus raphanistrum subsp. maritimus
FY443870       --> TGTGAAGCCCCACAGATTTGCCGGCGGTAATATTGTGGACATTATCATCC  Raphanus sativus cv GSK3-1
EV545518       --> TGCGAAGCCCCACAGATTTACCCGCGGTGATATTGTGGACATTATCATCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY443751       --> TGTGAAGCCCCACAGATTTGCCGGCGGTAATATTGTGGACATTATCATCC  Raphanus sativus cv GSK3-1
EW721386       --> TGTGAAGCCCCACAGATTTACCGGCGGTAATATTGTGGACATTATCATCC  Raphanus sativus var. oleiformis
FY430361       --> TGTGAAGCCCCACAGATTTGCCGGCGGTAATATTGTGGACATTATCATCC  Raphanus sativus cv GSK3-1
FY432607       --> TGTGAAGCCCCACAGATTTGCCGGCGGTAATATTGTGGACATTATCATCC  Raphanus sativus cv GSK3-1
FD959195       --> TGTGAAGCCCC.......................................  Raphanus raphanistrum subsp. maritimus

               501    -    551
UN26230        --> AAAAATACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCACACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532465       <-- ..................................................
EV524888       <-- AAAAACACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCATACA
EX746785       <-- AAAAATACCGCCTCGGCGAGGGGTCAACGTTGGCGATACGAATGCACACA
FY429651       <-- AAAAATACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCACACA
FY428146       <-- AAAAATACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCACACA
FY436414       <-- AAAAATACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCACACA
FY433065       <-- AAAAATACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCACACA
FY441455       <-- AAAAATACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCACACA
FY428289       <-- AAAAATACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCACACA
FY442489       <-- AAAAATACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCACACA
FY452136       <-- AAAAATACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCACACA
FY437511       <-- AAAAATACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCACACA
FY453831       <-- AAAAATACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCACACA
EV550109       <-- AAAAACACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCATACA
EW717559       <-- AAAAATACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCACACA
EW716948       <-- AAAAATACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCACACA
EW715610       <-- AAAAATACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCACACA
EW717205       <-- AAAAATACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCACACA
FY450577       <-- AAAAATACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCACACA
EY901317       <-- AAAAATACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCACACA
FD535432       <-- AAAAATACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCACACA
EW724033       <-- AAAAATACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCACACA
FD938664       <-- AAAAATACC-CC-CGACGAGGG-TCAACGTTGGCGATACGAATGCACACA
FD962706       <-- ................CGAGGG-TCAACGTTGGCGATACGAATGCACACA
EY915202       <-- ...................GGG-TCAACGTCGGCGATACGAATGCATACA
EV550185       <-- ..................................................
EY896657       --> AAAAATACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCACACA
FD528930       --> ..................................................
FD934981       --> AAAAATACCCCC-CGACGAGGG-TCAACGTTGGCGATACGAATGCACACA
EW728512       --> AAAAATACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCACACA
EW720829       --> AAAAATACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCACACA
FY429375       --> AAAAATACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCACACA
EV541646       --> AAAAACACCGCC-CGGCGAGGG-TCAACGTTGGTGACACGAATGCACACA
EW721461       --> AAAAATACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCACACA
EX751110       --> AAAAATACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCACACA
EX892349       --> AAAAATACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCACACA
FD531093       --> AAAAATACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCACACA
FY443870       --> AAAAATACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCACACA
EV545518       --> AAAAACACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCATACA
FY443751       --> AAAAATACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCACACA
EW721386       --> AAAAATACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCACACA
FY430361       --> AAAAATACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCACACA
FY432607       --> AAAAATACCGCC-CGGCGAGGG-TCAACGTTGGCGATACGAATGCACACA
FD959195       --> ..................................................

               551    -    601
UN26230        --> TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532465       <-- ..................................................
EV524888       <-- TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
EX746785       <-- TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
FY429651       <-- TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
FY428146       <-- TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
FY436414       <-- TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
FY433065       <-- TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
FY441455       <-- TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
FY428289       <-- TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
FY442489       <-- TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
FY452136       <-- TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
FY437511       <-- TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
FY453831       <-- TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
EV550109       <-- TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
EW717559       <-- TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
EW716948       <-- TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
EW715610       <-- TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
EW717205       <-- TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
FY450577       <-- TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
EY901317       <-- TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
FD535432       <-- TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
EW724033       <-- TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
FD938664       <-- TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
FD962706       <-- TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
EY915202       <-- TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
EV550185       <-- ..................................................
EY896657       --> TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
FD528930       --> ..................................................
FD934981       --> TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
EW728512       --> TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
EW720829       --> TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
FY429375       --> TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
EV541646       --> TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
EW721461       --> TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
EX751110       --> TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
EX892349       --> TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
FD531093       --> TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
FY443870       --> TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
EV545518       --> TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
FY443751       --> TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
EW721386       --> TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
FY430361       --> TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
FY432607       --> TCCATCGCGGTCAACGAAGGCTTGAGCACGACGGGATGCTCATCGGGTCG
FD959195       --> ..................................................

               601    -    651
UN26230        --> GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532465       <-- ..................................................
EV524888       <-- GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACATATTATCT
EX746785       <-- GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
FY429651       <-- GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
FY428146       <-- GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
FY436414       <-- GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
FY433065       <-- GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
FY441455       <-- GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
FY428289       <-- GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
FY442489       <-- GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
FY452136       <-- GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
FY437511       <-- GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
FY453831       <-- GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
EV550109       <-- GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACATATTATCT
EW717559       <-- GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
EW716948       <-- GGTTGTTGGTCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
EW715610       <-- GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
EW717205       <-- GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
FY450577       <-- GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
EY901317       <-- GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
FD535432       <-- GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
EW724033       <-- GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
FD938664       <-- GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
FD962706       <-- GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
EY915202       <-- GGTTGTTGGCCCGAATAAATTTGGGTTCATTGTCTCGAAACATATTATCT
EV550185       <-- ..................................................
EY896657       --> GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
FD528930       --> ..................................................
FD934981       --> GGTTGTTGGCCCGAATAAATTCGGGTTCATTG..................
EW728512       --> GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
EW720829       --> GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
FY429375       --> GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
EV541646       --> GGTTGTTGACCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
EW721461       --> GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
EX751110       --> GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
EX892349       --> GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
FD531093       --> GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
FY443870       --> GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
EV545518       --> GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACATATTATCT
FY443751       --> GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
EW721386       --> GGTTGTTGGTCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
FY430361       --> GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
FY432607       --> GGTTGTTGGCCCGAATAAATTCGGGTTCATTGTCTCGAAACAGATTATCT
FD959195       --> ..................................................

               651    -    701
UN26230        --> CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532465       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV524888       <-- CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus raphanistrum subsp. maritimus
EX746785       <-- CTTCGAA...........................................  Raphanus raphanistrum subsp. maritimus
FY429651       <-- CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus sativus cv GSK3-1
FY428146       <-- CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus sativus cv GSK3-1
FY436414       <-- CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus sativus cv GSK3-1
FY433065       <-- CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus sativus cv GSK3-1
FY441455       <-- CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus sativus cv GSK3-1
FY428289       <-- CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus sativus cv GSK3-1
FY442489       <-- CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus sativus cv GSK3-1
FY452136       <-- CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus sativus cv GSK3-1
FY437511       <-- CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus sativus cv GSK3-1
FY453831       <-- CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus sativus cv GSK3-1
EV550109       <-- CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717559       <-- CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus sativus var. oleiformis
EW716948       <-- CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus sativus var. oleiformis
EW715610       <-- CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus sativus var. oleiformis
EW717205       <-- CTTCGAAACAATCTTCTAAACCCGATCTCTCAAGAACCTTCATCGCATGG  Raphanus sativus var. oleiformis
FY450577       <-- CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus sativus cv GSK3-1
EY901317       <-- CTTCGAAACAGTCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus raphanistrum subsp. maritimus
FD535432       <-- CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus raphanistrum subsp. maritimus
EW724033       <-- CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus sativus cv Early Scarlet Globe
FD938664       <-- CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus sativus var. oleiformis
FD962706       <-- CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus raphanistrum subsp. maritimus
EY915202       <-- CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550185       <-- .........................................attGCATGG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896657       --> C.................................................  Raphanus raphanistrum subsp. maritimus
FD528930       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD934981       --> ..................................................  Raphanus sativus var. oleiformis
EW728512       --> CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus sativus cv Early Scarlet Globe
EW720829       --> CTTCGAAACAATCTTCTAAACCCGATCTCTCAAGAACCTTCATCGCATGG  Raphanus sativus var. oleiformis
FY429375       --> CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus sativus cv GSK3-1
EV541646       --> CTTCGAAACAATCTTCTAAACCCAATATCTCAAGAACCTTCATCGCATGG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW721461       --> CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus sativus var. oleiformis
EX751110       --> CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus raphanistrum subsp. maritimus
EX892349       --> CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus sativus var. oleiformis
FD531093       --> CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus raphanistrum subsp. maritimus
FY443870       --> CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus sativus cv GSK3-1
EV545518       --> CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY443751       --> CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus sativus cv GSK3-1
EW721386       --> CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus sativus var. oleiformis
FY430361       --> CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus sativus cv GSK3-1
FY432607       --> CTTCGAAACAATCTTCTAAACCCAATCTCTCAAGAACCTTCATCGCATGG  Raphanus sativus cv GSK3-1
FD959195       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               701    -    751
UN26230        --> TTCCTGTCTGAATTCGTGAAAATGATTTTTCTCTGTTTGATTTTGTTCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532465       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV524888       <-- CTCCTGTCTGAGTTCGTGAAAATGATTTTTCTCTGTTTGATTTTGTTCAG  Raphanus raphanistrum subsp. maritimus
EX746785       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FY429651       <-- TTCCTGTCTGAATTCGTGAAAATGATTTTTCTCTGTTTGATTTTGTTCAG  Raphanus sativus cv GSK3-1
FY428146       <-- TTCCTGTCTGAATTCGTGAAAATGATTTTTCTCTGTTTGATTTTGTTCAG  Raphanus sativus cv GSK3-1
FY436414       <-- TTCCTGTCTGAATTCGTGAAAATGATTTTTCTCTGTTTGATTTTGTTCAG  Raphanus sativus cv GSK3-1
FY433065       <-- TTCCTGTCTGAATTCGTGAAAATGATTTTTCTCTGTTTGATTTTGTTCAG  Raphanus sativus cv GSK3-1
FY441455       <-- TTCCTGTCTGAATTCGTGAAAATGATTTTTCTCTGTTTGATTTTGTTCAG  Raphanus sativus cv GSK3-1
FY428289       <-- TTCCTGTCTGAATTCGTGAAAATGATTTTTCTCTGTTTGATTTTGTTCAG  Raphanus sativus cv GSK3-1
FY442489       <-- TTCCTGTCTGAATTCGTGAAAATGATTTTTCTCTGTTTGATTTTGTTCAG  Raphanus sativus cv GSK3-1
FY452136       <-- TTCCTGTCTGAATTCGTGAAAATGATTTTTCTCTGTTTGATTTTGTTCAG  Raphanus sativus cv GSK3-1
FY437511       <-- TTCCTGTCTGAATTCGTGAAAATGATTTTTCTCTGTTTGATTTTGTTCAG  Raphanus sativus cv GSK3-1
FY453831       <-- TTCCTGTCTGAATTCGTGAAAATGATTTTTCTCTGTTTGATTTTGTTCAG  Raphanus sativus cv GSK3-1
EV550109       <-- CTCCTGTCTGAGTTCGTGAAAATGATTTTTCTCTGTTTGATTTTGTTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717559       <-- TTCCTGTCTGAATTCGTGAAAATGATTTTTCTCTGTTTGATTTTGTTCAG  Raphanus sativus var. oleiformis
EW716948       <-- TTCCTGTCTGAATTCGTGAAAATGATTTTTCTCTGTTTGATTTTGTTCAG  Raphanus sativus var. oleiformis
EW715610       <-- TTCCTGTCTGAATTCGTGAAAATGATTTTTCTCTGTTTGATTTTGTTCAG  Raphanus sativus var. oleiformis
EW717205       <-- TTCCTGTCTGAATTCGTGAAAATGATTTTTCACTGTTTGATTTTGTTCAG  Raphanus sativus var. oleiformis
FY450577       <-- TTCCTGTCTGAATTCGTGAAAATGATTTTTCTCTGTTTGATTTTGTTCAG  Raphanus sativus cv GSK3-1
EY901317       <-- TTCCTGTCTGAATTCGTGAAAATGATTTTTCTCTGTTTGATTTTGTTCAG  Raphanus raphanistrum subsp. maritimus
FD535432       <-- TTCCTGTCTGAATTCGTGAAAATGATTTTTCTCTGTTTGATTTTGTTCAG  Raphanus raphanistrum subsp. maritimus
EW724033       <-- TTCCTGTCTGAATTCGTGAAAATGATTTTTCTCTGTTTGATTTTGTTCAG  Raphanus sativus cv Early Scarlet Globe
FD938664       <-- TTCCTGTCTGAATTCGTGAAAATGATTTTTCTCTGTTTGATTTTGTTCAG  Raphanus sativus var. oleiformis
FD962706       <-- TTCCTGTCTGAATTCGTGAAAATGATTTTTCTCTGTTTGATTTTGTTCAG  Raphanus raphanistrum subsp. maritimus
EY915202       <-- CTCCTGTCTGAGTTCGTGAAAATGATTTTTCTCTGTTTGATTTTGTTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550185       <-- CTCCTGTCTGAGTTCGTGAAAATGATTTTTCTCTGTTTGATTTTGTTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896657       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD528930       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD934981       --> ..................................................  Raphanus sativus var. oleiformis
EW728512       --> TTCCTGTCTGAATTCGTGAAAATGATTTTTCTCTGTTTGATTTTGTTCA.  Raphanus sativus cv Early Scarlet Globe
EW720829       --> TTCCTGTCTGAATTCGTGAAAATGATTTTTCACTGTTTGATTTTGTTCAG  Raphanus sativus var. oleiformis
FY429375       --> TTCCTGTCTGAATTCGTGAAAATGATTTTTCTCTGTTTGATTTTGTTCAG  Raphanus sativus cv GSK3-1
EV541646       --> CTCCTGTCTGAGTTCGTGAAAATGATTTTTCTCTGTTTGATTTTGTTCAG  Raphanus raphanistrum subsp. raphanistrum (MS)
EW721461       --> ..................................................  Raphanus sativus var. oleiformis
EX751110       --> TTCCTGTCTGAATTCGTGAAAATGATTTTTCTCTGTTTGATTTTGTTCAG  Raphanus raphanistrum subsp. maritimus
EX892349       --> TTCCTGTCTGAATTCGTGAAAATGATTTTTCTCTGTTTGATTTTGTTC..  Raphanus sativus var. oleiformis
FD531093       --> TTCCTGTCTGAATTCGTGAAAATGATTTTTCTCTGTTTGATTTTGTTCAG  Raphanus raphanistrum subsp. maritimus
FY443870       --> TTCCTGTCTGAATTCGTGAAAATGATTTTTCTCTGTTTGATTTTGTTCAG  Raphanus sativus cv GSK3-1
EV545518       --> CTCCTGTCTGAGTTCGTGAAAATGATTTTTCTCTGTTTGATTTTGTTCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FY443751       --> TTCCTGTCTGAATTCGTGAAAATGATTTTTCTCTGTTTGATTTTGTTCAG  Raphanus sativus cv GSK3-1
EW721386       --> TTCCTGTCTGAATTCGTGAAAATGATTTTTCTCTGTTTGATTT.......  Raphanus sativus var. oleiformis
FY430361       --> TTCCTGTCTGAATTCGTGAAAATGATTTTTCTCTGTTTGATTTTG.....  Raphanus sativus cv GSK3-1
FY432607       --> TTCCTGTCTGAATTCGTGAAAATGATTTTTCTCTGTTTGATTTTG.....  Raphanus sativus cv GSK3-1
FD959195       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               751    -    801
UN26230        --> AAGGTTTCGTAGTTTGCTGTTAGGTTGGATCGAACCATACGGCAACCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532465       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV524888       <-- AAGGTTTCTTAGTTTGCTGTTAGGTT........................  Raphanus raphanistrum subsp. maritimus
EX746785       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FY429651       <-- AAGGTTTCGTAGTTTGCTGTTAGGTTGGATCGAACCATACGGCAACCTTC  Raphanus sativus cv GSK3-1
FY428146       <-- AAGGTTTCGTAGTTTGCTGTTAGGTTGGATCGAACCATACGGCAACCTTC  Raphanus sativus cv GSK3-1
FY436414       <-- AAGGTTTCGTAGTTTGCTGTTAGGTTGGATCGAACCATACGGCAACCTTC  Raphanus sativus cv GSK3-1
FY433065       <-- AAGGTTTCGTAGTTTGCTGTTAGGTTGGATCGAACCATACGGCAACCTTC  Raphanus sativus cv GSK3-1
FY441455       <-- AAGGTTTCGTAGTTTGCTGTTAGGTTGGATCGAACCATACGGCAACCTTC  Raphanus sativus cv GSK3-1
FY428289       <-- AAGGTTTCGTAGTTTGCTGTTAGGTTGGATCGAACCATACGGCAACCTTC  Raphanus sativus cv GSK3-1
FY442489       <-- AAGGTTTCGTAGTTTGCTGTTAGGTTGGATCGAACCATACGGCAACCTTC  Raphanus sativus cv GSK3-1
FY452136       <-- AAGGTTTCGTAGTTTGCTGTTAGGTTGGATCGAACCATACGGCAACCTTC  Raphanus sativus cv GSK3-1
FY437511       <-- AAGGTTTCGTAGTTTGCTGTTAGGTTGGATCGAACCATACGGCAACCTTC  Raphanus sativus cv GSK3-1
FY453831       <-- AAGGTTTCGTAGTTTGCTGTTAGGTTGGATCGAACCATACGGCAACCTTC  Raphanus sativus cv GSK3-1
EV550109       <-- AAGGTTTCTTAGTTTGCTGTTAGGTTGGATCGAACCATACGGCAACCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717559       <-- AAGGTTTCGTAGTTTGCTGTTAGGTTGGATCGAACCATACGGCAACCTTC  Raphanus sativus var. oleiformis
EW716948       <-- AAGGTTTCGTAGTTTGCTGTTAGGTTGGATCGAACCATACGGCAACCTTC  Raphanus sativus var. oleiformis
EW715610       <-- AAGGTTTCGTAGTTTGCTGTTAGGTTGGATCGAACCATACGGCAACCTTC  Raphanus sativus var. oleiformis
EW717205       <-- AAGGTTTCGTAGTTTGCTGTTAGGTTGGATCGAACCATACGGCAACCTTC  Raphanus sativus var. oleiformis
FY450577       <-- AAGGTTTCGTAGTTTGCTGTTAGGTTGGATCGAACCATACGGCAACCTTC  Raphanus sativus cv GSK3-1
EY901317       <-- AAGGTTTCGTAGTTTGCTGTTAGGTTGGATCGAACCATACGGCAACCTTC  Raphanus raphanistrum subsp. maritimus
FD535432       <-- AATGTTTCGTAGTTTGCTGTTAGGTTGGATCGAACCATACGGCAACCTTC  Raphanus raphanistrum subsp. maritimus
EW724033       <-- AAGGTTTCGTAGTTTGCTGTTAGGTTGGATCGAACCATACGGCAACCTTC  Raphanus sativus cv Early Scarlet Globe
FD938664       <-- AAGGTTTCGTAGTTTGCTGTTAGGTTGGATCGAACCATACGGCAACCTTC  Raphanus sativus var. oleiformis
FD962706       <-- AAGGTTTCGTAGTTTGCTGTTAGGTTGGATCGAACCATACGGCAACCTTC  Raphanus raphanistrum subsp. maritimus
EY915202       <-- AAGGTTTCTTAGTTTGCTGTTAGGTTGGATCGAACCATACGGAAACCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550185       <-- AAGGTTTCTTAGTTTGCTGTTAGGTTGGATCGAACCATACGGCAACCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896657       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD528930       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD934981       --> ..................................................  Raphanus sativus var. oleiformis
EW728512       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW720829       --> AAGGTTTCGTAGTTTGCTGTTAGGTTGGATCGAAC-ATACGGCAACCTTC  Raphanus sativus var. oleiformis
FY429375       --> AAGGTTTCGTAGTTTGCTGTTAGGTTGGATCGAACCATACGGCAACCTT.  Raphanus sativus cv GSK3-1
EV541646       --> AAGGTTTCGTAGTTTGCTGTTAGGTTGGATCGAACCATACGGCAACCTCC  Raphanus raphanistrum subsp. raphanistrum (MS)
EW721461       --> ..................................................  Raphanus sativus var. oleiformis
EX751110       --> AAGGTTTCGTAGTTTGCTGTTAGGTTGGATCGAACCATACGGCAACCTTC  Raphanus raphanistrum subsp. maritimus
EX892349       --> ..................................................  Raphanus sativus var. oleiformis
FD531093       --> AA................................................  Raphanus raphanistrum subsp. maritimus
FY443870       --> AAGGTTTCGTAGTTTGCTGTTAGGTTGGATCGAACCATACGGCAACCTTC  Raphanus sativus cv GSK3-1
EV545518       --> AAGGTTTCTTAGTTTGCTGTTAGGTTGGATCGAACCATACGGCAACCTTC  Raphanus raphanistrum subsp. raphanistrum (NY)
FY443751       --> AAGGTTTCGTAGTTTGCTGTTAGGTTGGATCGAACCATACGGCAACCTTC  Raphanus sativus cv GSK3-1
EW721386       --> ..................................................  Raphanus sativus var. oleiformis
FY430361       --> ..................................................  Raphanus sativus cv GSK3-1
FY432607       --> ..................................................  Raphanus sativus cv GSK3-1
FD959195       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               801    -    851
UN26230        --> CGTGCACGACACTGTGATATTCATCAGGATGAACATCGTGACCTAATGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532465       <-- ..................................................
EV524888       <-- ..................................................
EX746785       <-- ..................................................
FY429651       <-- CGTGCACGACACTGTGATATTCATCAGGATGAACATCGTGACCTAATGCC
FY428146       <-- CGTGCACGACACTGTGATATTCATCAGGATGAACATCGTGACCTAATGCC
FY436414       <-- CGTGCACGACACTGTGATATTCATCAGGATGAACATCGTGACCTAATGCC
FY433065       <-- CGTGCACGACACTGTGATATTCATCAGGATGAACATCGTGACCTAATGCC
FY441455       <-- CGTGCACGACACTGTGATATTCATCAGGATGAACATCGTGACCTAATGCC
FY428289       <-- CGTGCACGACACTGTGATATTCATCAGGATGAACATCGTGACCTAATGCC
FY442489       <-- CGTGCACGACACTGTGATATTCATCAGGATGAACATCGTGACCTAATGCC
FY452136       <-- CGTGCACGACACTGTGATATTCATCAGGATGAACATCGTGACCTAATGCC
FY437511       <-- CGTGCACGACACTGTGATATTCATCAGGATGAACATCGTGACCTAATGCC
FY453831       <-- CGTGCACGACACTGTGATATTCATCAGGATGAACATCGTGACCTAATGCC
EV550109       <-- CGTGCACGACACTGTGATATTCATCAGGATGAACATCGTGACCTAATGCC
EW717559       <-- CGTGCACGACACTGTGATATTCATCAGGATGAACATCGTGACCTAATGCC
EW716948       <-- CGTGCACGACACTGTGATATTCATCAGGATGAACATCGTGACCTAATGCC
EW715610       <-- CGTGCACGACACTGTGATATTCATCAGGATGAACATCGTGACCTAATGCC
EW717205       <-- CGTGCACGACACTGTGATATTCATCAGGATGAACATCGTGACCTAATGCC
FY450577       <-- CGTGCACGACACTGTGATATTCATCAGGATGAACATCGTGACCTAATGCC
EY901317       <-- CGTGCACGACACTGTGATATTCATCAGGATGAACATCGTGACCTAATGCC
FD535432       <-- CGTGCACGACACTGTGATATTCATCAGGATGAACATCGTGACCTAATGCC
EW724033       <-- CGTGCACGACACTGTGATATTCATCAGGATGAACATCGTGACCTAATGCC
FD938664       <-- CGTGCACGACACTGTGATATTCATCAGGATGAACATCGTGACCTAATGCC
FD962706       <-- CGTGCACGACACTGTGATATTCATCAGGATGAACATCGTGACCTAATGCC
EY915202       <-- CGTGCACGACACTGTGATATTCATCAGGATGAACATCGTGACCTAATGCC
EV550185       <-- CGTGCACGACACTGTGATATTCATCAGGATGAACATCGTGACCTAATGCC
EY896657       --> ..................................................
FD528930       --> ..................................................
FD934981       --> ..................................................
EW728512       --> ..................................................
EW720829       --> CGTGCACGACACTGTGATATTCATCAG-ATGAACATCGTGACCTA-TGCC
FY429375       --> ..................................................
EV541646       --> CGTGCACGACACTGTGATATTCATCAGGATGAACATCGTGAC........
EW721461       --> ..................................................
EX751110       --> CGTGCACGACACTGTGAT................................
EX892349       --> ..................................................
FD531093       --> ..................................................
FY443870       --> CGTGCACGACACTGTGATATTCATCAGGATGAACATCGTGACCTAATGCC
EV545518       --> CGTGCACGACACTGTGATATTCA...........................
FY443751       --> CGTGCACGACACTGTGATATTCATCAGGATGAACATCGTGACCTAATGCC
EW721386       --> ..................................................
FY430361       --> ..................................................
FY432607       --> ..................................................
FD959195       --> ..................................................

               851    -    901
UN26230        --> CTAAGACCAGCGAGAGTACTTCCATAAGTCTTGAAGAGTTCAACTCTTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532465       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV524888       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EX746785       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FY429651       <-- CTAAGACCAGCGAGAGTACTTCCATAAGTCTTGAAGAGTTCAACTCTTAG  Raphanus sativus cv GSK3-1
FY428146       <-- CTAAGACCAGCGAGAGTACTTCCATAAGTCTTGAAGAGTTCAACTCTTAG  Raphanus sativus cv GSK3-1
FY436414       <-- CTAAGACCAGCGAGAGTACTTCCATAAGTCTTGAAGAGTTCAACTCTTAG  Raphanus sativus cv GSK3-1
FY433065       <-- CTAAGACCAGCGAGAGTACTTCCATAAGTCTTGAAGAGTTCAACTCTTAG  Raphanus sativus cv GSK3-1
FY441455       <-- CTAAGACCAGCGAGAGTACTTCCATAAGTCTTGAAGAGTTCAACTCTTAG  Raphanus sativus cv GSK3-1
FY428289       <-- CTAAGACCAGCGAGAGTACTTCCATAAGTCTTGAAGAGTTCAACTCTTAG  Raphanus sativus cv GSK3-1
FY442489       <-- CTAAGACCAGCGAGAGTACTTCCATAAGTCTTGAAGAGTTCAACTCTTAG  Raphanus sativus cv GSK3-1
FY452136       <-- CTAAGACCAGCGAGAGTACTTCCATAAGTCTTGAAGAGTTCAACTCTTAG  Raphanus sativus cv GSK3-1
FY437511       <-- CTAAGACCAGCGAGAGTACTTCCATAAGTCTTGAAGAGTTCAACTCTTAG  Raphanus sativus cv GSK3-1
FY453831       <-- CTAAGACCAGCGAGAGTACTTCCATAAGTCTTGAAGAGTTCAACTCTTAG  Raphanus sativus cv GSK3-1
EV550109       <-- CTGAGACCAGCGAGAGTACTTCCATAAGTCTTGAAGAGTTCAACTCTTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EW717559       <-- CTAAGACCAGCGAGAGTACTTCCATAAGTCTTGAAGAGTTCAACTCTTAG  Raphanus sativus var. oleiformis
EW716948       <-- CTAAGACCAGCGAGAGTACTTCCATAAGTCTTGAAGAGTTCAACTCTTAG  Raphanus sativus var. oleiformis
EW715610       <-- CTAAGACCAGCGAGAGTACTTCCATAAGTCTTGAAGAGTTCAACTCTTAG  Raphanus sativus var. oleiformis
EW717205       <-- CTAAGACCAGCGAGAGTACTTCCATAAGTCTTGAAGAGTTCAACTCTTAG  Raphanus sativus var. oleiformis
FY450577       <-- CTAAGACCAGCGAGAGTACTTCCATAAGTCTTGAAGAGTTCAACTCTTAG  Raphanus sativus cv GSK3-1
EY901317       <-- CTGAGACCAGCGGGAGTACTTCCATAAGTCTTGAAGAGTTCAACTCTTAG  Raphanus raphanistrum subsp. maritimus
FD535432       <-- CTGAGACCAGCGAGAGTACTTCCATAAGTCTTGAAGAGTTCAACTCTTAG  Raphanus raphanistrum subsp. maritimus
EW724033       <-- CTGAGACCAGCGAGAGTACTTCCATAAGTCTTGAAGAGTTCAACTCTTAG  Raphanus sativus cv Early Scarlet Globe
FD938664       <-- CTGAGACCAGCGAGAGTACTTCCATAAGTCTTGAAGAGTTCAACTCTTAG  Raphanus sativus var. oleiformis
FD962706       <-- CTGAGACCAGCGAGAGTACTTCCATAAGTCTTGAAGAGTT-AACTCTTAG  Raphanus raphanistrum subsp. maritimus
EY915202       <-- CTGAGACCAGCGAGAGTACTTCCATAAGTCTTGAAGAGTTCAACTCTTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EV550185       <-- CTGAGACCAGCGAGAGTACTTCCATAAGTCTTGAAGAGTTCAACTCTTAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY896657       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD528930       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD934981       --> ..................................................  Raphanus sativus var. oleiformis
EW728512       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
EW720829       --> CTAAGACCAGCGAGAGTACTTCCATAAGTCTTGAAGAGTcactctt....  Raphanus sativus var. oleiformis
FY429375       --> ..................................................  Raphanus sativus cv GSK3-1
EV541646       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
EW721461       --> ..................................................  Raphanus sativus var. oleiformis
EX751110       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EX892349       --> ..................................................  Raphanus sativus var. oleiformis
FD531093       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FY443870       --> CTAAGACCAGCGAGAGTACTTCCATAAGTCTTGAAGAGTTCAACTCTTAG  Raphanus sativus cv GSK3-1
EV545518       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FY443751       --> CTAAGACCAGCGAGAGTACTTCCATAAGTCTTGAAGAGTTCAACTCTTA.  Raphanus sativus cv GSK3-1
EW721386       --> ..................................................  Raphanus sativus var. oleiformis
FY430361       --> ..................................................  Raphanus sativus cv GSK3-1
FY432607       --> ..................................................  Raphanus sativus cv GSK3-1
FD959195       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               901    -    951
UN26230        --> GCTTGAAGCTTTACTTTCAGAGAATCCAAACTT-CTCCATTAGAAAATCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532465       <-- ..................................................
EV524888       <-- ..................................................
EX746785       <-- ..................................................
FY429651       <-- GCTTGAAGCTTTACTTTCAGAGAATCCAAACTT-CTCCATTAGAAAATCG
FY428146       <-- GCTTGAAGCTTTACTTTCAGAGAATCCAAACTT-CTCCATTAGAAAATCG
FY436414       <-- GCTTGAAGCTTTACTTTCAGAGAATCCAAACTT-CTCCATTAGAAAATCG
FY433065       <-- GCTTGAAGCTTTACTTTCAGAGAATCCAAACTT-CTCCATTAGAAAATCG
FY441455       <-- GCTTGAAGCTTTACTTTCAGAGAATCCAAACTT-CTCCATTAGAAAATCG
FY428289       <-- GCTTGAAGCTTTACTTTCAGAGAATCCAAACTT-CTCCATTAGAAAATCG
FY442489       <-- GCTTGAAGCTTTACTTTCAGAGAATCCAAACTT-CTCCATTAGAAAATCG
FY452136       <-- GCTTGAAGCTTTACTTTCAGAGAATCCAAACTT-CTCCATTAGAAAATCG
FY437511       <-- GCTTGAAGCTTTACTTTCAGAGAATCCAAACTT-CTCCATTAGAAAATCG
FY453831       <-- GCTTGAAGCTTTACTTTCAGAGAATCCAAACTT-CTCCATTAGAAAATCG
EV550109       <-- GCTTGAAGCTTTACTTTCAGAGAATCCAAACTT-CTCCATTAGAAAATCG
EW717559       <-- GCTTGAAGCTTTACTTTCAGAGAATCCAAACTT-CTCCATTAGAAAATCG
EW716948       <-- GCTTGAAGCTTTACTTTCAGAGAATCCAAACTT-CTCCATTAGAAAATCG
EW715610       <-- GCTTGAAGCTTTACTTTCAGAGAATCCAAACTT-CTCCATTAGAAAATCG
EW717205       <-- GCTTGAAGCTTTACTTTCAGAGAATCCAAACTT-CTCCATTAGAAAATCG
FY450577       <-- GCTTGAAGCTTTACTTTCAGAGAATCCAAACTT-CTCCATTAGAAAATCG
EY901317       <-- GCTTGAAGCTTTACTTTCAGAGAATCCAAACTT-CTCCATTAGAAAACCG
FD535432       <-- GCTTGAAGCTTTACTTTCAGAGAATCCAAACTT-CTCCATTAGAAAATCG
EW724033       <-- GGTTGAAG-TTTACTTTCAGAGAATCCAAACTT-CTCCATTAGAAAATCG
FD938664       <-- GCTTGAAGCTTTACTTTCAGAGAATCCAAACTT-CTCCATTAGAAAATCG
FD962706       <-- GCTTGAAACTTTACTTTCAGAGAATCCAAACTT-CTCCATTAGAAAATCG
EY915202       <-- GCTTGAAGCTTTACTTTCAGAGAATCCAAACTT-CTCCATTAGAAAATCG
EV550185       <-- GCTTGAAGCTTTACTTTCAGAGAATCCAAACTT-CTCCATTAGAAAATCG
EY896657       --> ..................................................
FD528930       --> ..................................................
FD934981       --> ..................................................
EW728512       --> ..................................................
EW720829       --> ..................................................
FY429375       --> ..................................................
EV541646       --> ..................................................
EW721461       --> ..................................................
EX751110       --> ..................................................
EX892349       --> ..................................................
FD531093       --> ..................................................
FY443870       --> GCTTGAAGCTTTACTTTCAGAGAATCCAAACTTTCTCCATTAGAAAATCG
EV545518       --> ..................................................
FY443751       --> ..................................................
EW721386       --> ..................................................
FY430361       --> ..................................................
FY432607       --> ..................................................
FD959195       --> ..................................................

               951    -   1001
UN26230        --> TCGATGTTTTTCTTGACGGCTGGAGCTATTCCCGTTTTCAGAGGGTATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532465       <-- ..................................................
EV524888       <-- ..................................................
EX746785       <-- ..................................................
FY429651       <-- TCGATGTTTTTCTTGACGGCTGGAGCTATTCCCGTTTTCAGAGGGTATAA
FY428146       <-- TCGATGTTTTTCTTGACGGCTGGAGCTATTCCCGTTTTCAGAGGGTATAA
FY436414       <-- TCGATGTTTTTCTTGACGGCTGGAGCTATTCCCGTTTTCAGAGGGTATAA
FY433065       <-- TCGATGTTTTTCTTGACGGCTGGAGCTATTCCCGTTTTCAGAGGGTATAA
FY441455       <-- TCGATGTTTTTCTTGACGGCTGGAGCTATTCCCGTTTTCAGAGGGTATAA
FY428289       <-- TCGATGTTTTTCTTGACGGCTGGAGCTATTCCCGTTTTCAGAGGGTATAA
FY442489       <-- TCGATGTTTTTCTTGACGGCTGGAGCTATTCCCGTTTTCAGAGGGTATAA
FY452136       <-- TCGATGTTTTTCTTGACGGCTGGAGCTATTCCCGTTTTCAGAGGGTATAA
FY437511       <-- TCGATGTTTTTCTTGACGGCTGGAGCTATTCCCGTTTTCAGAGGGTATAA
FY453831       <-- TCGATGTTTTTCTTGACGGCTGGAGCTATTCCCGTTTTCAGAGGGTATAA
EV550109       <-- TCAATGTTTTTCTTGACGGCCGGAGCTATTCCCGTTTTCAGAGGGTATAA
EW717559       <-- TCGATGTTTTTCTTGACGGCTGGAGCTATTCCCGTTTTCAGAGGGTATAA
EW716948       <-- TCGATGTTTTTCTTGACGGCTGGAGCTATTCCCGTTTTCAGAGGGTATAA
EW715610       <-- TCGATGTTTTTCTTGACGGCTGGAGCTATTCCCGTTTTCAGAGGGTATAA
EW717205       <-- TCGATGTTTTTCTTGACGGCTGGAGCTATTCCCGTTTTCAGAGGGTATAA
FY450577       <-- TCGATGTTTTTCTTGACGGCTGGAGCTATTCCCGTTTTCAGAGGGTATAA
EY901317       <-- TCGATGTTTTTCTTGACGGCTGGAGCTATTCCCGTTTTCAGAGGGTATAA
FD535432       <-- TCGATGTTTTTCTTGACGGCTGGAGCTATTCCCGTTTTCAGAGGGTATAA
EW724033       <-- TCGATGTTTTTCTTGACGGCTGGAGCTATTCCCGTTTTCAGAGGGTATAA
FD938664       <-- TCGATGTTTTTCTTGACGGCTGGAGCTATTCCCGTTTTCAGAGGGTATAA
FD962706       <-- TCGATGTTTTTCTTGGCGGCTGGAGCTATTCCCGTTTTCAGAGGGTATAA
EY915202       <-- TCAATGTTTTTCTTGACGGCCGGAGCTATTCCAGTTTTCAGAGGGTATAA
EV550185       <-- TCAATGTTTTTCTTGACGGCCGGAGCTATTCCCGTTTTCAGAGGGTATAA
EY896657       --> ..................................................
FD528930       --> ..................................................
FD934981       --> ..................................................
EW728512       --> ..................................................
EW720829       --> ..................................................
FY429375       --> ..................................................
EV541646       --> ..................................................
EW721461       --> ..................................................
EX751110       --> ..................................................
EX892349       --> ..................................................
FD531093       --> ..................................................
FY443870       --> TCGATGTTTT........................................
EV545518       --> ..................................................
FY443751       --> ..................................................
EW721386       --> ..................................................
FY430361       --> ..................................................
FY432607       --> ..................................................
FD959195       --> ..................................................

               1001   -   1051
UN26230        --> TGTGTCATCCAAATCGAAAATGAGGCAGTTGATCGGGGAGGAAGCCATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532465       <-- ..................................................
EV524888       <-- ..................................................
EX746785       <-- ..................................................
FY429651       <-- TGTGTCATCCAAATCGAAAATGAGGCAGTTGATCGGGGAGGAAGCCATTA
FY428146       <-- TGTGTCATCCAAATCGAAAATGAGGCAGTTGATCGGGGAGGAAGCCATTA
FY436414       <-- TGTGTCATCCAAATCGAAAATGAGGCAGTTGATCGGGGAGGAAGCCATTA
FY433065       <-- TGTGTCATCCAAATCGAAAATGAGGCAGTTGATCGGGGAGGAAGCCATTA
FY441455       <-- TGTGTCATCCAAATCGAAAATGAGGCAGTTGATCGGGGAGGAAGCCATTA
FY428289       <-- TGTGTCATCCAAATCGAAAATGAGGCAGTTGATCGGGGAGGAAGCCATTA
FY442489       <-- TGTGTCATCCAAATCGAAAATGAGGCAGTTGATCGGGGAGGAAGCCATTA
FY452136       <-- TGTGTCATCCAAATCGAAAATGAGGCAGTTGATCGGGGAGGAAGCCATTA
FY437511       <-- TGTGTCATCCAAATCGAAAATGAGGCAGTTGATCGGGGAGGAAGCCATTA
FY453831       <-- TGTGTCATCCAAATCGAAAATGAGGCAGTTGATCGGGGAGGAAGCCATAC
EV550109       <-- TGTGTCATCCAAATCGAAAATGAGGCAGTTGATCGGGGAGGAAGCCATTG
EW717559       <-- TGTGTCATCCAAATCGAAAATGAGGCAGTTGATCGGGGAGGAAGCCATTA
EW716948       <-- TGTGTCATCCAAATCGAAAATGAGGCAGTTGATCGGGGAGGAAGCCATTA
EW715610       <-- TGTGTCATCCAAATCGAAAATGAGGCAGTTGATCGGGGAGGAAGCCATTA
EW717205       <-- TGTGTCATCCAAATCGAAAATGAGGCAGTTGATCGGGGAGGAAGCCATTA
FY450577       <-- TGTGTCATCCAAATCGAAAATGAGGCAGTTGATCGGGGAGGAAGCCATTA
EY901317       <-- TGTGTCATCCAAATCGAAAATGAGGCAGTTGATCGGGGAGGAAGCCATTA
FD535432       <-- TGTGTCATCCAAATCGAAAATGAGGCAGTTGATCGGGGAGGAAGCCATTA
EW724033       <-- TGTGTCATCCAAATCGAAAATGAGGCAGTTGATCGGGGAGGAAGCCATTA
FD938664       <-- TGGGTCATCCAAATCGAAAATGAGGCAGTTGATCGGGGAGGAAGCCATTA
FD962706       <-- TGTGTCATCCAAATCGAAAATGAGGCAGTTGATCGGGGAGGAAGCCATTA
EY915202       <-- TGTGTCATCCAAATCGAAAATGAGGCAGTTGATCGGGGAGGAAGCCATTA
EV550185       <-- TGTGTCATCCAAATCGAAAATGAGGCAGTTGATCGGGGAGGAAGCCATTA
EY896657       --> ..................................................
FD528930       --> ..................................................
FD934981       --> ..................................................
EW728512       --> ..................................................
EW720829       --> ..................................................
FY429375       --> ..................................................
EV541646       --> ..................................................
EW721461       --> ..................................................
EX751110       --> ..................................................
EX892349       --> ..................................................
FD531093       --> ..................................................
FY443870       --> ..................................................
EV545518       --> ..................................................
FY443751       --> ..................................................
EW721386       --> ..................................................
FY430361       --> ..................................................
FY432607       --> ..................................................
FD959195       --> ..................................................

               1051   -   1101
UN26230        --> CAAGAAAATAAAGTAAGCAAAAATACTGTTTTCAATATTTGAGAAAATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532465       <-- ..................................................
EV524888       <-- ..................................................
EX746785       <-- ..................................................
FY429651       <-- CAAGAAAATAAAGTAAGCAAAAATACT.......................
FY428146       <-- CAAGAAAATAAAGTAAGCAAA.............................
FY436414       <-- CAAGAAAATAAAGTAAGCAAAAATACTG......................
FY433065       <-- CAAGAAAATAAAGTAAGCAAAAATACTGTTT-CAATATTgag........
FY441455       <-- CAAGAAAATAAAGTAAGCAAA.............................
FY428289       <-- CAAGAAAATAAAGTAAGCAAAAATACTG......................
FY442489       <-- CAAGAAAATAAAGTAAGCAAAAATACTGTTTTCAATATT-GAGAAA....
FY452136       <-- CAAGAAAATAAAGTAAGCAAAAATACTGTTT-CAATATT-GAGAAA....
FY437511       <-- CAAGAAAATAAAGTAAGCAAAAATACTGTTTTCAATATTgag........
FY453831       <-- GAAGAAAATAAAGTAAGCAAAAATACTGTTT-CAATATT-GAGAAA....
EV550109       <-- CAAGAAAATAAAGTAAGCAAAAATACTGTTTTTAATATTTGAGAAAATGG
EW717559       <-- CAAGAAAATAAAGTAAGCAAAAATACTGTTTTCAATATTTGAGAAAATGG
EW716948       <-- CAAGAAAATAAAGTAAGCAAAAATACTGTTTTCAATATTTGAGAAAATGG
EW715610       <-- CAAGAAAATAAAGTAAGCAAAAATACTGTTTTCAATATTTGAGAAAATGG
EW717205       <-- CAAGAAAATAAAGTAAGCAAAAATACTGTTTTCAATATTTGAGAAAATGG
FY450577       <-- CAAGAAAATAAAGTAAGCAAAAATACTGTTTTCAATATTg..........
EY901317       <-- CAAGAAAATAAAGTAAGCAAAAATACTGTTTTCAATATTTGAGAAAATGG
FD535432       <-- CAGGAAAATAAAGTAAGCAAAAATACTGTTTTCAATATTTGAGAAAATGG
EW724033       <-- CAAGAAAATAAAGTAAGCAAAAATACTGTTTTCAATATTTGAGAAAATGG
FD938664       <-- CAAGAAAATAAAGTAAGCAAAAATACTGTTTTCAATATTTGAGAAAATGG
FD962706       <-- CAAGAAAATAAAGTAAGCAAAAATACTGTTTTCAATATTTGAGAAAATGG
EY915202       <-- CAAGAAAATAAAGTAAGCAAAAATACTGTTTTCAATATTTGAGAAAATGG
EV550185       <-- CAAGAAAATAAAGTAAGCAAAAATACTGTTTTCAATATTTGAGAAAATGG
EY896657       --> ..................................................
FD528930       --> ..................................................
FD934981       --> ..................................................
EW728512       --> ..................................................
EW720829       --> ..................................................
FY429375       --> ..................................................
EV541646       --> ..................................................
EW721461       --> ..................................................
EX751110       --> ..................................................
EX892349       --> ..................................................
FD531093       --> ..................................................
FY443870       --> ..................................................
EV545518       --> ..................................................
FY443751       --> ..................................................
EW721386       --> ..................................................
FY430361       --> ..................................................
FY432607       --> ..................................................
FD959195       --> ..................................................

               1101   -   1151
UN26230        --> AGTAAATAACAAAACAAAGAGGAAGAGGCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD532465       <-- ...............................
EV524888       <-- ...............................
EX746785       <-- ...............................
FY429651       <-- ...............................
FY428146       <-- ...............................
FY436414       <-- ...............................
FY433065       <-- ...............................
FY441455       <-- ...............................
FY428289       <-- ...............................
FY442489       <-- ...............................
FY452136       <-- ...............................
FY437511       <-- ...............................
FY453831       <-- ...............................
EV550109       <-- AGTAAATAACAAAACAAAGAGGAAGAGGCCC
EW717559       <-- AGTAAATAACAAAACAAAGAGGAAGAGGCCC
EW716948       <-- AGTAAATAACAAAACAAAGAGGAAGAGGCCC
EW715610       <-- AGTAAATAACAAAACAAAGAGGAAGAGGCCC
EW717205       <-- AGTAAATAACAAAACAAAGAGGAAGAGGCCC
FY450577       <-- ...............................
EY901317       <-- AGTAAATAACAAAACAAAGAGGAAGAGGCC.
FD535432       <-- AGTAAATAACAAAACAAAGAGGAAGAGGCCC
EW724033       <-- AGTAAATAACAAAACAAAGAGGAAGAGGCCC
FD938664       <-- AGTAAATAACAAAACAAAGAGGAAGAGGCCC
FD962706       <-- AGTAAATAACAAAACAAAGAGGAAGAGGCCC
EY915202       <-- AGTAAATAACAAAACAAAGAGGAAGAGGCCC
EV550185       <-- AGTAAATAACAAAACAAAGAGGAAGAGGCCC
EY896657       --> ...............................
FD528930       --> ...............................
FD934981       --> ...............................
EW728512       --> ...............................
EW720829       --> ...............................
FY429375       --> ...............................
EV541646       --> ...............................
EW721461       --> ...............................
EX751110       --> ...............................
EX892349       --> ...............................
FD531093       --> ...............................
FY443870       --> ...............................
EV545518       --> ...............................
FY443751       --> ...............................
EW721386       --> ...............................
FY430361       --> ...............................
FY432607       --> ...............................
FD959195       --> ...............................