-13    -     37
UN26249        --> ..............GGAAGCGCCTCAACCTCACCGCCTTCTTGAGCTACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD983309       <-- ...............GAAGCGCCTCAACCTCACCGCTTTCTTGAGCTACC
EY935740       <-- .......ggaagcgcctctagaataAACCTCACCGCCTTCTTGAGCTACC
FD985553       <-- ..................................................
EY894424       <-- ..................................................
FD576073       <-- ..................................................
EY896385       <-- ..................................................
FD944383       <-- ..................................................
FD555552       <-- ..................................................
EX753736       <-- ..................................................
FD947465       <-- ..................................................
EV526240       --> ..............GGAAGCGCCTCAACCTCACCGCCTTCTTGAGCTACC
EY898059       --> ..............GGAAGCGCCTCAACCTCACCGCCTTCTTGAGCTACC
EY898342       --> ..............GGAAGCGCCTCAACCTCACCGCCTTCTTGAGCTACC
FD560131       --> ..............GGAAGCGCCTCAACCTCACCGCCTTCTTGAGCTACC
EY898753       --> ...............GAAGCGCCTCAACCTCACCGCCTTCTTGAGCTACC
FD987223       --> ...............GAAGCGCCTCAACCTCACCGCCTTCTTGAGCTACC
EX750214       --> .......ggagggtttAAGCGCCTCAACCTCACCGCCTTCTTGAGCTACC
EY900239       --> .......ggagggtttAAGCGCCTCAACCTCACCGCCTTCTTGAGCTACC
EY900964       --> .......ggagggtttAAGCGCCTCAACCTCACCGCCTTCTTGAGCTACC
FD559916       --> ...ggactcagggtttAAGCGCCTCAACCTCACCGCCTTCTTGAGCTACC
EY939888       --> .......ggaagcgcctctagaataAACCTCACCGCCTTCTTGAGCTACC
FD572429       --> .......ggaagcgcctctagaataAACCTCACCGCCTTCTTGAGCTACC
FD948625       --> .......ggaagcgcctctagaataAACCTCACCGCCTTCTTGAGCTACC
FD949970       --> ggagggtttaagcgcctctggaataAACCTCACCGCCTTCTTGAGCTACC
FD943409       --> ..................................................

               37     -     87
UN26249        --> TCATCCCGTCGAGCTAATCTTCTCTCTCAGAAGCGTGAGTAATGAGGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD983309       <-- TCATCCCGTCGAGCTAATCTTCTCTCTCAGAAGCGTGAGTAATGAGGAAG  Raphanus raphanistrum subsp. landra
EY935740       <-- TCATCCCGTCAAGCTAATCTTCTCTCTCAGAAGCGTGAGTAATGAGGAAG  Raphanus sativus cv Early Scarlet Globe
FD985553       <-- ......................TCTCTCAGAAGCGTGAGTAATGAGGAAG  Raphanus raphanistrum subsp. landra
EY894424       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD576073       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY896385       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD944383       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD555552       <-- ..................................................  Raphanus raphanistrum subsp. landra
EX753736       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD947465       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV526240       --> TCATCCCGTCGAGCTAATCTTCTCTCTCAGAAGCGTGAGTAATGAGGAAG  Raphanus raphanistrum subsp. maritimus
EY898059       --> TCATCCCGTCGATCTAATCTTCTCTCTCAGAAGCGTGAGTAATGAGGAAG  Raphanus raphanistrum subsp. maritimus
EY898342       --> TCATCCCGTCGAGCTAATCTTCTCTCTCAGAAGCGTGAGTAATGAGGAAG  Raphanus raphanistrum subsp. maritimus
FD560131       --> TCATCCCGTCGAGCTAATCTTCTCTCTCAGAAGCGTGAGTAATGAGGAAG  Raphanus raphanistrum subsp. landra
EY898753       --> TCATCCCGTCGAGCTAATCTTCTCTCTCAGAAGCGTGAGTAATGAGGAAG  Raphanus raphanistrum subsp. maritimus
FD987223       --> TCATCCCGTCGAGCTAATCTTCTCTCTCAGAAGCGTGAGTAATGAGGAAG  Raphanus raphanistrum subsp. landra
EX750214       --> TCATCCCGTCGAGCTAATCTTCTCTCTCAGAAGCGTGAGTAATGAGGAAG  Raphanus raphanistrum subsp. maritimus
EY900239       --> TCATCCCGTCGAGCTAATCTTCTCTCTCAGAAGCGTGAGTAATGAGGAAG  Raphanus raphanistrum subsp. maritimus
EY900964       --> TCATCCCGTCGAGCTAATCTTCTCTCTCAGAAGCGTGAGTAATGAGGAAG  Raphanus raphanistrum subsp. maritimus
FD559916       --> TCATCCCGTCGAGCTAATCTTCTCTCTCAGAAGCGTGAGTAATGAGGAAG  Raphanus raphanistrum subsp. landra
EY939888       --> TCATCCCGTCAAGCTAATCTTCTCTCTCAGAAGCGTGAGTAATGAGGAAG  Raphanus sativus cv Early Scarlet Globe
FD572429       --> TCATCCCGTCAAGCTAATCTTCTCTCTCAGAAGCGTGAGTAATGAGGAAG  Raphanus sativus cv Early Scarlet Globe
FD948625       --> TCATCCCGTCAAGCTAATCTTCTCTCTCAGAAGCGTGAGTAATGAGGAAG  Raphanus sativus cv Early Scarlet Globe
FD949970       --> TCATCCCGTCAAGCTAATCTTCTCTCTCAGAAGCGTGAGTAATGAGGAAG  Raphanus sativus cv Early Scarlet Globe
FD943409       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               87     -    137
UN26249        --> CTCAAGTACCATGAGAAGAAGGTTCTGAAGAAAGTTAATTTCCTGGAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD983309       <-- CTCAAGTACCATGAGAAGAAGGTTCTGAAGAAAGTTAATTTCCTGGAATG
EY935740       <-- CTCAAGTACCATGAGAAGAAGGTTCTGAAGAAAGTTAATTTCCTGGAATG
FD985553       <-- CTCAAGTACCATGAGAAGAAGGTTCTGAAGAAAGTTAATTTCCTGGAATG
EY894424       <-- ..........................GAAGAAAGTTAATTTCCTGGAATG
FD576073       <-- ...............................AAGTTAATTTCCTGGAATG
EY896385       <-- ..................................................
FD944383       <-- ..................................................
FD555552       <-- ..................................................
EX753736       <-- ..................................................
FD947465       <-- ..................................................
EV526240       --> CTCAAGTACCATGAGAAGAAGGTTCTGAAGAAAGTTAATTTCCTGGAATG
EY898059       --> CTCAAGTACCATGAGAAGAAGGTTCTGAAGAAAGTTAATTTCCTGGAATG
EY898342       --> CTCAAGTACCATGAGAAGAAGGTTCTGAAGAAAGTTAATTTCCTGGAATG
FD560131       --> CTCAAGTACCATGAGAAGAAGGTTCTGAAGAAAGTTAATTTCTTGGAATG
EY898753       --> CTCAAGTACCATGAGAAGAAGGTTCTGAAGAAAGTTAATTTCCTGGAATG
FD987223       --> CTCAAGTACCATGAGAAGAAGGTTCTGAAGAAAGTTAATTTCCTGGAATG
EX750214       --> CTCAAGTACCATGAGGAGAAGGTTCTGAAGAAAGTTAATTTCCTGGAATG
EY900239       --> CTCAAGTACCATGAGAAGAAGGTTCTGAAGAAAGTTAATTTCCTGGAATG
EY900964       --> CTCAAGTACCATGAGAAGAAGGTTCTGAAGAAAGTTAATTTCCTGGAATG
FD559916       --> CTCAAGTACCATGAGAAGAAGGTTCTGAAGAAAGTTAATTTCCTGGAATG
EY939888       --> CTCAAGTACCATGAGAAGAAGGTTCTGAAGAAAGTTAATTTCCTGGAATG
FD572429       --> CTCAAGTACCATGAGAAGAAGGTTCTGAAGAAAGTTAATTTCCTGGAATG
FD948625       --> CTCAGGTACCATGAGAAGAAGGTTCTGAAGAAAGTTAATTTCCTGGAATG
FD949970       --> CTCAAGTACCATGAGAAGAAGGTTCTGAAGAAAGTTAATTTCCTGGAATG
FD943409       --> ..................................................

               137    -    187
UN26249        --> GAAAAGAGAACGTGGTCATCTCGAAAACCTCATCACGGGTCGTTACCACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD983309       <-- GAAAAGAGAACGTGGTCATCTCGAAAACCTCATCACGGGTCGTTACCACA
EY935740       <-- GAAAAGAGAACGTGGTCATCTCGAAAACCTCATCATGGGTCGTTACCACA
FD985553       <-- GAAAAGAGAACGTGGTCATCTCGAAAACCTCATCACGGGTCGTTACCACA
EY894424       <-- GAAAAGAGAACGTGGTCATCTCGAAAACCTCATCACGGGTCGTTACCACA
FD576073       <-- GAAAAGAGAACGTGGTCATCTCGAAAACCTCATCACGGGTCGTTACCACA
EY896385       <-- ...AAGAGAACGTGGTCATCTCGAAAACCTCATCACGGGTCGTTACCACA
FD944383       <-- .......................AAAACCTCATCACGGGTCGTTACCACA
FD555552       <-- .................................CACGGGTCGTTACCACA
EX753736       <-- .....................................GGTCGTTACCACA
FD947465       <-- ..................................................
EV526240       --> GAAAAGAGAACGTGGTCATCTCGAAAACCTCATCACGGGTCGTTACCACA
EY898059       --> GAAAAGAGAACGTGGTCATCTCGAAAACCTCATCACGGGTCGTTACCACA
EY898342       --> GAAAAGAGAACGTGGTCATCTCGAAAACCTCATCACGGGTCGTTACCACA
FD560131       --> GAAAAGAGAACGTGGTCATCTCGAAGACCTCATCACGGGTCGTTACCACA
EY898753       --> GAAAAGAGAACGTGGTCATCTCGAAAACCTCATCACGGGTCGTTACCACA
FD987223       --> GAAAAGAGAACGTGGTCATCTCGAAAACCTCATCACGGGTCGTTACCACA
EX750214       --> GAAAAGAGAACGTGGTCATCTCGAAAACCTCATCACGGGTCGTTACCACA
EY900239       --> GAAAAGAGAACGTGGTCATCACGAAAACCTCATCACGGGTCGTTACCACA
EY900964       --> GAAAAGAGAACGTGGTCATCTCGAAAACCTCATCACGGGTCGTTACCACA
FD559916       --> GAAAAGAGAACGTGGTCATCTCGAAAACCTCATCACGGGTCGTTACCACA
EY939888       --> GAAAAGAGAACGTGGTCATCTCGAAAACCTCATCATGGGTCGTTACCACA
FD572429       --> GAAAAGAGAACGTGGTCATCTCGAAAACCTCATCACGGGTCGTTACCACG
FD948625       --> GAAAAGAGAACGTGGTCATCTCGAAAACCTCATCACGGGTCGTTACCACA
FD949970       --> GAAAAGAGAACGTGGTCATCTCGAAAACCTCATCACGGGTCGTTACCACA
FD943409       --> ..................................................

               187    -    237
UN26249        --> TGGGTGGTCGTGACGACTACAAAAAA--TATTCAGGATTGAGTAGGATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD983309       <-- TGGGTGGTCGTGACGACTACAAAAAA--TATTCAGGATTGAGTAGGATGG
EY935740       <-- TGGGTGGTCGTGACGACTACAAAAAA--TATTCAGGATTGAGTAGGATGG
FD985553       <-- TGGGTGGTCGTGACGACTACAAAAAA--TATTCAGGATTGAGTAGGATGG
EY894424       <-- TGGGTGGTCGTGACGACTACAAAAAA--TATTCAGGATTGAGTAGGATGG
FD576073       <-- TGGGTGGTCGTGACGACTACAAAAAA-ATATTCAGGATTGAGTAGGATGG
EY896385       <-- TGGGTGGTCGTGACGACTACAAAAAA--TATTCAGGATTGAGTAGGATGG
FD944383       <-- TGGGTGGTCGTGACGACTACAAAAAA--TATTCAGGATTGAGTAGGATGG
FD555552       <-- TGGGTGGTCGTGACGACTACAAAAAA--TATTCAGGATTGAGTAGGATGG
EX753736       <-- TGGGTGGTCGTGACGACTACAAAAAA--TATTCAGGATTGAGTAGGATGG
FD947465       <-- ..................................................
EV526240       --> TGGGTGGTCGTGACGACTACAAAAAA--TATTCAGGATTGAGTAGGATGG
EY898059       --> TGGGTGGTCGTGACGACTACAAAAAA--TATTCAGGATTGAGTAGGATGG
EY898342       --> TGGGTGGTCGTGACGACTACAAAAAA--TATTCAGGATTGAGTAGGATGG
FD560131       --> TGGGTGGTCGTGACGACTACAAAAAA--TATTCAGGATTGAGTAGGATGG
EY898753       --> TGGGTGGTCGTGACGACTACAAAAAA--TATTCAGGATTGAGTAGGATGG
FD987223       --> TGGGTGGTCGTGACGACTACAAAAAA--TATTCAGGATTGAGTAGGATGG
EX750214       --> TGGGTGGTCGTGACGACTACAAAAAA--TATTCAGGATTGAGTAGGATGG
EY900239       --> TGGGTGGTCGTGACGACTACAAAAAAAATATTCAGGATTGAGTAGGATGG
EY900964       --> TGGGTGGTCGTGACGACTACAAAAAA--TATTCAGGATTGAGTAGGATGG
FD559916       --> TGGGTGGTCGTGACGACTACAAAAAA--TATTCAGGATTGAGTAGGATGG
EY939888       --> TGGGTGGTCGTGACGACTACAAAAAA--TATTCAGGATTGAGTAGGATGG
FD572429       --> TGGGTGGTCGTGACGACTACAAAAAAa.......................
FD948625       --> TGGGTGGTCGTGACGACTACAAAAAA--TATTCAGGATTGAGTAGGATGG
FD949970       --> TGGGTGGTCGTGACGACTACAAAAAA--TATTCAGGATTGAGTAGGATGG
FD943409       --> ..................................................

               237    -    287
UN26249        --> TTCAGAAGCTGACGAATGTATTGAAACAGATGGATGCAACTGATCCTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD983309       <-- TTCAGAAGCTGACGAATGTATTGAAACAGATGGATGCAACTGATCCTTTT
EY935740       <-- TTCAGAAGCTGACGAATGTATTGAAACAGATGGATGCAACTGATCCTTTT
FD985553       <-- TTCAGAAGCTGACGAATGTATTGAAACAGATGGATGCAACTGATCCTTTT
EY894424       <-- TTCAGAAGCTGACGAATGTATTGAAACAGATGGATGCAACTGATCCTTTT
FD576073       <-- TTCAGAAGCTGACGAATGTATTGAAAGAGATGGATGCAACTGATCCTTTT
EY896385       <-- TTCAGAAGCTGACGAATGTATTGAAACAGATGGATGCAACTGATCCTTTT
FD944383       <-- TTCAGAAGCTGACGAATGTATTGAAACAGATGGATGCAACTGATCCTTTT
FD555552       <-- TTCAGAAGCTGACGAATGTATTGAAACAGATGGATGCAACTGATCCTTTT
EX753736       <-- TTCAGAATCTGACGAATGTATTGAAACAGATGGATGCAACTGATCCTTTT
FD947465       <-- ..................................................
EV526240       --> TTCAGAAGCTGACGAATGTATTGAAACAGATGGATGCAACTGATCCTTTT
EY898059       --> TTCAGAAGCTGACGAATGTATTGAAACAGATGGATGCAACTGATCCTTTT
EY898342       --> TTCAGAAGCTGACGAATGTATTGAAACAGATGGATGCAACTGATCCTTTT
FD560131       --> TTCAGAAGCTGACGAATGTATTGAAACAGATGGATGCAACTGATCCTTTT
EY898753       --> TTCAGAAGCTGACGAATGTATTGAAACAGATGGATGCAACTGATCCTTTT
FD987223       --> TTCAGAAGCTGACGAATGTATTGAAACAGATGGATGCAACTGATCCTTTT
EX750214       --> TTCAGAATCTGACGAATGTATTGAAACAGATGGATGCAACTGATCCTTTT
EY900239       --> TTCAGAAGCTGACGAATGTATTGAAACAGATGGATGCAACTGATCCTTTT
EY900964       --> TTCAGAAGCTGACGAATGTATTGAAACAGATGGATGCAACTGATCCTTTT
FD559916       --> TTCAGAAGCTGACGAATGTATTGAAACAGATGGATGCAACTGATCCTTTT
EY939888       --> TTCAGAAGCTGACGAATGTATTGAAACAGATGGATGCAACTGATCCTTTT
FD572429       --> ..................................................
FD948625       --> TTCAGAAGCTGACGAATGTATTGAAACAGATGGATGCAACTGATCCTTTT
FD949970       --> TTCAGAAGCTGACGAATGTATTGAAACAGATGGATGCAACTGATCCTTTT
FD943409       --> ..................................................

               287    -    337
UN26249        --> CGTATTCAGATGACTGATAACCTTCTCGAGAAGCTATACAACATGGGCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD983309       <-- CGTATTCAGATGACTGATAACCTTCTCGAGAAGCTATACAACATGGGCGT  Raphanus raphanistrum subsp. landra
EY935740       <-- CGTATTCAGATGACTGATAACCTTCTCGAGAAGCTATACAACATGGGCGT  Raphanus sativus cv Early Scarlet Globe
FD985553       <-- CGTATTCAGATGACTGATAACCTTCTCGAGAAGCTATACAACATGGGCGT  Raphanus raphanistrum subsp. landra
EY894424       <-- CGTATTCAGATGACTGATAACCTTCTGGAGAAGCTATACAACATGGGCGT  Raphanus raphanistrum subsp. maritimus
FD576073       <-- CGTATTCAGATGACTGATAACCTTCTCGAGAAGCTATACAACATGGGCGT  Raphanus sativus cv Early Scarlet Globe
EY896385       <-- CGTATTCAGATGACTGATAACCTTCTGGAGAAGCTATACAACATGGGCGT  Raphanus raphanistrum subsp. maritimus
FD944383       <-- CGTATTCAGATGACTGATAACCTTCTCGAGAAGCTATACAACATGGGCGT  Raphanus sativus cv Early Scarlet Globe
FD555552       <-- CGTATTCAGATGACTGATAACCTTCTCGAGAAGCTATACAACATGGGCGT  Raphanus raphanistrum subsp. landra
EX753736       <-- CGTATTCAGATGACTGATAACCTTCTGGAGGAGCTATACAACATGGGCGT  Raphanus raphanistrum subsp. maritimus
FD947465       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV526240       --> CGTATTCAGATGACTGATAACCTTCTGGAGAAGCTATACAACATGGGCGT  Raphanus raphanistrum subsp. maritimus
EY898059       --> CGTATTCAGATGACTGATAACCTTCTGGAGAAGCTATACAACATGGGCGT  Raphanus raphanistrum subsp. maritimus
EY898342       --> CGTATTCAGATGACTGATAACCTTCTGGAGAAGCTATACAACATGGGCGT  Raphanus raphanistrum subsp. maritimus
FD560131       --> CGTATTCAGATGACTGATAACCTTCTCGAGAAGCTATACAACATGGGCGT  Raphanus raphanistrum subsp. landra
EY898753       --> CGTATCCAGATGACTGATAACCTTCTGGAGAAGCTATACAACATGGGCGT  Raphanus raphanistrum subsp. maritimus
FD987223       --> CGTATTCAGATGACTGATAACCTTCTCGAGAAGCTATACAACATGGGCGT  Raphanus raphanistrum subsp. landra
EX750214       --> CGTATTCAGATGACTGATAACCTTCTGGAGGAGCTATACAACATGGGCGT  Raphanus raphanistrum subsp. maritimus
EY900239       --> CGTATTCAGATGACTGATAACCTTCTGGAGAAGCTATACAACATGGGCGT  Raphanus raphanistrum subsp. maritimus
EY900964       --> CGTATTCAGATGACTGATAACCTTCTGGAGAAGCTATACAACATGGGCGT  Raphanus raphanistrum subsp. maritimus
FD559916       --> CGTATTCAGATGACTGATAACCTTCTCGAGAAGCTATACAACATGGGCGT  Raphanus raphanistrum subsp. landra
EY939888       --> CGTATTCAGATGACTGATAACCTTCTCGAGAAGCTATACAACATGGGCGT  Raphanus sativus cv Early Scarlet Globe
FD572429       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD948625       --> CGTATTCAGATGACTGATAACCTTCTCGAGAAGCTATACAACATGGGCGT  Raphanus sativus cv Early Scarlet Globe
FD949970       --> CGTATTCAGATGACTGATAACCTTCTCGAGAAGCTATACAACATGGGCGT  Raphanus sativus cv Early Scarlet Globe
FD943409       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               337    -    387
UN26249        --> TATACCAACTAGGAAAAGCTTGGCTTTAACTGATCGGTTATCAGTTTCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD983309       <-- TATACCAACTAGGAAAAGCTTGGCTTTAACTGATCGGTTATCAGTTTCCT
EY935740       <-- TATACCAACTAGGAAAAGCTTGGCTTTAACTGATCGGTTATCAGTTTCCT
FD985553       <-- TATACCAACTAGGAAAAGCTTGGCTTTAACTGATCGGTTATCAGTTTCCT
EY894424       <-- TATACCAACTAGGAAAAGCTTGGCTTTAACTGATCGGTTATCAGTTTCCT
FD576073       <-- TATACCAACTAGGAAAAGCTTGGCTTTAACTGATCGGTTATCAGTTTCCT
EY896385       <-- TATACCAACTAGGAAAAGCTTGGCTTTAACTGATCGGTTATCAGTTTCCT
FD944383       <-- TATACCAACTAGGAAAAGCTTGGCTTTAACTGATCGGTTATCAGTTTCCT
FD555552       <-- TATACCAACTAGGAAAAGCTTGGCTTTAACTGATCGGTTATCAGTTTCCT
EX753736       <-- TATACCAACTAGGAAAAGCTTGGCTTTAACTGATCGGTTATCAGTTTCCT
FD947465       <-- ..................................................
EV526240       --> TATACCAACTAGGAAAAGCTTGGCTTTAACTGATCGGTTATCAGTTTCCT
EY898059       --> TATACCAACTAGGAAAAGCTTGGCTTTAACTGATCGGTTATCAGTTTCCT
EY898342       --> TATACCAACTAGGAAAAGCTTGGCTTTAACTGATCGGTTATCAGTTTCCT
FD560131       --> TATACCAACTAGGAAAAGCTTGGCTTTAACTGATCGGTTATCAGTTTCCT
EY898753       --> TATACCAACTAGGAAAAGCTTGGCTTTAACTGATCGGTTATCAGTTTCCT
FD987223       --> TATACCAACTAGGAAAAGCTTGGCTTTAACTGATCGGTTATCAGTTTCCT
EX750214       --> TATACCAACTAGGAAAAGCTTGGCTTTAACTGATCGGTTATCAGTTTCCT
EY900239       --> TATACCAACTAGGAAAAGCTTGGCTTTAACTGATCGGTTATCAGTTTCCT
EY900964       --> TATACCAACTAGGAAAAGCTTGGCTTTAACTGATCGGTTATCAGTTTCCT
FD559916       --> TATACCAACTAGGAAAAGCTTGGCTTTAACTGATCGGTTATCAGTTTCCT
EY939888       --> TATACCAACTAGGAAAAGCTTGGCTTTAACTGATCGGTTATCAGTTTCCT
FD572429       --> ..................................................
FD948625       --> TATACCAACTAGGAAAAGCTTGGCTTTAACTGATCGGTTATCAGTTTCCT
FD949970       --> TATACCAACTAGGAAAAGCTTGGCTTTAACTGATCGGTTATCAGTTTCCT
FD943409       --> ..................................................

               387    -    437
UN26249        --> CCTTCTGTAGGCGTAGGTTATCAACTGTGCTGGTTCACCTCAAGTACGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD983309       <-- CCTTCTGTAGGCGTAGGTTATCAACTGTGCTGGTTCACCTCAAGTACGCA
EY935740       <-- CCTTCTGTAGGCGTAGGTTATCAACTGTGCTGGTTCACCTCAAGTACGCA
FD985553       <-- CCTTCTGTAGGCGTAGGTTATCAACTGTACTGGTTCACCTCAAGTACGCA
EY894424       <-- CCTTCTGTAGGCGTAGGTTATCAACTGTGCTGGTTCACCTCAAGTACGCA
FD576073       <-- CCTTCTGTAGGCGTAGGTTATCAACTGTGCTGGTTCACCTCAAGTACGCA
EY896385       <-- CCTTCTGTAGGCGTAGGTTATCAACTGTGCTGGTTCACCTCAAGTACGCA
FD944383       <-- CCTTCTGTAGGCGTAGGTTATCAACTGTGCTGGTTCACCTCAAGTACGCA
FD555552       <-- CCTTCTGTAGGCGTAGGTTATCAACTGTGCTGGTTCACCTCAAGTACGCA
EX753736       <-- CCTTCTGTAGGCGTATGTTATCAACTGTGCTGGTTCACCTCAAGTACGCA
FD947465       <-- ..................................................
EV526240       --> CCTTCTGTAGGCGTAGGTTATCAACTGTGCTGGTTCACCTCAAGTACGCA
EY898059       --> CCTTCTGTAGGCGTAGGTTATCAACTGTGCTGGTTCACCTCAAGTACGCA
EY898342       --> CCTTCTGTAGGCGTAGGTTATCAACTGTGCTGGTTCACCTCAAGTACGCA
FD560131       --> CCTTCTGTAGGCGTAGGTTATCAACTGTGCTGGTTCACCTCAAGTACGCA
EY898753       --> CCTTCTGTAGGCGCAGGTTATCAACTGTGCTGGTTCACCTCAAGTACGCA
FD987223       --> CCTTCTGTAGGCGTAGGTTATCAACTGTGCTGGTTCACCTCAAGTACGCA
EX750214       --> CCTTCTGTAGGCGTATGTTATCAACTGTGCTGGTTCACCTCAAGTACGCA
EY900239       --> CCTTCTGTAGGCGTAGGTTATCAACTGTGCTGGTTCACCTCAAGTACGCA
EY900964       --> CCTTCTGTAGGCGTAGGTTATCAACTGTGCTGGTTCACCTCAAGTACGCA
FD559916       --> CCTTCTGTAGGCGTAGGTTATCAACTGTGCTGGTTCACCTCAAGTACGCA
EY939888       --> CCTTCTGTAGGCGTAGGTTATCAACTGTGCTGGTTCACCTCAAGTACGCA
FD572429       --> ..................................................
FD948625       --> CCTTCTGTAGGCGTAGGTTATCAACTGTGCTGGTTCACCTCAAGTACGCA
FD949970       --> CCTTCTGTAGGCGTAGGTTATCAACTGTGCTGGTTCACCTCAAGTACGCA
FD943409       --> ..................................................

               437    -    487
UN26249        --> GAGCACTTGAAAGAAGCTGTGACATACATAGAGCAAGGACACATTCGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD983309       <-- GAGCACTTGAAAGAAGCTGTGACATACATAGAGCAAGGTCACATTCGTGT  Raphanus raphanistrum subsp. landra
EY935740       <-- GAGCACTTGAAAGAAGCTGTGACATACATAGAGCAAGGACACATTCGTGT  Raphanus sativus cv Early Scarlet Globe
FD985553       <-- GAGCACTTGAAAGAAGCTGTGACATACATAGAGCAAGGTCACATTCGTGT  Raphanus raphanistrum subsp. landra
EY894424       <-- GAGCACTTGAAAGAAGCTGTGACATACATAGAGCAAGGACACATTCGTGT  Raphanus raphanistrum subsp. maritimus
FD576073       <-- GAGCACTTGAAAGAAGCTGTGACATACATAGAGCAAGGACACATTCGTGT  Raphanus sativus cv Early Scarlet Globe
EY896385       <-- GAGCACTTGAAAGAAGCTGTGACATACATAGAGTAAGGACACATTCGTGT  Raphanus raphanistrum subsp. maritimus
FD944383       <-- GAGCACTTGAAAGAAGCTGTGACATACATAGAGCAAGGACACATTCGTGT  Raphanus sativus cv Early Scarlet Globe
FD555552       <-- GAGCACTTGAAAGAAGCTGTGACATACATAGAGCAAGGTCACATTCGTGT  Raphanus raphanistrum subsp. landra
EX753736       <-- GAGCACTTGAAAGAAGCTGTGACATACATAGAGCAAGGACACATTCGTGT  Raphanus raphanistrum subsp. maritimus
FD947465       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV526240       --> GAGCACTTGAAAGAAGCTGTGACATACATAGAGCAAGGACACATTCGTGT  Raphanus raphanistrum subsp. maritimus
EY898059       --> GAGCACTTGAAAGAAGCTGTGACATACATAGAGTAAGGACACATTCGTGT  Raphanus raphanistrum subsp. maritimus
EY898342       --> GAGCACTTGAAAGAAGCTGTGACATACATAGAGCAAGGACACATTCGTG.  Raphanus raphanistrum subsp. maritimus
FD560131       --> GAGCACTTGAAAGAAGCTGTGACATACATAGAGCAAGGTCACATTCGTGT  Raphanus raphanistrum subsp. landra
EY898753       --> GAGCACTTGAAAGAAGCTGTGACATACATAGAGTAAGGACACATTCGTGT  Raphanus raphanistrum subsp. maritimus
FD987223       --> GAGCACTTGAAAGAAGCTGTGACATACATAGAGCAAGGTCACATTCGTGT  Raphanus raphanistrum subsp. landra
EX750214       --> GAGCACTTGAAAGAAGCTGTGACATACATAGAGCAAGGACACATTCGTGT  Raphanus raphanistrum subsp. maritimus
EY900239       --> GAGCACTTGAAAGAAGCTGTGACATACATAGAGCAAGGACACATTCGTGT  Raphanus raphanistrum subsp. maritimus
EY900964       --> GAGCACTTGAAAGAAGCTGTGACATACATAGAGTAAGGACACATTCGTGT  Raphanus raphanistrum subsp. maritimus
FD559916       --> GAGCACTTGAAAGAAGCTGTGACATACATAGAGCAAGGTCACATTCGTGT  Raphanus raphanistrum subsp. landra
EY939888       --> GAGCACTTGAAAGAAGCTGTGACATACATAGAGCAAGGACACATTCGTGT  Raphanus sativus cv Early Scarlet Globe
FD572429       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD948625       --> GAGCACTTGAAAGAAGCTGTGACATACATAGAGCAAGGACACATTCGTGT  Raphanus sativus cv Early Scarlet Globe
FD949970       --> GAGCACTTGAAAGAAGCTGTGACATACATAGAGCAAGGACACATTCGTGT  Raphanus sativus cv Early Scarlet Globe
FD943409       --> ..................................................  Raphanus sativus cv Early Scarlet Globe

               487    -    537
UN26249        --> AGGACCAGACACTATCACTGATCCAGCCTTCTTAGTAACTCGGAACATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD983309       <-- AGGACCAGACACTATCACTGATCCAGCCTTCTTAGTAACTCGGAACATGG
EY935740       <-- AGGACCATACACTATCACTGATCCAGCCTTCTTAGTAACTCGGAACATGG
FD985553       <-- AGGACCAGACACTATCACTGATCCAGCCTTCTTAGTAACTCGGAACATGG
EY894424       <-- AGGACCAGACACTATCACTGATCCAGCCTTCTTAGTAACTCGGAACATGG
FD576073       <-- AGGACCAGACACTATCACTGATCCAGCCTTCTTAGTAACTCGGAACATGG
EY896385       <-- AGGACCAGACACTATCACTGATCCAGCCTTCTTAGTAACTCGGAACATGG
FD944383       <-- AGGACCAGACACTATCACTGATCCAGCCTTTTTAGTAACTCGGAACATGG
FD555552       <-- AGGACCAGACACTATCACTGATCCAGCCTTTTTAGTAACTCGGAACATGG
EX753736       <-- AGGACCAGACACTATCACTGATCCAGCCTTCTTAGTAACTCGGAACATGG
FD947465       <-- ..................................................
EV526240       --> AGGACCAGACACTATCACTGATCCAGCCTTCTTAGTAACTCGGAACATGG
EY898059       --> AGGACCAGACACTATCACTGATCCAGCCTTCTTAGTAACTCGGAACATGG
EY898342       --> ..................................................
FD560131       --> AGGACCAGACACTATCACTGATCCAGCCTTCTTAGTAACTCGGAACATGG
EY898753       --> AGGACCAGACACTATCACTGATCCAGCCTTCTTAGTAACTCGGAACATGG
FD987223       --> AGGACCAGACACTATCACTGATCCAGCCTTCTTAGTAACTCGGAACATGG
EX750214       --> AGGACCAGACACTATCACTGATCCAGCCTTCTTAGTAACTCGGAACATGG
EY900239       --> AGGACCAGACACTATCACTTATCCAGCCTTCTTAGTAACACGGAACATGG
EY900964       --> AGGACCAGACACTATCACTGATCCAGCCTTCTTAGTAACTCGGAACATGG
FD559916       --> AGGACCAGACACTATCACTGATCCAGCCTTCTTAGTAACTCGGAACATGG
EY939888       --> AGGACCATACACTATCACTGATCCAGCCTTCTTAGTAACTCGGAACATGG
FD572429       --> ..................................................
FD948625       --> AGGACCAGACACTATCACTGATCCAGCCTTCTTAGTAACTCGGAACATGG
FD949970       --> AGGACCAGACACTATCACTGATCCAGCCTTCTTAGTAACTCGGAACATGG
FD943409       --> ..................................................

               537    -    587
UN26249        --> AAGATTTCATCACTTGGGTTGATTCTTCCAAGATCAAACGCAAGGTGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD983309       <-- AAGATTTCATCACTTGGGTTGATTCTTCCAAGATCAAACGCAAGGTGCTT
EY935740       <-- AAGATTTCATCACTTGGGTTGATTCTTCCAAGATCAAACGCAAGGTGCTT
FD985553       <-- AAGATTTCATCACTTGGGTTGATTCTTCCAAGATCAAACGCAAGGTGCTT
EY894424       <-- AAGATTTCATCACTTGGGTTGATTCTTCCAAGATCAAACGCAAGGTGCTT
FD576073       <-- AAGATTTCATCACTTGGGTTGATTCTTCCAAGATCAAACGCAAGGTGCTT
EY896385       <-- AAGATTTCATCACTTGGGTTGATTCTTCCAAGATCAAACGCAAGGTGCTT
FD944383       <-- AAGATTTCATCACTTGGGTTGATTCTTCCAAGATCAAACGCAAGGTGCTT
FD555552       <-- AAGATTTCATCACTTGGGTTGATTCTTCCAAGATCAAACGCAAGGTGCTT
EX753736       <-- AAGATTTCATCACTTGGGTTGATTCTTCCAAGATCAAACGCAAGGTGCTT
FD947465       <-- ..................................................
EV526240       --> AAGATTTCATCACTTGGGTTGATTCTTCCAAGATCAAACGCAAGGTGCTT
EY898059       --> AAGATTTCATCACTTGGGTTGATTCTTCCAAGATCAAACGCAAGGTGCTT
EY898342       --> ..................................................
FD560131       --> AAGATTTCATCACTTGGGTTGATTCTTCCAAGATCAAACGCAAGGTGCTT
EY898753       --> AAGATTTCATCACTTGGGTTGATTCTTCCAAGATCAAACGCAAGGTGCTT
FD987223       --> AAGATTTCATCACTTGGGTTGATTCTTCCAAGATCAAACGCAAGGTGCTT
EX750214       --> AAGATTTCATCACTTGGGTTGATTCTTCCAAGATCAAACGCAAGGTGCTT
EY900239       --> AAGATTTCATCACTTGGGTTGATTCTTCCAAGATCAAACGCAAGGTGCTT
EY900964       --> AAGATTTCATCACTTGGGTTGATTCTTCCAAGATCAAACGCAAGGTGCTT
FD559916       --> AAGATTTCATCACTTGGGTTGATTCTTCCAAGATCAAACGC.........
EY939888       --> AAGATTTCATCACTTGGGTTGATTCTTCCAAGATCAAACGCAAGGTGCTT
FD572429       --> ..................................................
FD948625       --> AAGATTTCATCACTTGGGTTGATTCTTCCAAGATCAAACGCAAGGTGCTT
FD949970       --> AAGATTTCATCACTTGGGTTGATTCTTCCAAGGTCAAACGCAAGGTGCTT
FD943409       --> ..................................................

               587    -    637
UN26249        --> CAGTACAATGACAAGTTGGATGATTACGACATGATGCTTGCTTAACTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD983309       <-- CAGTACAATGACAAGTTGGATGATTACGACATGATGCTTGCTTAACTCTC
EY935740       <-- CAGTACAATGACAAGTTGGATGATTACGACATGATGCTTGCTTAACTCTC
FD985553       <-- CAGTACAATGACAAGTTGGATGATTACGACATGATGTTTGCTTAACTCTC
EY894424       <-- CAGTACAATGACAAGTTGGATAATTACGACATGATGCTTGCTTAACTCTC
FD576073       <-- CAGTACAATGACAAGTTGGATGATTACGACATGATGCTTGCTTAACTCTC
EY896385       <-- CAGTACAATGACAAGTTGGATGATTACGACATGATGCTTGCTTAACTCTC
FD944383       <-- CAGTACAATGACAAGTTGGATGATTACGACATGATGCTTGCTTAACTCTC
FD555552       <-- CAGTACAATGACAAGTTGGATGATTACGACATGATGCTTGCTTAACTCTC
EX753736       <-- CAGTACAATGACAAGTTGGATGATTACGACATGATGCTTGCTTAACTCTC
FD947465       <-- ..................................................
EV526240       --> CAGTACAATGACAAGTTGGATGATTACGACATGATGCTTGCTTAACTCTC
EY898059       --> CAGTACAATGACAAGTTGGATGATTACGACATGATGCTTGCTTAACTCTC
EY898342       --> ..................................................
FD560131       --> CAGTACATTGACAAGTTGGATGATTACGACATGATGCTTGCTTAACTCTC
EY898753       --> CAGTACAATGACAAGTTGGATGATTACGACATGATGCTTGCTTAACTCTC
FD987223       --> CAGTACAATGACAAGTTGGATGATTACGACATGATGCTTGCTTAACTCTC
EX750214       --> CAGTACAATGACAAGTTGGATGATTACGACATGATGCTTGCTTAACTCTC
EY900239       --> CAGTACAATGACAAGTTGGATGATTACGACATGATGCTTGCTTAACTCTC
EY900964       --> CAGTACAATGACAAGTTGGATGATTACGACATGATGCTTGCTTAACTCTC
FD559916       --> ..................................................
EY939888       --> CAGTACAATGACAAGTTGGATGATTACGACATGATGCTTGCTTAACTCTC
FD572429       --> ..................................................
FD948625       --> CAGTACAATGACAAGTTGGATGATTACGACATGATGCTTGCTTAACTCTC
FD949970       --> CAGTACAATGACAAGTTGGATGATTACGACATGATGCTTGCTTAACTCTC
FD943409       --> ..................................................

               637    -    687
UN26249        --> TCT--ATTTGTCTTGCTTCTCAAAAGTGTAAACCTTTTTTCTCTATTGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD983309       <-- TCT--ATTTGTCTTGCTTCTCAAAAGTGTAAAC-TTTTTTCTCTATTGCC  Raphanus raphanistrum subsp. landra
EY935740       <-- TCTCTATTTGTCTTGCTTCTCAAAA-AGTAAACCTTTTTTCTCTATTGCC  Raphanus sativus cv Early Scarlet Globe
FD985553       <-- TCT--ATTTGTCTTGCTTCTCAAAAGTGTAAACCTTTTT-CTCTATTGCC  Raphanus raphanistrum subsp. landra
EY894424       <-- TCT--ATTTGTCTTGCTTCTCAAAAGTGTAAACCTTTTTTCTCTATTGCC  Raphanus raphanistrum subsp. maritimus
FD576073       <-- TCTCTATTTGTCTTGCTTCTCAAAA-AGTAAACCTTTTTTCTCTATTGCC  Raphanus sativus cv Early Scarlet Globe
EY896385       <-- TCT--ATTTGTCTTGCTTCTCAAAAGTGTAAACCTTTTTTCTCTATTGCC  Raphanus raphanistrum subsp. maritimus
FD944383       <-- TCTCTATTTGTCTTGCTTCTCAAAA-AGTAAACCTTTTTTCTCTATTGCC  Raphanus sativus cv Early Scarlet Globe
FD555552       <-- TCT--ATTTGTCTTGCTTCTCAAAAGTGTAAACCTTTTT-CTCTATTGCC  Raphanus raphanistrum subsp. landra
EX753736       <-- TCT--ATTTGTCTTGCTTCTCAAAAGTGTAAACCTTTTTTCTCTATTGCC  Raphanus raphanistrum subsp. maritimus
FD947465       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EV526240       --> TCT--ATTTGTCTTGCTTCTCAAAAGTGTAAACCTTTTTTCTCTATTGCC  Raphanus raphanistrum subsp. maritimus
EY898059       --> TCT--ATTTGTCTTGCTTCTCAAAAGTGTAAACCTTTTTTCTCTATTGCC  Raphanus raphanistrum subsp. maritimus
EY898342       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD560131       --> TCT--ATTTGTCTTGCTTCTCAAA-GTGTAAACCTTTTT-CTCTATTGCC  Raphanus raphanistrum subsp. landra
EY898753       --> TCT--ATTTGTCTTGCTTCTCAAGAGTGTAAACCTTTTTTCTCTATTGCC  Raphanus raphanistrum subsp. maritimus
FD987223       --> TCT--ATTTGTCTTGCTTCTCAAAAGTGTAAAC-TTTTTTCTCTATTGCC  Raphanus raphanistrum subsp. landra
EX750214       --> TCT--ATTTGTCTTGCTTCTCAAA-GTGTAAACCTTTTTTCTC.......  Raphanus raphanistrum subsp. maritimus
EY900239       --> TCT--ATTTGTCTTGCTTCTCAAAAGTGTAAACCTTTTT-CTCTATTACC  Raphanus raphanistrum subsp. maritimus
EY900964       --> TCT--ATTTGTCTTGCTTCTCAAA-GTGTAAACCTTTTTTCTCTATTGCC  Raphanus raphanistrum subsp. maritimus
FD559916       --> ..................................................  Raphanus raphanistrum subsp. landra
EY939888       --> TCTCTATTTGTCTTGCTTCTCAAAAGT--AAACCTTTTTTCTCTATTGCC  Raphanus sativus cv Early Scarlet Globe
FD572429       --> ..................................................  Raphanus sativus cv Early Scarlet Globe
FD948625       --> TCTCTATTTGTCTTGCTTCTCAAAAGT--AAACCTTTTTTCTCTATTGCC  Raphanus sativus cv Early Scarlet Globe
FD949970       --> TCTCTATTTGTCTTGCTTCTCAAAA-AGTAAACCTTTTTTCTCTATTGCC  Raphanus sativus cv Early Scarlet Globe
FD943409       --> ...............................................GCC  Raphanus sativus cv Early Scarlet Globe

               687    -    737
UN26249        --> -AAACTATATGTTTTCATTACTTATCAAACCTTTTGCAACAGATTTAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD983309       <-- TAAACTATATGTTTTCATTACTTATCAAACCTTTTc..............
EY935740       <-- -AAACTATATGTTTTCATTACTTATCAACCCTTTTGC.............
FD985553       <-- -AAACTATATGTTTTCATTACTTATCAAACCTTTTGCAACAGATTT....
EY894424       <-- -AAACTATATGTTTTCATTACTTATCAAACCTTTTGCAACAGATTTAAGA
FD576073       <-- -AAACTATATGTTTTCATTACTTATCAAACCTTTTGCAACAGATTTAAGA
EY896385       <-- -AAACTATATGTTTTCATTACTTATCAAACCTTTTGCAACAGATTT....
FD944383       <-- -AAACTATATGTTTTCATTACTTATCAAACCTTTTGCAACAGATTTAAGA
FD555552       <-- -AAACTATATGTTTTCATTACTTATCAAACCTTTTGCAACAGATTTAAGA
EX753736       <-- -AAACTATATGTTTTCATTACTTATCAAACCTTTTGCAACAc........
FD947465       <-- ....................................CAACAGATTTAAGA
EV526240       --> -AAACTATATGTTTTCATTACTTATCAAACCTTTTGCAGCAGATTTAAGA
EY898059       --> -AAACTATATGTTTTCATTACTTATCAAACCTTTTGCAACAGATTTA-GA
EY898342       --> ..................................................
FD560131       --> -AAACTATATGTTT....................................
EY898753       --> -AAACTATATGTTTTCATTACTTATCAAACCTTTTGCA-CAGATTTA-GA
FD987223       --> -AAACTATATGTTTTCATTACTTATC........................
EX750214       --> ..................................................
EY900239       --> -AAACTATATGTTTT...................................
EY900964       --> -AAACTATATGTTTTCATTACTTATCAA-CCTTT-GC-ACAGATTT....
FD559916       --> ..................................................
EY939888       --> -AAACTATATGTTTTCATTACTTATCAAACCTTTgc..............
FD572429       --> ..................................................
FD948625       --> -AAACTATATGTTTTCATTACTTATCAAACCTTTTGCA-CAGATTTAAGA
FD949970       --> -AAACTATATGTTTTCATTACTTATCAAACCTTTTG..............
FD943409       --> -AAACTATATGTTTTCATTACTTATCAAACCTTTTGCAACAGATTTAAGA

               737    -    787
UN26249        --> CCAAAGCTTATATTAGGACTAAAAAAAAAAACAAGAATTCAATCAAAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD983309       <-- ..................................................
EY935740       <-- ..................................................
FD985553       <-- ..................................................
EY894424       <-- CCAAAGCTTtttt.....................................
FD576073       <-- CCAAAGCTTATATTAGGACT..............................
EY896385       <-- ..................................................
FD944383       <-- CC................................................
FD555552       <-- CC................................................
EX753736       <-- ..................................................
FD947465       <-- CCAAAGCTTATATTAGGACTAAAAAAAAAAACAAGAATTCAATCAAAAGT
EV526240       --> CCAAAGCTTtttt.....................................
EY898059       --> CCAAAGCTTttt......................................
EY898342       --> ..................................................
FD560131       --> ..................................................
EY898753       --> CCAAA.............................................
FD987223       --> ..................................................
EX750214       --> ..................................................
EY900239       --> ..................................................
EY900964       --> ..................................................
FD559916       --> ..................................................
EY939888       --> ..................................................
FD572429       --> ..................................................
FD948625       --> CAAAAaaaa.........................................
FD949970       --> ..................................................
FD943409       --> CCAAAGCTTATATTAGGACTAAAAAAAAAAACAAGAATTCAATCAAAAGT

               787    -    837
UN26249        --> ACTTTGACATCTGAATCCCTTTATTAACCAACCCACATTTCTCATAGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD983309       <-- ..................................................
EY935740       <-- ..................................................
FD985553       <-- ..................................................
EY894424       <-- ..................................................
FD576073       <-- ..................................................
EY896385       <-- ..................................................
FD944383       <-- ..................................................
FD555552       <-- ..................................................
EX753736       <-- ..................................................
FD947465       <-- ACTTTGACATCTGAATCCCTTTATTAACCAACCCACATTTCTCATAGAAC
EV526240       --> ..................................................
EY898059       --> ..................................................
EY898342       --> ..................................................
FD560131       --> ..................................................
EY898753       --> ..................................................
FD987223       --> ..................................................
EX750214       --> ..................................................
EY900239       --> ..................................................
EY900964       --> ..................................................
FD559916       --> ..................................................
EY939888       --> ..................................................
FD572429       --> ..................................................
FD948625       --> ..................................................
FD949970       --> ..................................................
FD943409       --> ACTTTGACATCTGAATCCCTTTATTAACCAACCCACATTTCTCATAAAAC

               837    -    887
UN26249        --> ACTTTCTTCTCCACGCTACAATCAAGAATCACCTTGTAGCAACCCATGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD983309       <-- ..................................................
EY935740       <-- ..................................................
FD985553       <-- ..................................................
EY894424       <-- ..................................................
FD576073       <-- ..................................................
EY896385       <-- ..................................................
FD944383       <-- ..................................................
FD555552       <-- ..................................................
EX753736       <-- ..................................................
FD947465       <-- ACTTTCTTCTCCACGCTACAATCAAGAATCACCTTGTAGCAACCCATGTC
EV526240       --> ..................................................
EY898059       --> ..................................................
EY898342       --> ..................................................
FD560131       --> ..................................................
EY898753       --> ..................................................
FD987223       --> ..................................................
EX750214       --> ..................................................
EY900239       --> ..................................................
EY900964       --> ..................................................
FD559916       --> ..................................................
EY939888       --> ..................................................
FD572429       --> ..................................................
FD948625       --> ..................................................
FD949970       --> ..................................................
FD943409       --> ACTTTCTTCTCCACGCTACAATCAAGAATCACCTTGTAGCAACCCATGTC

               887    -    937
UN26249        --> TCGACAATGATCCGATAGAAACTCAACCACTTGCTTCCCGAGACGTTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD983309       <-- ..................................................
EY935740       <-- ..................................................
FD985553       <-- ..................................................
EY894424       <-- ..................................................
FD576073       <-- ..................................................
EY896385       <-- ..................................................
FD944383       <-- ..................................................
FD555552       <-- ..................................................
EX753736       <-- ..................................................
FD947465       <-- TCGACAATGATCCGATAGAAACTCAACCACTTGCTTCCCGAGACGTTTCC
EV526240       --> ..................................................
EY898059       --> ..................................................
EY898342       --> ..................................................
FD560131       --> ..................................................
EY898753       --> ..................................................
FD987223       --> ..................................................
EX750214       --> ..................................................
EY900239       --> ..................................................
EY900964       --> ..................................................
FD559916       --> ..................................................
EY939888       --> ..................................................
FD572429       --> ..................................................
FD948625       --> ..................................................
FD949970       --> ..................................................
FD943409       --> TCGACAATGATCCGATAGAAACTCAACCACTTGCTTCCCGAGACGTTTCC

               937    -    987
UN26249        --> CGCGAAACTCCGAGTCCACGACGACGTCCTCGATGTGCCCAACTTTGCCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD983309       <-- ..................................................
EY935740       <-- ..................................................
FD985553       <-- ..................................................
EY894424       <-- ..................................................
FD576073       <-- ..................................................
EY896385       <-- ..................................................
FD944383       <-- ..................................................
FD555552       <-- ..................................................
EX753736       <-- ..................................................
FD947465       <-- CGCGAAACTCCGAGTCCACGACGACGTCCTCGATGTGCCCAACTTTGCCG
EV526240       --> ..................................................
EY898059       --> ..................................................
EY898342       --> ..................................................
FD560131       --> ..................................................
EY898753       --> ..................................................
FD987223       --> ..................................................
EX750214       --> ..................................................
EY900239       --> ..................................................
EY900964       --> ..................................................
FD559916       --> ..................................................
EY939888       --> ..................................................
FD572429       --> ..................................................
FD948625       --> ..................................................
FD949970       --> ..................................................
FD943409       --> CGCGAAACTCCGAGTCCACGACGACGTCCTCGATGTGCCCAACTTTGCCG

               987    -   1037
UN26249        --> CAGTTTCTCAAAAACTTCTTCTCTATCATCACGCTCCCCGTCGCCGCGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD983309       <-- ..................................................
EY935740       <-- ..................................................
FD985553       <-- ..................................................
EY894424       <-- ..................................................
FD576073       <-- ..................................................
EY896385       <-- ..................................................
FD944383       <-- ..................................................
FD555552       <-- ..................................................
EX753736       <-- ..................................................
FD947465       <-- CAGTTTCTCAAAAACTTCTTCTCTATCATCACGCTCCCCGTCGCCGCGAT
EV526240       --> ..................................................
EY898059       --> ..................................................
EY898342       --> ..................................................
FD560131       --> ..................................................
EY898753       --> ..................................................
FD987223       --> ..................................................
EX750214       --> ..................................................
EY900239       --> ..................................................
EY900964       --> ..................................................
FD559916       --> ..................................................
EY939888       --> ..................................................
FD572429       --> ..................................................
FD948625       --> ..................................................
FD949970       --> ..................................................
FD943409       --> CAGTTTCTCAAAAACTTCTTCTCTATCATCACGCTCCCCGTCGCCGCGAT

               1037   -   1087
UN26249        --> TCTCCGGGAAGACTCGTCTTCGATCACGCAGATCAGATGGTCGTCTCCGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD983309       <-- ..................................................
EY935740       <-- ..................................................
FD985553       <-- ..................................................
EY894424       <-- ..................................................
FD576073       <-- ..................................................
EY896385       <-- ..................................................
FD944383       <-- ..................................................
FD555552       <-- ..................................................
EX753736       <-- ..................................................
FD947465       <-- TCTCCGGGAAGACTCGTCTTCGATCACGCAGATCAGATGGTCGTCTCCGC
EV526240       --> ..................................................
EY898059       --> ..................................................
EY898342       --> ..................................................
FD560131       --> ..................................................
EY898753       --> ..................................................
FD987223       --> ..................................................
EX750214       --> ..................................................
EY900239       --> ..................................................
EY900964       --> ..................................................
FD559916       --> ..................................................
EY939888       --> ..................................................
FD572429       --> ..................................................
FD948625       --> ..................................................
FD949970       --> ..................................................
FD943409       --> TCTCCGGGAAGACTCGTCTTCGATCACGC.....................

               1087   -   1137
UN26249        --> GGGAGCTGATCTCCTCGAAACGCTGATCGAATTCATCGTCGGTTACTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD983309       <-- ..................................................
EY935740       <-- ..................................................
FD985553       <-- ..................................................
EY894424       <-- ..................................................
FD576073       <-- ..................................................
EY896385       <-- ..................................................
FD944383       <-- ..................................................
FD555552       <-- ..................................................
EX753736       <-- ..................................................
FD947465       <-- GGGAGCTGATCTCCTCGAAACGCTGATCGAATTCATCGTCGGTTACTGAT
EV526240       --> ..................................................
EY898059       --> ..................................................
EY898342       --> ..................................................
FD560131       --> ..................................................
EY898753       --> ..................................................
FD987223       --> ..................................................
EX750214       --> ..................................................
EY900239       --> ..................................................
EY900964       --> ..................................................
FD559916       --> ..................................................
EY939888       --> ..................................................
FD572429       --> ..................................................
FD948625       --> ..................................................
FD949970       --> ..................................................
FD943409       --> ..................................................

               1137   -   1187
UN26249        --> CCGGTGACGGTGAGTTGACCGAGAAGCTCCATGTATCCCTTTCTCCTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD983309       <-- ..................................................
EY935740       <-- ..................................................
FD985553       <-- ..................................................
EY894424       <-- ..................................................
FD576073       <-- ..................................................
EY896385       <-- ..................................................
FD944383       <-- ..................................................
FD555552       <-- ..................................................
EX753736       <-- ..................................................
FD947465       <-- CCGGTGACGGTGAGTTGACCGAGAAGCTCCATGTATCCCTTTCTCCTGTC
EV526240       --> ..................................................
EY898059       --> ..................................................
EY898342       --> ..................................................
FD560131       --> ..................................................
EY898753       --> ..................................................
FD987223       --> ..................................................
EX750214       --> ..................................................
EY900239       --> ..................................................
EY900964       --> ..................................................
FD559916       --> ..................................................
EY939888       --> ..................................................
FD572429       --> ..................................................
FD948625       --> ..................................................
FD949970       --> ..................................................
FD943409       --> ..................................................

               1187   -   1237
UN26249        --> GGTGATCTCCAGTCTTCGGATCTTGAGTGTCTGTTTCTCTCCGCTGTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD983309       <-- ..................................................
EY935740       <-- ..................................................
FD985553       <-- ..................................................
EY894424       <-- ..................................................
FD576073       <-- ..................................................
EY896385       <-- ..................................................
FD944383       <-- ..................................................
FD555552       <-- ..................................................
EX753736       <-- ..................................................
FD947465       <-- GGTGATCTCCAGTCTTCGGATCTTGAGTGTCTGTTTCTCTCCGCTGTTGT
EV526240       --> ..................................................
EY898059       --> ..................................................
EY898342       --> ..................................................
FD560131       --> ..................................................
EY898753       --> ..................................................
FD987223       --> ..................................................
EX750214       --> ..................................................
EY900239       --> ..................................................
EY900964       --> ..................................................
FD559916       --> ..................................................
EY939888       --> ..................................................
FD572429       --> ..................................................
FD948625       --> ..................................................
FD949970       --> ..................................................
FD943409       --> ..................................................

               1237   -   1287
UN26249        --> CGGAATTAGACGCGTCCGCCATTGGAGGTCGAAGAGCAAGAAGAACTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD983309       <-- ..................................................
EY935740       <-- ..................................................
FD985553       <-- ..................................................
EY894424       <-- ..................................................
FD576073       <-- ..................................................
EY896385       <-- ..................................................
FD944383       <-- ..................................................
FD555552       <-- ..................................................
EX753736       <-- ..................................................
FD947465       <-- CGGAATTAGACGCGTCCGCCATTGGAGGTCGAAGAGCAAGAAGAACTGAG
EV526240       --> ..................................................
EY898059       --> ..................................................
EY898342       --> ..................................................
FD560131       --> ..................................................
EY898753       --> ..................................................
FD987223       --> ..................................................
EX750214       --> ..................................................
EY900239       --> ..................................................
EY900964       --> ..................................................
FD559916       --> ..................................................
EY939888       --> ..................................................
FD572429       --> ..................................................
FD948625       --> ..................................................
FD949970       --> ..................................................
FD943409       --> ..................................................

               1287   -   1337
UN26249        --> TTCCC
                   ~~~~~
FD983309       <-- .....
EY935740       <-- .....
FD985553       <-- .....
EY894424       <-- .....
FD576073       <-- .....
EY896385       <-- .....
FD944383       <-- .....
FD555552       <-- .....
EX753736       <-- .....
FD947465       <-- TTCCC
EV526240       --> .....
EY898059       --> .....
EY898342       --> .....
FD560131       --> .....
EY898753       --> .....
FD987223       --> .....
EX750214       --> .....
EY900239       --> .....
EY900964       --> .....
FD559916       --> .....
EY939888       --> .....
FD572429       --> .....
FD948625       --> .....
FD949970       --> .....
FD943409       --> .....