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Alignment for radish unigene UN26295

               1      -     51
UN26295        --> ATAAAATCGGTAATACATGATTAGAAAGGTGATAAAGTGGAAATGATTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941633       <-- ATAAAATCGGTAATACATGATTAGAAAGGTGATAAAGTGGAAATGATTAT
EX905392       <-- ..AAAATCGGTAATACATGATTAGAAAGGTGATAAAGTGGAAATGATTAT
FD534973       <-- ..................................AAGTGGAAATGATTAT
EV551355       <-- ..................................................
EY938507       <-- ..................................................
FD937234       --> ATAAAATCGGTAATACATGATTAGAAAGGTGATAAAGTGGAAATGATTAT
EX909105       --> ..AAAATCGGTAATACATGATTAGAAAGGTGATAAAGTGGAAATGATTAT
EY934627       --> .................................AAAGTGGAAATGATTAT
EW730964       --> ..................................AAGTGGAAATGATTAT
FD548143       --> ....................................gcGGAAATGATTAT

               51     -    101
UN26295        --> TTATTATTCATGTTTTTAAAATAATTGCATCAGTTATGCATCATATTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941633       <-- TTATTATTCATGTTTTTAAAATAATTGCATCAGTTATGCATCATATTAAA
EX905392       <-- TTATTATTCACGTTTTTAAAATAATTGCATCAGTTATGCATCATATTAAA
FD534973       <-- TTATTATTCATGTTTTTAAAATAATTGCATCAGTTATGCATCATATTAAA
EV551355       <-- ..................................................
EY938507       <-- ..................................................
FD937234       --> TTATTATTCATGTTTTTAAAATAATTGCATCAGTTATGCATCATATTAAA
EX909105       --> TTATTATTCACGTTTTTAAAATAATTGCATCAGTTATGCATCATATTAAA
EY934627       --> TTATTATTCATGTTTTTAAAATAATTGCATCAGTTATGCATCATATTAAA
EW730964       --> TTATTATTCATGTTTTTAAAATAATTGCATCAGTTATGCATCATATTAAA
FD548143       --> TTATTATTCATGTTTTTAAAATAATTGCATCAGTTATGCATCATATTAAA

               101    -    151
UN26295        --> AATTTAAACAACATATTCAAAGAAATATTTTTTTTTGGAATTTTAAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941633       <-- AATTTAAACAACATATTCAAAGAAATATTTTTTTTTGGAATTTTAAAACA  Raphanus sativus var. oleiformis
EX905392       <-- AATTTAAACAACATATTCAAAGAAATATTTTTTTTTGGAATTTTAAAACA  Raphanus sativus cv Rat-Tail Radish #3870
FD534973       <-- AATTTAAACAACATATTCAAAGAAATATTTTTTTT-GGAATTTTTAAACA  Raphanus raphanistrum subsp. maritimus
EV551355       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY938507       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD937234       --> AATTTAAACAACATATTCAAAGAAATATTTTTTTTTGGAATTTTAAAACA  Raphanus sativus var. oleiformis
EX909105       --> AATTTAAACAACATATTCAAAGAAATATTTTTTTTTGGAATTTTAAAACA  Raphanus sativus cv Rat-Tail Radish #3870
EY934627       --> AATTTAAACAACGTATTCAAAGAAATATTTTTTTT-GGAATTTTAAAACA  Raphanus sativus cv Early Scarlet Globe
EW730964       --> AATTTAAACAACATATTCAAAGAAATATTTTTTTT-GGAATTTTAAAACA  Raphanus sativus cv Early Scarlet Globe
FD548143       --> AATTTAAACAACATATTCAAAGAAATATTTTTTTT-GGAATTTTAAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)

               151    -    201
UN26295        --> TCAATACATTTTATTCTTCAGTAGATACTGCAGGACAAGTAGGGTTGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941633       <-- TCAATACATTTTATTCTTCAGTAGATACTGCAGGACAAGTAGGGTTGCAA
EX905392       <-- TCAATACATTTTATTCTTCAGTAGATACTGCAGGACAA--GGGGTTGCAA
FD534973       <-- TCAATACATTTTATTCTTCAGTAGATACTGCAGGACAAGTAGGGTTGCAA
EV551355       <-- ..................................................
EY938507       <-- ..................................................
FD937234       --> TCAATACATTTTATTCTTCAGTAGATACTGCAGGACAAGTAGGGTTGCAA
EX909105       --> TCAATACATTTTATTCTTCAGTAAATACTGCAGGACAAG--GGGTTGCAA
EY934627       --> TCAATACATTTTATTCTTCAGTAGATACTGCAGGACAAGTAGGGTTGCAA
EW730964       --> TCAATACATTTTATTCTTCAGTAAATACTGCAGGACAAGTAGGGTTGCAA
FD548143       --> TCAATACATTTTATTCTTCAGTAGATACTGCAGGACAAGTAGGGTTGCAA

               201    -    251
UN26295        --> TTCAAGGATGGGCAATCTATGTTCTGAAATGTACTCCGCTCATAAAACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941633       <-- TTCAAGGATGGGCAATCTATGTTCTGAAATGTACTCCGCTAATAAAACCA
EX905392       <-- TTCAAGGATGGGCAATCTATGTTCTGAAATGTACTCCGCTCATAAAACCA
FD534973       <-- TTCAAGGATGGGCAATCTATGTTCTGAAATGTACTCCGCTCATAAAACCA
EV551355       <-- ..................................................
EY938507       <-- ..................................................
FD937234       --> TTCAAGGATGGGCAATCTATGTTCTGAAATGTACTCCGCTAATAAAACCA
EX909105       --> TTCAAGGATGGGCAATCTATGTTCTGAAATGTACTCCGCTCATAAAACCA
EY934627       --> TTCAAGGATGGGCAATCTATGTTCTGAAATGTACTCCGCTCATAAAACCA
EW730964       --> TTCAAGGATGGGCAATCTATGTTCTGAAATGTACTCCGCTCATAAAACCA
FD548143       --> TTCAAGGATGGGCAATCTATGTTCTGAAATGTACTCCGCTCATAAAACCA

               251    -    301
UN26295        --> GTCTCCAACTGCTTTTGCCATTTTCGTATTGCCGACTTGTGGGCCTTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941633       <-- GTCTCCAACTGCTTTTGCCATTTTCGTATTGCCGACTTGTGGGCCTTGAG
EX905392       <-- GTCTCCAACCGCTTTTGCCATTTTCGTATTGCCGACTTGTGGGCCTTGAG
FD534973       <-- GTCTCCAACTGCTTTTGCCATTTTCGTATTGCCGACTTGTGGGCCTTGAG
EV551355       <-- ..................................................
EY938507       <-- ..................................................
FD937234       --> GTCTCCAACTGCTTTTGCCATTTTCGTATTGCCGACTTGTGGGCCTTGAG
EX909105       --> GTCTCCAACCGCTTTTGCCATTTTCGTATTGCCGACTTGTGGGCCTTGAG
EY934627       --> GTCTCCAACTGCTTTTGCCATTTTCGTATTGCCGACTTGTGGGCCTTGAG
EW730964       --> GTCTCCAACTGCTTTTGCCATTTTCGTATTGCCGACTTGTGGGCCTTGAG
FD548143       --> GTCTCCAACTGCTTTTGCCATTTTCGTATTGCCGACTTGTGGGCCTTGAG

               301    -    351
UN26295        --> CACCGGACCAAGTGGCTGCACTTCCACCTTGGCAATGAGCGTGGCATGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941633       <-- CACCGGACCAAGTGGCTGCACTTCCACCTTGGCAATGAGCGTGGCATGc.
EX905392       <-- CACCGGACCAAGTGGCTGCACTTCCACCTTGGCAATGAGCGTGGCATGAA
FD534973       <-- CACCGGACCAAGTGGCTGCACTTCCACCTTGGCAATGAGCGTGGCATGAA
EV551355       <-- ..................................................
EY938507       <-- ..................................................
FD937234       --> CACCGGACCAAGTGGCTGCACTTCCACCTTGGCAATGAGCGTGGCATGc.
EX909105       --> CACCGGACCAAGTGGCTGCACTTCCACCTTGGCAATGAGCGTGGCATGAA
EY934627       --> CACCGGACCAAGTGGCTGCACTTCCACCTTGGCAATGAGCGTGGCATGAA
EW730964       --> CACTGGACCAAGTGGCTGCACTTCCACCTTGGCAATGAGCGTGGCATGAA
FD548143       --> CACCGGACCAAGTGGCTGCACTTCCACCTTGGCAATGAGCGTGGCATGAA

               351    -    401
UN26295        --> TCTAGGAATAATCCGCTAGTCGTCGTTGCTTGAACAGGTGCCAACGCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941633       <-- ..................................................
EX905392       <-- TCTAGGAATAATCCGCTAGTCGTCGTTGCTCGAACAGGTGCCAACGCAGC
FD534973       <-- TCTAGTAATAATCCGCc.................................
EV551355       <-- ..................................................
EY938507       <-- ..................................................
FD937234       --> ..................................................
EX909105       --> TCTAGGAATAATCCGCTAGTCGTCGTTGCTCGAACAGGTGCCAACGCAGC
EY934627       --> TCTAGGAATAATCCGCTAGTCGTCGTTGCTTGAACAGGTGCCAACGCAGC
EW730964       --> TCTAGGAATAATCCGCTAGTCGTCGTTGCTTGAGCAGGTGCCAACGCAGC
FD548143       --> TCTAGGAATAATCCGCTGGTCGTCGTTGCTTGAACAGGTGCCAACGCAGC

               401    -    451
UN26295        --> CAACATTTGGTCTCTATACCCTTGAACGGTTTGAAGCTGAGCGGCTGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941633       <-- ..................................................
EX905392       <-- CAACATTTGGTCTCTATACCCTac..........................
FD534973       <-- ..................................................
EV551355       <-- ..................................................
EY938507       <-- ..................................................
FD937234       --> ..................................................
EX909105       --> CAACATTTGGTCTCTATACCCTac..........................
EY934627       --> CAGCATTTGGTCTCTATACCCTTGAACGGTTTGAAGCTGAGCGGC.....
EW730964       --> CAGCATTTGGTCTCTATACCCTTGAACGGTTTGAAGCTGAGCGGCTGTAC
FD548143       --> CAACATTTGGTCTCTATACCCTTGAACGGTTTGAAGCTGAACGGCTGTAC

               451    -    501
UN26295        --> ACTTCTTAAGATCAAGCTTACAATCCTTCCACTCTTTGCGTTTATCAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941633       <-- ..................................................
EX905392       <-- ..................................................
FD534973       <-- ..................................................
EV551355       <-- ..................................................
EY938507       <-- ..................................................
FD937234       --> ..................................................
EX909105       --> ..................................................
EY934627       --> ..................................................
EW730964       --> ACTTCTTAAGATCAAGCTTACAATCCTTCCACTCTTTGCGTTTATCAACA
FD548143       --> ACTTCTTAAGATCAAGCTTACAATCCTTCCACTCTTTGCGTTTATCAACA

               501    -    551
UN26295        --> GAGGTTGGAGCCAAAACATTCTTGATCTGCCAAGAATCGAAGGCGGCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941633       <-- ..................................................
EX905392       <-- ..................................................
FD534973       <-- ..................................................
EV551355       <-- ........................ATCTGCCAAGAATCGAAGGCGGCATT
EY938507       <-- ..................................................
FD937234       --> ..................................................
EX909105       --> ..................................................
EY934627       --> ..................................................
EW730964       --> GAGGTTGGAGCCAAAACATTCTTGATCTGCCAAGAATCGAAGGCGGCATT
FD548143       --> GAGGTTGGAGCCAAAACATTCTTGATCTGCCAAGAATCGAAGGGGGCATT

               551    -    601
UN26295        --> GATTACGAAAAGTGGTGTTTGCATGGTCTTTACAACGTATTGCGGGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941633       <-- ..................................................
EX905392       <-- ..................................................
FD534973       <-- ..................................................
EV551355       <-- GATTACGAAAAGTGGTGTTTGCATGGTCTTTACAAAGTATTGCGGGAAGA
EY938507       <-- ..................................................
FD937234       --> ..................................................
EX909105       --> ..................................................
EY934627       --> ..................................................
EW730964       --> GATTACGAAAAGTGGTGTTTGCATGGTCTTTACAACGTATTGCGGGAAGA
FD548143       --> GATTACGAAAAGTGGTGTTTGCATGGTCTTTACAACGTATTGCGGGAAGA

               601    -    651
UN26295        --> AACACAGTTCTGGCTTCATACTTGAGGTACATGAAGCAGGAAGACTCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941633       <-- ..................................................
EX905392       <-- ..................................................
FD534973       <-- ..................................................
EV551355       <-- AACACAGTTCTGGCTTCATACTTGAGGTACATGAAGCAGGAAGACTCTTT
EY938507       <-- ..CACAGTTCTGGCTTCATACTTGAGGTACATGAAGCAGGAAGACTCTTT
FD937234       --> ..................................................
EX909105       --> ..................................................
EY934627       --> ..................................................
EW730964       --> AACACAGTTCTGGCTTCATACTTGAGGTACATGAAGCAGGAAGACTCTTT
FD548143       --> AACACAGTTCTGGCTTCATACTTGAGGTACATGAAGCAGGAAGACTCTTT

               651    -    701
UN26295        --> GCAGATCCGTGGGTCGCTACAACTTTGCTGTAGTATGATTCTATGTAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941633       <-- ..................................................
EX905392       <-- ..................................................
FD534973       <-- ..................................................
EV551355       <-- GCAGATCCGTGGGTCGCTACAACTTTGCTGTAGTATGATTCTATGTAAGA
EY938507       <-- GCAGATCCGTGGGTCGCTACAACTTTGCTGTAGTATGATTCTATGTAAGA
FD937234       --> ..................................................
EX909105       --> ..................................................
EY934627       --> ..................................................
EW730964       --> GAAGATCCGTGGGTCGCTACAACTTTGCTGTAGTATGATTCTATGTAAGA
FD548143       --> GCAGATCCGTGGGTCGCTACAACTTTGCTGTAGTATGATTCTATGTAAGG

               701    -    751
UN26295        --> TCCTCCACTGATATCCTTACCGTGGATGAAGAAACCGGCGTCGGAAACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941633       <-- ..................................................
EX905392       <-- ..................................................
FD534973       <-- ..................................................
EV551355       <-- TCCTCCACTGATATCCTTACCGTGGATGAAGAAACCGGCATCGGAAACAC
EY938507       <-- TCCTCCACTGATATCCTTACCGTGGATGAAGAAACCGGCGTCGGAAACAC
FD937234       --> ..................................................
EX909105       --> ..................................................
EY934627       --> ..................................................
EW730964       --> TCCTCCACTGATATCCTTACCGTGGATGAAGAAACCGGCGTCGGAAACAC
FD548143       --> TCCTCCACTGATATCCTTACCGTGGATGAAGAAACCGGCATCGGAAACAC

               751    -    801
UN26295        --> ACTTGACCTTAGCTGTTTTAGGGAGAATGGACTTGAACTGGTCGCAATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941633       <-- ..................................................
EX905392       <-- ..................................................
FD534973       <-- ..................................................
EV551355       <-- ACTTGACCTTAGCTGTTTTAGGGAGAATGGACTTGAACTGGTCGCAATGT
EY938507       <-- ACTTGACCTTAGCTGTTTTAGGGAGAATGGACTTGAACTGGTCGCAATGT
FD937234       --> ..................................................
EX909105       --> ..................................................
EY934627       --> ..................................................
EW730964       --> ACTTGACCT.........................................
FD548143       --> ACTTGACCT.........................................

               801    -    851
UN26295        --> AGAATAGAAGCCAATGCTCCGGCTGAACAACCAGAGAGTATCGCGTTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941633       <-- ..................................................
EX905392       <-- ..................................................
FD534973       <-- ..................................................
EV551355       <-- AGAATAGAAGCCAATGCTCCGGCTGAACAACCAGAGAGTATCGCGTTTTG
EY938507       <-- AGAATAGAAGCCAATGCTCCGGCTGAACAACCAGAGAGTATCGCGTTTTG
FD937234       --> ..................................................
EX909105       --> ..................................................
EY934627       --> ..................................................
EW730964       --> ..................................................
FD548143       --> ..................................................

               851    -    901
UN26295        --> AGCGTTGCTCATTCCCTTGGCCATAAGATCATCGATCACCGCACGCCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941633       <-- ..................................................
EX905392       <-- ..................................................
FD534973       <-- ..................................................
EV551355       <-- AGCGTTGCTCATTCCCTTGGCCATAAGATCATCGATCACCGCACGCCAAA
EY938507       <-- AGCGTTGCTCATTCCCTTGGCCATAAGATCATCGATCACCGCACGCCAAA
FD937234       --> ..................................................
EX909105       --> ..................................................
EY934627       --> ..................................................
EW730964       --> ..................................................
FD548143       --> ..................................................

               901    -    951
UN26295        --> CCCTAGCACCGCGGAAGAAGAGCTTGTTTGTCGGATCAACGGCTTCTATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941633       <-- ..................................................
EX905392       <-- ..................................................
FD534973       <-- ..................................................
EV551355       <-- CCCTAGCACCGCGGAAGAAGAGCTTGTTTGTCGGATCAACGGCTTCTATA
EY938507       <-- CCCTAGCACCGCGGAAGAAGAGCTTGTTTGTCGGATCAACGGCTTCTATA
FD937234       --> ..................................................
EX909105       --> ..................................................
EY934627       --> ..................................................
EW730964       --> ..................................................
FD548143       --> ..................................................

               951    -   1001
UN26295        --> TCACCGGTGAAAGATGAACCATCACAATATCGAACTTTGATTCTATTCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941633       <-- ..................................................
EX905392       <-- ..................................................
FD534973       <-- ..................................................
EV551355       <-- TCAC-GGTGAAAGATGAACCATCACAATATCGAACTTTGATTCTATTCCA
EY938507       <-- TCACCGGTGAAAGATGAACCATCACAATATCGAACTTTGATTCTATTCCA
FD937234       --> ..................................................
EX909105       --> ..................................................
EY934627       --> ..................................................
EW730964       --> ..................................................
FD548143       --> ..................................................

               1001   -   1051
UN26295        --> GTTATAGAAGTCTGGATTGGTGCTTTGCTTGCCCCCCAAGATACCAGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941633       <-- ..................................................
EX905392       <-- ..................................................
FD534973       <-- ..................................................
EV551355       <-- GTTATAGAAGTCTGGATTGGTGCTTTGCTTGCACCCCAAGATACCAGAGA
EY938507       <-- GTTATAGAAGTCTGGATTGGTGCTTTGCTTGCCCCCCAAGATACCAGAGA
FD937234       --> ..................................................
EX909105       --> ..................................................
EY934627       --> ..................................................
EW730964       --> ..................................................
FD548143       --> ..................................................

               1051   -   1101
UN26295        --> AACCAAAGTCTTTGTTCATAAACTTAGACGAACCCTTCATCGTAGTTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941633       <-- ..................................................
EX905392       <-- ..................................................
FD534973       <-- ..................................................
EV551355       <-- AACCAAAGTCTTTGTTCATAAACTTAGACGAACCCTTCATCGTAGTTTTA
EY938507       <-- AACCAAAGTCTTTGTTCATAAACTTAGACGAACCCTTCATCGTAGTTTTA
FD937234       --> ..................................................
EX909105       --> ..................................................
EY934627       --> ..................................................
EW730964       --> ..................................................
FD548143       --> ..................................................

               1101   -   1151
UN26295        --> CGTTTTACGCATGTAGCTATATCCGTGCACCATCCTCCTCCCTCCATATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941633       <-- ..................................................
EX905392       <-- ..................................................
FD534973       <-- ..................................................
EV551355       <-- CGTTTTACGCATGTAGCTATATCCGTGCACCATCCTCCTCCCTCCATATG
EY938507       <-- CGTTTTACGCATGTAGCTATATCCGTGCACCATCCTCCTCCCTCCATATG
FD937234       --> ..................................................
EX909105       --> ..................................................
EY934627       --> ..................................................
EW730964       --> ..................................................
FD548143       --> ..................................................

               1151   -   1201
UN26295        --> AACGATCCAGTTGTTTTCTCCTGAGCCAGATCCTTTATCGAAATGGTACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941633       <-- ..................................................
EX905392       <-- ..................................................
FD534973       <-- ..................................................
EV551355       <-- AACGATCCAGTTGTTTTCTCCTGAGCCAGATCCTTTATCGAAATGGTACG
EY938507       <-- AACGATCCAGTTGTTTGCTCCTGAGCCAGATCCTTTATCGAAATGGTACG
FD937234       --> ..................................................
EX909105       --> ..................................................
EY934627       --> ..................................................
EW730964       --> ..................................................
FD548143       --> ..................................................

               1201   -   1251
UN26295        --> CTGGCGCACTACCGTCCAAGCACAGATCCAGCCCCGAGCACAACTACGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941633       <-- ..................................................
EX905392       <-- ..................................................
FD534973       <-- ..................................................
EV551355       <-- CTGGCGCACTACCGTCCAAGCACAGATCCAGCCCCGAGCACAACTACGGC
EY938507       <-- CTGGCGCACTACCGTCCAAGCACAGATCCAGCCCCGAGCACAACTACGGC
FD937234       --> ..................................................
EX909105       --> ..................................................
EY934627       --> ..................................................
EW730964       --> ..................................................
FD548143       --> ..................................................

               1251   -   1301
UN26295        --> TAAGACCAGGAGACTTGACCATACTTGCTTCAGCCTCACCATCCTTGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941633       <-- ..................................................
EX905392       <-- ..................................................
FD534973       <-- ..................................................
EV551355       <-- TAAGACCAGGAGACTTGACCATACTTGCTTCAGCCTCACCATCCTTGAGA
EY938507       <-- TAAGACCAGGAGACTTGACCATACTTGCTTCAGCCTCACCATCCTTGAGA
FD937234       --> ..................................................
EX909105       --> ..................................................
EY934627       --> ..................................................
EW730964       --> ..................................................
FD548143       --> ..................................................

               1301   -   1351
UN26295        --> AATGGCTCTTCAGATTCTTATTCACGTAGAGAAATGTGTAAAAGAGGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941633       <-- ..................................................
EX905392       <-- ..................................................
FD534973       <-- ..................................................
EV551355       <-- AATGGCTCTTCAGATTCTTATTCACGTAGAGAAATGTGTAAAAGAGGAGT
EY938507       <-- AATGGCTCTTCAGATTCTTATTCACGTAGAGAAATGTGTAAAAGAGGAGT
FD937234       --> ..................................................
EX909105       --> ..................................................
EY934627       --> ..................................................
EW730964       --> ..................................................
FD548143       --> ..................................................

               1351   -   1401
UN26295        --> CTTCAAGAGTAAGGTTTACAAGTTCCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD941633       <-- ............................
EX905392       <-- ............................
FD534973       <-- ............................
EV551355       <-- CTTCAAGAGTAAGGTTTACcc.......
EY938507       <-- CTTCAAGAGTAAGGTTTACAAGTTCCCC
FD937234       --> ............................
EX909105       --> ............................
EY934627       --> ............................
EW730964       --> ............................
FD548143       --> ............................