Library    |     Search    |     Batch query    |     SNP    |     SSR  

Alignment for radish unigene UN26443

               1      -     51
UN26443        --> GAGGATTTGAAACCAGGGTTACAGAATTAGAACAGGAAGTGCAACAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532055       <-- ..................................................
EY920842       <-- ..................................................
FD554683       <-- ..................................................
FY444790       --> GAGGATTTGAAACCAGGGTTACAGAATTAGAACAGGAAGTGCAACAGAAG
FY447860       --> ..................................................
EY925342       --> ..................................................
FD558876       --> ..................................................

               51     -    101
UN26443        --> AACCTAGATTTGCAGAAAGCTGAAGCTTCTCGTGGGAAGATTTCCAAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532055       <-- ..................................................
EY920842       <-- ..................................................
FD554683       <-- ..................................................
FY444790       --> AACCTAGATTTGCAGAAAGCTGAAGCTTCTCGTGGGAAGATTTCCAAAAA
FY447860       --> .ACCTAGATTTGCAGAAAGCTGAAGCTTCTCGTGGGAAGATTTCCAAAAA
EY925342       --> ..................................................
FD558876       --> ..................................................

               101    -    151
UN26443        --> GCTATCAATTACTGTGGATAAATTCGACGAGCTCCATCAACTCTCTGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532055       <-- ..................................................
EY920842       <-- ..................................................
FD554683       <-- ..................................................
FY444790       --> GCTATCAATTACTGTGGATAAATTCGACGAGCTCCATCAACTCTCTGAAA
FY447860       --> GCTATCAATTACTGTGGATAAATTCGACGAGCTCCATCAACTCTCTGAAA
EY925342       --> ..................................................
FD558876       --> ..................................................

               151    -    201
UN26443        --> ATCTACTTGCTGAAATCGAGAAACTTCAACAACAAGTGCAAGATCGGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532055       <-- ..................................................
EY920842       <-- ..................................................
FD554683       <-- ..................................................
FY444790       --> ATCTACTTGCTGAAATCGAGAAACTTCAACAACAAGTGCAAGATCGGGAT
FY447860       --> ATCTACTTGCTGAAATCGAGAAACTTCAACAACAAGTGCAAGATCGGGAT
EY925342       --> ..................................................
FD558876       --> ..................................................

               201    -    251
UN26443        --> ACCGAGGTTTCTTTCTTAAGACAAGAAGTCACTAGGTGCACAAACGAGGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532055       <-- ..................................................
EY920842       <-- ..................................................
FD554683       <-- ..................................................
FY444790       --> ACCGAGGTTTCTTTCTTAAGACAAGAAGTCACTAGGTGCACAAACGAGGC
FY447860       --> ACCGAGGTTTCTTTCTTAAGACAAGAAGTCACTAGGTGCACAAACGAGGC
EY925342       --> .............................gACTAGGTGCACAAACGAGGC
FD558876       --> .............................gACTAGGTGCACAAACGAGGC

               251    -    301
UN26443        --> TCTTGTTGCTTCTCAGAAGGAAACTAAGAGAGATTCCGAAGAGATCCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532055       <-- ..................................................
EY920842       <-- ..................................................
FD554683       <-- ..................................................
FY444790       --> TCTTGTTGCTTCTCAGAAGGAAACTAAGAGAGATTCCGAAGAGATCCAAG
FY447860       --> TCTTGTTGCTTCTCAGAAGGAAACTAAGAGAGATTCCGAAGAGATCCAAG
EY925342       --> TCTTGTTGCTTCTCAGAAGGAAACTAAGAGAGATTCCGAAGAGATCCAAG
FD558876       --> TCTTGTTGCTTCTCAGAAGGAAACTAAGAGAGATTCCGAAGAGATCCAAG

               301    -    351
UN26443        --> TTGTACTGTCTTGGTTCGACACAATGGCTTCACTACTTGGTCTAGAAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532055       <-- ..................................................
EY920842       <-- ..................................................
FD554683       <-- ..................................................
FY444790       --> TTGTACTGTCTTGGTTCGACACAATGGCTTCACTACTTGGTCTAGAAGAT
FY447860       --> TTGTACTGTCTTGGTTCGACACAATGGCTTCACTACTTGGTCTAGAAGAT
EY925342       --> TTGTACTGTCTTGGTTCGACACAATGGCTTCACTACTTGGTCTAGAAGAT
FD558876       --> TTGTACTGTCTTGGTTCGACACAATGGCTTCACTACTTGGTCTAGAAGAT

               351    -    401
UN26443        --> TCACCTTCCACTGATGCTCGCAGTCACCTAAACCTCTACATGGAGCCACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532055       <-- .............ATGCTCGCAGTCACCTAAACCTCTACATGGAGCCACT
EY920842       <-- ...............................ACCTCTACATGGAGCCACT
FD554683       <-- ...............................ACCTCTACATGGAGCCACT
FY444790       --> TCACCTTCCACTGATGCTCGCAGTCACCTAAACCTCTACATGGAGCCACT
FY447860       --> TCACCTTCCACTGATGCTCGCAGTCACCTAAACCTCTACATGGAGCCACT
EY925342       --> TCACCTTCCACTGATGCTCGCAGTCACCTAAACCTCTACATGGAGCCACT
FD558876       --> TCACCTTCCACTGATGCTCGCAGTCACCTAAACCTCTACATGGAGCCACT

               401    -    451
UN26443        --> TGAGAAAAGGATCGCATCTATACTATCTGAAACAGAAGAGTTACGGCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532055       <-- TGAGAAAAGGATCGCATCTATACTATCTGAAACAGAAGAGTTACGGCTGG
EY920842       <-- TGAGAAAAGGATCGCATCTATACTATCTGAAACAGAAGAGTTACGGCTGG
FD554683       <-- TGAGAAAAGGATCGCATCTATACTATCTGAAACAGAAGAGTTACGGCTGG
FY444790       --> TGAGAAAAGGATTGCATCTATACTATCTGAAACAGAAGAGTTACGGCTGG
FY447860       --> TGAGAAAAGGATTGCATCTATACTATCTGAAACAGAAGAGTTACGGCTGG
EY925342       --> TGAGAAAAGGATCGCATCTATACTATCTGAAACAGAAGAGTTACGGCTGG
FD558876       --> TGAGAAAAGGATCGCATCTATACTATCTGAAACAGAAGAGTTACGGCTGG

               451    -    501
UN26443        --> TCGGACAAAGCAAGGATTCGCTGCTTGAAGCTGAGAGGAGTAGAGTGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532055       <-- TCGGACAAAGCAAGGATTCGCTGCTTGAAGCTGAGAGGAGTAGAGTGGCT
EY920842       <-- TCGGACAAAGCAAGGATTCGCTGCTTGAAGCTGAGAGGAGTAGAGTGGCT
FD554683       <-- TCGGACAAAGCAAGGATTCGCTGCTTGAAGCTGAGAGGAGTAGAGTGGCT
FY444790       --> TCGGACAAAGCAAGGATTCGCTGCTTGAAGCTGAGAGGAGTAGAGTGGCT
FY447860       --> TCGGACAAAGCAAGGATTCGCTGCTTGAAGCTGAGAGGAGTAGAGTGGCT
EY925342       --> TCGGACAAAGCAAGGATTCGCTGCTTGAAGCTGAGAGGAGTAGAGTGGCT
FD558876       --> TCGGACAAAGCAAGGATTCGCTGCTTGAAGCTGAGAGGAGTAGAGTGGCT

               501    -    551
UN26443        --> GAGCTCAGACAGAGAGAAGCAACTCTTGAGAAAATATTACATGACAAGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532055       <-- GAGCTCAGACAGAGAGAAGCAACTCTTGAGAAAATATTACATGACAAGGA
EY920842       <-- GAGCTCAGACAGAGAGAAGCAACTCTTGAGAAAATATTACATGACAAGGA
FD554683       <-- GAGCTCAGACAGAGAGAAGCAACTCTTGAGAAAATATTACATGACAAGGA
FY444790       --> GAGCTCAGACAGAGAGAAGCAACTCTTGAGAAAATATTACATGACAAGGA
FY447860       --> GAGCTCAGACAGAGAGAAGCAACTCTTGAGAAAATATTACATGACAAGGA
EY925342       --> GAGCTCAGACAGAGAGAAGCAACTCTTGAGAAAATATTACATGACAAGGA
FD558876       --> GAGCTCAGACAGAGAGAAGCAACTCTTGAGAAAATATTACATGACAAGGA

               551    -    601
UN26443        --> ATCCCAACCAAGAAGCTCGACTTCGGAGATCGTTGAAGTGGAACCTCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532055       <-- ATCCCAACCAAGAAGCTCGACTTCGGAGATCGTTGAAGTGGAACCTTTGA
EY920842       <-- ATCCCAACCAAGAAGCTCGACTTCGGAGATCGTTGAAGTGGAACCTCTGA
FD554683       <-- ATCCCAACCAAGAAGCTCGACTTCGGAGATCGTTGAAGTGGAACCTCTGA
FY444790       --> ATCCCAACCAAGAAGCTCGACTTCGGAGATCGTTGAAGTGGAACCTCTGA
FY447860       --> ATCCCAACCAAGAAGCTCGACTTCGGAGATCGTTGAAGTGGAACCTCTGA
EY925342       --> ATCCCAACCAAGAAGCTCGACTTCGGAGATCGTTGAAGTGGAACCTCTGA
FD558876       --> ATCCCAACCAAGAAGCTCGACTTCGGAGATCGTTGAAGTGGAACCTCTGA

               601    -    651
UN26443        --> TAAATAAGCGGACGACGATTGGAGCATCGATCCCATCTCAAGTCCGGAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532055       <-- TAAATAAGCGGACGACGAGTGGAGCATCGATCCCATCTCAAGTCCGGAGT  Raphanus raphanistrum subsp. maritimus
EY920842       <-- TAAATAAGCGGACGACGATTGGAGCATCGATCCCATCTCAAGTCCGGAGT  Raphanus raphanistrum subsp. landra
FD554683       <-- TAAATAAGCGGACGACGATTGGAGCATCGATCCCATCTCAAGTCCGGAGT  Raphanus raphanistrum subsp. landra
FY444790       --> TAAATAAGCGGACGACGAGTGGAGCATCGATCCCATCTCAAGTCCGGAGT  Raphanus sativus cv GSK3-1
FY447860       --> TAAATAAGCGGACGACGAGTGGAGCATCGATCCCATCTCAAGTCCGGAGT  Raphanus sativus cv GSK3-1
EY925342       --> TAAATAAGCGGACGACGATTGGAGCATCGATCCCATCTCAAGTCCGGAGT  Raphanus raphanistrum subsp. landra
FD558876       --> TAAATAAGCGGACGACGATTGGAGCATCGATCCCATCTCAAGTCCGGAGT  Raphanus raphanistrum subsp. landra

               651    -    701
UN26443        --> TTGCGTAAGGGAAACAACGATCAAGTAGCCATTAGTATAGATGCTGATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532055       <-- TTGCGTAAGGGAAACAACGATCAAGTAGCCATTAGTATAGATGCTGATCA
EY920842       <-- TTGCGTAAGGGAAACAACGATCAAGTAGCCATTAGTATAGATGCTGATCA
FD554683       <-- TTGCGTAAGGGAAACAACGATCAAGTAGCCATTAGTATAGATGCTGATCA
FY444790       --> TTGCGTAAGGGAAACAACGATCAAGTAGCCATTAGTATAGATGCTGATCA
FY447860       --> TTGCGTAAGGGAAACAACGATCAAGTAGCCATTAGTATAGATGCTGATCA
EY925342       --> TTGCGTAAGGGAAACAACGATCAAGTAGCCATTAGTATAGATGCTGATCA
FD558876       --> TTGCGTAAGGGAAACAACGATCAAGTAGCCATTAGTATAGATGCTGATCA

               701    -    751
UN26443        --> ACCTGATCAAAGCCTGAGCTTAGAAGACGACGATGATAAAGCTCATGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532055       <-- ACCTGATCAAAGCCTGAGCTTAGAAGACGACGATGATAAAGCTCATGGAT
EY920842       <-- ACCTGATCAAAGCCTGAGCTTAGAAGACGACGATGATAAAGCTCATGGAT
FD554683       <-- ACCTGATCAAAGCCTGAGCTTAGAAGACGACGATGATAAAGCTCATGGAT
FY444790       --> ACCTGATCAAAG......................................
FY447860       --> ACCTGATCAAAGCCTGAGCTTAGAAGACGACGATGACAAAGCTCATGGAT
EY925342       --> ACCTGATCAAAGCCTGAGCTTAGAAGACGACGATGATAAAGCTCATGGAT
FD558876       --> ACCTGATCAAAGCCTGAGCTTAGAAGACGACGATGATAAAGCTCATGGAT

               751    -    801
UN26443        --> TTAGATCACTCACCACGTCAAGAATCATTCCGAGATTTACAAGACCAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532055       <-- TTAGATCACTCACCACGTCAAGAATCATTCCGAGATTTACAAGACCAGTG
EY920842       <-- TTAGATCACTCACCACGTCAAGAATCATTCCGAGATTTACAAGACCAGTG
FD554683       <-- TTAGATCACTCACCACGTCAAGAATCATTCCGAGATTTACAAGACCAGTG
FY444790       --> ..................................................
FY447860       --> TTAGATCACTCACCACGTCAAGAATCATTCCGAGATTTACAAGACCAGTG
EY925342       --> TTAGATCACTCACCACGTCAAGAATCATTCCGAGATTTACAAGACCAGTG
FD558876       --> TTAGATCACTCACCACGTCAAGAATCATTCCGAGATTTACAAGACCAGTG

               801    -    851
UN26443        --> ACAAACATGATCGATGGTTTATGGGTCTCGTGTGACCGGACGCTTATGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532055       <-- ACAAACATGATCGATGGTTTATGGGTCTCGTGTGACCGGACGCTTATGAG
EY920842       <-- ACAAACATGATCGATGGTTTATGGGTCTCGTGTGACCGGACGCTTATGAG
FD554683       <-- ACAAACATGATCGATGGTTTATGGGTCTCGTGTGACCGGACGCTTATGAG
FY444790       --> ..................................................
FY447860       --> ACAAACATGATCGATGGTTTATGGGTCTCGTGTGACCGGACGCTTATGAG
EY925342       --> ACAAACATGATCGATGGTTTATGGGTCTCGTGTGACCGGACGCTTATGAG
FD558876       --> ACAAACATGATCGATGGTTTATGGGTCTCGTGTGACCGGACGCTTATGAG

               851    -    901
UN26443        --> ACAACCTGCATTACGGTTAGGCATAATGATATACTGGGCGATACTGCATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532055       <-- ACAACCTGCATTACGGTTAGGCATAATGATATACTGGGCGATACTGCATG
EY920842       <-- ACAACCTGCATTACGGTTAGGCATAATGATATACTGGGCGATACTGCATG
FD554683       <-- ACAACCTGCATTACGGTTAGGCATAATGATATACTGGGCGATACTGCATG
FY444790       --> ..................................................
FY447860       --> ACAACCTGCATTACGGTTAGGCATAATGATATACTGGGCGATACTGCATG
EY925342       --> ACAACCTGCATTACGGTTAGGCATAATGATATACTGGGCGATACTGCATG
FD558876       --> ACAACCTGCATTACG-TTAGGCATAATGATATACTGGGCGATACTGCATG

               901    -    951
UN26443        --> CTCTTTTGGCTAGTTTCGTAGTCTAACGAAAAATTTTAATCTCTTAGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532055       <-- CTCTTTTGGCTAGTTTCGTAGTCTAACGAAAAATTTTAATCTCTTAGTTT
EY920842       <-- CTCTTTTGGCTAGTTTCGTAGTCTAACGAAAAATTTTAATCTCTTAGTTT
FD554683       <-- CTCTTTTGGCTAGTTTCGTAGTCTAACGAAAAATTTTAATCTCTTAGTTT
FY444790       --> ..................................................
FY447860       --> CTCTTTTGGC........................................
EY925342       --> CTCTTTTGGCTAGTTTCGTAGTCTAACGA.....................
FD558876       --> CTCTTT-GGCTAGTTTCGTAGTCTA-CGAAAA..................

               951    -   1001
UN26443        --> CTCGCTATGGAACGGGCTCAAAGTGGTGTGCTGTTTTCACCTATATGCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532055       <-- CTCGCTATGGAACGGGCTCAAAGTGGTGTGCTGTTTTCACCTATATGCTT
EY920842       <-- CTCGCTATGGAACGGGCTCAAAGTGGTGTGCTGTTTTCACCTATATGCTT
FD554683       <-- CTCGCTATGGAACGGGCTCAAAGTGGTGTGCTGTTTTCACCTATATGCTT
FY444790       --> ..................................................
FY447860       --> ..................................................
EY925342       --> ..................................................
FD558876       --> ..................................................

               1001   -   1051
UN26443        --> TGTTTTCTATACATTGTTTTGCTTTTTATTAACCAAGCAAACCGTGGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532055       <-- TGTTTTCTATACATTGTTTTGCTTTTTATTAACCAAGCAAACCGTGGTTT
EY920842       <-- TGTTTTCTATACATTGTTTTGCTTTTTATTAACCAAGCAAACCGTGGTTT
FD554683       <-- TGTTTTCTATACATTGTTTTGCTTTTTATTAACCAAGCAAACCGTGGTTT
FY444790       --> ..................................................
FY447860       --> ..................................................
EY925342       --> ..................................................
FD558876       --> ..................................................

               1051   -   1101
UN26443        --> CGCCATTTTTATTGATCAGAATCACAAACTGCTTGACTTTACATCCGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532055       <-- CGCCATTTTTATTGATCAGAATCACAAACTGCTTGACTTTACATCCGAAT
EY920842       <-- CGCCATTTTTATTGATCAGAATCACAAACTGCTTGACTTTACATCCGAAT
FD554683       <-- CGCCATTTTTATTGATCAGAATCACAAACTGCTTGACTTTACATCCGAAT
FY444790       --> ..................................................
FY447860       --> ..................................................
EY925342       --> ..................................................
FD558876       --> ..................................................

               1101   -   1151
UN26443        --> AAGAAAAAAGGTTTTATGGATTAGATGTTGAAATATATTAGACCATGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV532055       <-- AAGAAAAAAGGTTTTATGTATTAGATGTTGAAATATATTAGACCATGACT
EY920842       <-- AAGAAAAAAGGTTTTATGG...............................
FD554683       <-- AAGAAAAAAGGTTTTATGG...............................
FY444790       --> ..................................................
FY447860       --> ..................................................
EY925342       --> ..................................................
FD558876       --> ..................................................

               1151   -   1201
UN26443        --> ATATAATATAAGTGACTGTTCAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~
EV532055       <-- ATATAATATAAGTGACTGTTCAAT
EY920842       <-- ........................
FD554683       <-- ........................
FY444790       --> ........................
FY447860       --> ........................
EY925342       --> ........................
FD558876       --> ........................