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Alignment for radish unigene UN26464

               1      -     51
UN26464        --> AGCAAAAACAATACTTATACAAATATAACTGACACTTGTTTCTTTAGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570728       <-- ..................................................
EV566535       <-- ..................................................
FD533265       <-- ..................................................
EW733218       <-- ..................................................
EW737851       --> AGCAAAAACAATACTTATACAAATATAACTGACACTTGTTTCTTTAGTAC
FD574681       --> ..................................................
EV571646       --> ..................................................
EY895013       --> ..................................................
FD529502       --> ..................................................

               51     -    101
UN26464        --> AGACTTCCTTCCACATGCTTGAATCTCCCATTGGATAAATGTAATGGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570728       <-- ..................................................
EV566535       <-- ..................................................
FD533265       <-- ..................................................
EW733218       <-- ..................................................
EW737851       --> AGACTTCCTTCCACATGCTTGAATCTCCCATTGGATAAATGTAATGGAGA
FD574681       --> ..................................................
EV571646       --> ..................................................
EY895013       --> ..................................................
FD529502       --> ..................................................

               101    -    151
UN26464        --> AAAAAAAAAGGAGCAGAGACAATCCAAACGCTAAAATCCACCCCCAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570728       <-- ..................................................
EV566535       <-- ..................................................
FD533265       <-- ..................................................
EW733218       <-- ..................................................
EW737851       --> AAAAAAAAAGGAGCAGAGACAATCCAAACGCTAAAATCCACCCCCAGAAA
FD574681       --> ..................................................
EV571646       --> ..................................................
EY895013       --> ..................................................
FD529502       --> ..................................................

               151    -    201
UN26464        --> CTTTGCTAAAAAGCTGCACAATAACAGGGTGAATAACAACTGGACCTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570728       <-- ....GCTAAAAAGCTGCACAATAACAGGGTGAATAACAACTGGACCTGTC
EV566535       <-- ..................................................
FD533265       <-- ..................................................
EW733218       <-- ..................................................
EW737851       --> CTTTGCTAAAAAGCTGCACAATAACAGGGTGAATAACAACTGGACCTGTC
FD574681       --> ....GCTAAAAAGCTGCACAATAACAGGGTGAATAACAACTGGACCTGTC
EV571646       --> ..............................GAATAGCAACTGAACCTGTC
EY895013       --> ..................................................
FD529502       --> ..................................................

               201    -    251
UN26464        --> TCTATTTACAAATATCAAATGAAAGAATCATAAATACGAGATTTGATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570728       <-- TCTATTTACAAATATCAAATGAAAGAATCATAAATACGAGATTTGATTTT
EV566535       <-- ..................................................
FD533265       <-- ..................................................
EW733218       <-- ..................................................
EW737851       --> TCTATTTACAAATATCAAATGAAAGAATCATAAATACGAGATTTGATTTT
FD574681       --> TCTATTTACAAATATCAAATGAAAGAATCATAAATACGAGATTTGATTTT
EV571646       --> TCTATTTACAAATATCAAATGAAAGAATCATAAATACGAGATTTGATTTT
EY895013       --> ..................................................
FD529502       --> ..................................................

               251    -    301
UN26464        --> CTTTTTCTTTTTTGAGTATGATAATCAAATAATAATAGCTTTTTAATGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570728       <-- CTTTTTCTTTTTTGAGTATGATAATCAAATAATAATAGCTTTTTAATGTT
EV566535       <-- ..................................................
FD533265       <-- ..................................................
EW733218       <-- ..................................................
EW737851       --> CTTTTTCTTTTTTGAGTATGATAATCAAATAATAATAGCTTTTTAATGTT
FD574681       --> CTTTTTCTTTTTTGAGTATGATAATCAAATAATAATAGCTTTTTAATGTT
EV571646       --> CTTTTT-TTTTTTGAGTATGATAATCAAATAATAATAGCT-ATTAATGTT
EY895013       --> .............ggGTATGATAATCAAATAATAATAGCTTTTTAATGTT
FD529502       --> .......................................TTTTTAATGTT

               301    -    351
UN26464        --> TTTTCAAGCTTTGTCCCTTCTTCAAGAGTCACACTCCTTAGGTTGAACAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570728       <-- TTTTCAAGCTTTGTCCCTTCTTCAAGAGTCACACTCCTTAGGTTGAACAC
EV566535       <-- ..................................................
FD533265       <-- ..................................................
EW733218       <-- ..................................................
EW737851       --> TTTTCAAGCTTTGTCCCTTCTTCAAGAGTCACACTCCTTAGGTTGAACAC
FD574681       --> TTTTCAAGCTTTGTCCCTTCTTCAAGAGTCACACTCCTTAGGTTGAACAC
EV571646       --> TTTTCAAGCTTTGTCCCTTCTTCAAGAGTCACACTCCTTGGGTTGAACAC
EY895013       --> TTTTCAAGCTTTGTCCCTTCTTCAAGAGTCACACTCCTTAGGTTGAACAC
FD529502       --> TTTTCAAGCTTTGTCCCTTCTTCAAGAGTCACACTCCTTAGGTTGAACAC

               351    -    401
UN26464        --> ACCATTGGTCAGGGACGCATAAGAAATGAGTCTTCATGAATTTCCTGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570728       <-- ACCATTGGTCAGGGACGCATAAGAAATGAGTCTTCATGAATTTCCTGAAC
EV566535       <-- ..................................................
FD533265       <-- ..................................................
EW733218       <-- ..................................................
EW737851       --> ACCATTGGTCAGGGACGCATAAGAAATGAGTCTTCATGAATTTCCTGAAC
FD574681       --> ACCATTGGTCAGGGACGCATAAAAAATGAGTCTTCATGAATTTCCTGAAC
EV571646       --> ACCATTGGTCAGGGACGCATAAAAAATGAGTCTTCATGAATTTCCTGAAC
EY895013       --> ACCATTGGTCAGGGACGCATAAGAAATGAGTCTTCATGAATTTCCTGAAC
FD529502       --> ACCATTGGTCAGGGACGCATAAGAAATGAGTCTTCATGAATTTCCTGAAC

               401    -    451
UN26464        --> CTCGTCTTGTAATCAATAGGGCTGATCACTGTCGGCTGCACATTCTTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570728       <-- CTCGTCTTGTAATCAATAGGACTGATCACTGTCGGCTGCACATTCTTTAG  Raphanus sativus cv Early Scarlet Globe
EV566535       <-- ......cTGTAATCAATAGGGCTGATCACTGTCGGCTGCACATTCTTTGG  Raphanus raphanistrum subsp. landra
FD533265       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW733218       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW737851       --> CTCGTCTTGTAATCAATAGGACTGATCACTGTCGGCTGCACATTCTTTGG  Raphanus sativus cv Rat-Tail Radish #3870
FD574681       --> CTCGTCTTGTAATCAATAGGACTGATCACTGTCGGCTGCACATTCTTTAG  Raphanus sativus cv Early Scarlet Globe
EV571646       --> CTCGTCTTGTAATCAATAGGGCTGATCACTGTCGGCTGCACATTCTTTGG  Raphanus raphanistrum subsp. landra
EY895013       --> CTCGTCTTGTAATCAATAGGGCTGATCACTGTCGGCTGCACATTCTTTGG  Raphanus raphanistrum subsp. maritimus
FD529502       --> CTCGTCTTGTAATCAATAGGGCTGATCACTGTCGGCTGCACATTCTTTGG  Raphanus raphanistrum subsp. maritimus

               451    -    501
UN26464        --> AACCACCAAAGACGATTTCACCCACGTCTCTAACTGCTTGTCCCATGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570728       <-- AACCACCAAAGACGATTTCACCCACGTCTCTAACTGCTTGTCCCATGTGT
EV566535       <-- AACCACCAAAGACGATTTCACCCACGTCTCTAACTGCTTGTCCCATGTGT
FD533265       <-- ................TTCACCCACGTCTCTAACTGCTTGTCCCATGTGT
EW733218       <-- ..................................................
EW737851       --> AACCACCAAAGACGATTTCACCCACGTCTCTAACTGCTTGTCCCATGTGT
FD574681       --> AACCACCAAAGACGATTTCACCCACGTCTCTAACTGCTTGTCCCATGTGT
EV571646       --> AACCACCAAAGACGATTTCACCCACGTCTCTAACTGCTTGTCCCATGTGT
EY895013       --> AATCACCAAAGACGATTTCACCCACGTCTCTAACTGCTTGTCCCATGTGT
FD529502       --> AACCACCAAAGACGATTTCACCCACGTCTCTAACTGCTTGTCCCATGTGT

               501    -    551
UN26464        --> ATTGCCTCAAGTAGTCTATTATCCCACACACTAGCTCATGACTCTCATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570728       <-- ATTGCCTCAAGTAGTCTATTATCCCACACACTAGCTCATGGCTCTCATCA
EV566535       <-- ATTGCCTCAAGTAGTCTATTATCCCACACACTAGCTCATGACTCTCATCA
FD533265       <-- ATTGCCTCAAGTAGTCTATTATCCCACACACTAGCTCATGACTCTCATCA
EW733218       <-- ..................................................
EW737851       --> ATTGCCTCAAGTAGTCTATTATCCCACACACTAGCTCATGACTCTCATCA
FD574681       --> ATTGCCTCAAGTAGTCTATTATCCCACACACTAGCTCATGGCTCTCATCA
EV571646       --> ATTGCCTCAAGTAGTCTATTATCCCACACACTAGCTCATGACTCTCATCA
EY895013       --> ATTGCCTCAAGTAGTCTATTATCCCACACACTAGCTCATGACTCTCATCA
FD529502       --> ATTGCCTCAAGTAGTCTATTATCCCACACACTAGCTCATGACTCTCATCA

               551    -    601
UN26464        --> TCTACTCCAACTAGCAACGAGTAGTCCATCACGTTTATACTGGTTAGGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570728       <-- TCTACTCCAACTAGCAACGAGTAGTCCATCACGTTTATACTGGTTAGGAA  Raphanus sativus cv Early Scarlet Globe
EV566535       <-- TCTACTCCAACCAGCAACGAGTAGTCCATCACGTTTATACTGGTTAGGAA  Raphanus raphanistrum subsp. landra
FD533265       <-- TCTACTCCAACCAGCAACGAGTAGTCCATCACGTTTATACTGGTTAGGAA  Raphanus raphanistrum subsp. maritimus
EW733218       <-- ..................................................  Raphanus sativus cv Rat-Tail Radish #3870
EW737851       --> TCTACTCCAACTAGCAACGAGTAGTCCATCACGTTTATACTGGTTAGGAA  Raphanus sativus cv Rat-Tail Radish #3870
FD574681       --> TCTACTCCAACTAGCAACGAGTAGTCCATCACGTTTATACTGGTTAGGAA  Raphanus sativus cv Early Scarlet Globe
EV571646       --> TCTACTCCAACCAGCAACGAGTAGTCCATCACGTTTATACTGGTTAGGAA  Raphanus raphanistrum subsp. landra
EY895013       --> TCTACTCCAACTAGCAACGAGTAGTCCATCACGTTTATACTGGTTAGGAA  Raphanus raphanistrum subsp. maritimus
FD529502       --> TCTACTCCAACCAGCAACGA..............................  Raphanus raphanistrum subsp. maritimus

               601    -    651
UN26464        --> GGCTGTGTCGTTGTAAACCGCTCTTTGAAGATTTTGCTTTGATGTTTTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570728       <-- GGCTGTGTCGTTGTAAACCGCTCTTTGAAGATTTTGCTTTGATGTTTTGC
EV566535       <-- GGCTGTGTCGTTGTAAACCGCTCTTTGAAGATTCTGCTTTGATGTTTTGC
FD533265       <-- GGCTGTGTCGTTGTAAACCGCTCTTa........................
EW733218       <-- ....GTGTCGTTGTAAACCGCTCTTTGAAGACTTTGCTTTGATGTTTTGC
EW737851       --> GGCTGTGTCGTTGTAAACCGCTCTTTGAAGACTTTGCTTTGATGTTTTGC
FD574681       --> GGCTGTGTCGTTGTAAACCGCTCTTTGAAGATTTTGCTTTGATGTTTTGC
EV571646       --> GGCTGTGTCGTTGTAAACCGCTCTTTGAAGATTCTGCTTTGATGTTTTGC
EY895013       --> GGCTGTGTCGTTGTAAACCGCTCTTTGGAGATTTTGCTTTGATGTTTTGC
FD529502       --> ..................................................

               651    -    701
UN26464        --> TAACGTAAAGCGGGGATTTGTTCATGTCGTTGACAAAGTTCTGATCCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570728       <-- TAACGTAAAGCGGGGATTTGTTCATGTCGTTGGCAAAGTTATGATCCAAC
EV566535       <-- TAACGTAAAGCGGGGATTTGTTCATGTCGTTGACAAAGTTCTGATCCAAC
FD533265       <-- ..................................................
EW733218       <-- TAACGTAAAGCGGGGATTTGTTCATGTCGTTGACAAAGTTCTGATCCAAC
EW737851       --> TAACGTAAAGCGGGGATTTGTTCATGTCGTTGACAAAGTTCTGATCCAAC
FD574681       --> TAACGTAAAGCGGGGATTTGTTCATGTCGTTGGCAAAGTTATGATCCAAC
EV571646       --> TAACGTAAAGCGGGGATTTGTTCATGTCGTTGACAAAGTTCTGATCCAAC
EY895013       --> TAACGTAAAGCGGGGATTTGTTCATGTCGTTGACAAAGTTCTGATCCAAC
FD529502       --> ..................................................

               701    -    751
UN26464        --> AGAACATCTTCCCCGCCATTAGCAGAAGTAGCCGTAAACCGAGCGTGTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570728       <-- AGAACATCTTCCCCGCCATTAGCAGAAGTAGCCGTAAACCGAGCGTGTAG  Raphanus sativus cv Early Scarlet Globe
EV566535       <-- AGAACATCTTCCGAGCCATTAGCAGAAGTAGCCGTAAACCGAGCGTGTAG  Raphanus raphanistrum subsp. landra
FD533265       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW733218       <-- AGAACATCTTCCCCGCCATTAGCAGAAGTAGCCGTAAACCGAGCGTGTAG  Raphanus sativus cv Rat-Tail Radish #3870
EW737851       --> AGAACATCTTCCCCGCCATTAGCAGAAGTAGCCGTAAACCGAGCGTGTAG  Raphanus sativus cv Rat-Tail Radish #3870
FD574681       --> AGAACATCTTCCCCGCCATTAGCAGAAGTAGCCGTAAACCGAGCGTGTAG  Raphanus sativus cv Early Scarlet Globe
EV571646       --> AGAACATCTTCCGAGCCATTAGCAGAAGTAGCCGTAAACCGAGCGTGTAG  Raphanus raphanistrum subsp. landra
EY895013       --> AGAACATCTTCCGAGCCATTAGCAGAAGTAGCCGTAAACCGAGCGTGTAG  Raphanus raphanistrum subsp. maritimus
FD529502       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               751    -    801
UN26464        --> AGCGCCTTTGAGATCGTATTGGCGAGTAATTTTTCTGCCAAAACTGAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570728       <-- AGCGCCTTTGAGATCGTATTGGCGAGTAATTTTTCTGCCAAAACTGAGAT  Raphanus sativus cv Early Scarlet Globe
EV566535       <-- AGCGCCTTTGAGATCGTATTGGCGAGTAATGTTTCTGCCAAAACTGAGAT  Raphanus raphanistrum subsp. landra
FD533265       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EW733218       <-- AGCGCCTTTGAGATCGTATTGGCGAGTAATTTTTCTGCCAAAACTGAGAT  Raphanus sativus cv Rat-Tail Radish #3870
EW737851       --> AGCGCCTTTGAGATCGTATTGGCGAGTAATTTTTCTGCCAAAACTGAGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD574681       --> AGCGCCTTTGAGATCGTATTGGCGAGTAATTTTTCTGCCAAAACTGAGAT  Raphanus sativus cv Early Scarlet Globe
EV571646       --> AGCGCCTTTGAGATCGTATTGGCGAGTAATGTTTCTGCCAAAACTGAGAT  Raphanus raphanistrum subsp. landra
EY895013       --> AGCGCCTTTGAGATCGTATTGGCGAGTAATGTTTCTGCCAAAACTGAGAT  Raphanus raphanistrum subsp. maritimus
FD529502       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               801    -    851
UN26464        --> TCTCCATTACCATCAGGTCGTGCCTTGTCTCTTTCCCGCTCTTCGGCTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570728       <-- TCTCCATTACCATCAGGc................................
EV566535       <-- TCTCCATTACCATCAGGTCGTGCCTTGTCTCTTTCCCGCTCTTCGGCTGC
FD533265       <-- ..................................................
EW733218       <-- TCTCCATTACCATCAGGTCGTGCCTTGTCTCTTTCCCGCTCTTCGGCTGC
EW737851       --> TCTCCATTACCA......................................
FD574681       --> TCTCCATTACCATCAGGc................................
EV571646       --> TCTCCATTACCATCAGGTCGTGCCTTGTCTCTTTCCCGCTCTTCGGCTGC
EY895013       --> TCTCCATTACCATCAGGTCGTGCCTTGTCTCTTTCCCGCTCTTCGGCTGC
FD529502       --> ..................................................

               851    -    901
UN26464        --> CTTACAGTTACCTGATAGATCCCAAGAACTTTGGCAAGACAAGTCTGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570728       <-- ..................................................
EV566535       <-- CTTACAGTTACCTGATAGATCCCAAGAACTTTGGCAAGACAAGTCTGGTT
FD533265       <-- ..................................................
EW733218       <-- CTTACAGTTACCTGATAGATCCCAAGAACTTTGGCAAGACAAGTCTGGTT
EW737851       --> ..................................................
FD574681       --> ..................................................
EV571646       --> CTTACAGTTACCTGATAGATCCCAAGAACTTTGGCAAGACAAGTCTGGTT
EY895013       --> CTTACAGTTACCTGATAGATCCCAAGAACTTTGGCAAGACAAGTCTGGTT
FD529502       --> ..................................................

               901    -    951
UN26464        --> GCCTAGATCATACGAATCCTTCATGTACTTGAAATATTCCGGAGCAAACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570728       <-- ..................................................
EV566535       <-- GCCTAGATCATACGAATCCTTCATGTACTTGAAATATTCCGGAGCAAACG
FD533265       <-- ..................................................
EW733218       <-- GCCTAGATCATACGAATCCTTCATGTACTTGAAATATTCCGGAGCAAACG
EW737851       --> ..................................................
FD574681       --> ..................................................
EV571646       --> GCCTAGATCATACGAATCCTTCATGTACTTGAAATATTCCGGAGCAAACG
EY895013       --> GCCTAGATCATACGAA..................................
FD529502       --> ..................................................

               951    -   1001
UN26464        --> TCTCAAACGATTCGTACTCTGTCTTCTTGATCTCTTTTACAATGAACCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570728       <-- ..................................................
EV566535       <-- TCTCAAACGATTCGTACTCTGTCTTCTTGATCTCTTTTACAATGAACCTA
FD533265       <-- ..................................................
EW733218       <-- TCACAAATGATTCGTACTCTGTCTTCTTGATCTCTTTGACAATGAACCTA
EW737851       --> ..................................................
FD574681       --> ..................................................
EV571646       --> TCTCAAACGATTCGTACTCTGTCTTCTTGATCTCTTTTACAATGAACCTA
EY895013       --> ..................................................
FD529502       --> ..................................................

               1001   -   1051
UN26464        --> TCATCCAAAGTCTTAGCGAACACTGATTTGCTCTTCCCGCCCTTGGCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570728       <-- ..................................................
EV566535       <-- TCATCCAAAGTCTTAGCGAACACTGATTTGCTCTTCCCGCCCTTGGCATC
FD533265       <-- ..................................................
EW733218       <-- TCATCCAAAGTCTTAGCGAACACTGATTTGCTCTTCCCGCCCTTGGCATC
EW737851       --> ..................................................
FD574681       --> ..................................................
EV571646       --> TCATCCAAAGTCTTA...................................
EY895013       --> ..................................................
FD529502       --> ..................................................

               1051   -   1101
UN26464        --> CCACGGCTTACAACGGCTAAGCGAGGCAATATAGTCAAGCTCTGAGGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570728       <-- ..................................................
EV566535       <-- CCACGGCTTACAACGGCTAAGCGAGGCAATATAGTCAAGCTCTGAGGAGC
FD533265       <-- ..................................................
EW733218       <-- CCACGGCTTACAACGGCTAAGCGAGGCAATATAGTCAAGCTCTGAGGAGC
EW737851       --> ..................................................
FD574681       --> ..................................................
EV571646       --> ..................................................
EY895013       --> ..................................................
FD529502       --> ..................................................

               1101   -   1151
UN26464        --> AACAACGCTTTCTGAGGTCGCGGAAATCATCAGCATATAGGCACACAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570728       <-- ..................................................
EV566535       <-- AACAACGCTTTCTGAGGTCGCGGAAATCATCAGCATATAAGCACACAATA
FD533265       <-- ..................................................
EW733218       <-- AACAACGCTTTCTGAGGTCGCGGAAATCATCAGCATATAGGCACACAATA
EW737851       --> ..................................................
FD574681       --> ..................................................
EV571646       --> ..................................................
EY895013       --> ..................................................
FD529502       --> ..................................................

               1151   -   1201
UN26464        --> GAGTATTTGGGTTTTCCAACTGATTTGAGTGATCCAAAATTAACAAAGAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570728       <-- ..................................................
EV566535       <-- GAGTATTTGGGTTTTCCAACTGATTTGAG.....................
FD533265       <-- ..................................................
EW733218       <-- GAGTATTTGGGTTTCCCAACTGATTTGAGTGATCCAAAATTAACAAAGAC
EW737851       --> ..................................................
FD574681       --> ..................................................
EV571646       --> ..................................................
EY895013       --> ..................................................
FD529502       --> ..................................................

               1201   -   1251
UN26464        --> CTCTGGAGGTGGTGGTATCTCCAACCGACTCGTACTCTCACTCGAATAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570728       <-- ..................................................
EV566535       <-- ..................................................
FD533265       <-- ..................................................
EW733218       <-- CTCTGGAGGTGGTGGTATCTCCAACCGACTCGTACTCTCACTCGAATAAC
EW737851       --> ..................................................
FD574681       --> ..................................................
EV571646       --> ..................................................
EY895013       --> ..................................................
FD529502       --> ..................................................

               1251   -   1301
UN26464        --> GAGAAACCTCACGGTCAACAGTCTGCTTAGAATCTTGATCTTTATCCAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570728       <-- ..................................................
EV566535       <-- ..................................................
FD533265       <-- ..................................................
EW733218       <-- GAGAAACCTCACGGTCAACAGTCTGCTTAGAATCTTGATCTTTATCCAGG
EW737851       --> ..................................................
FD574681       --> ..................................................
EV571646       --> ..................................................
EY895013       --> ..................................................
FD529502       --> ..................................................

               1301   -   1351
UN26464        --> AACCCTTCAAGAGATCCATGTATGCACCATGAAAGAGGCAATCTGTTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD570728       <-- ..................................................
EV566535       <-- ..................................................
FD533265       <-- ..................................................
EW733218       <-- AACCCTTCAAGAGATCCATGTATGCACCATGAAAGAGGCAATCTGTTATC
EW737851       --> ..................................................
FD574681       --> ..................................................
EV571646       --> ..................................................
EY895013       --> ..................................................
FD529502       --> ..................................................

               1351   -   1401
UN26464        --> CC
                   ~~
FD570728       <-- ..
EV566535       <-- ..
FD533265       <-- ..
EW733218       <-- CC
EW737851       --> ..
FD574681       --> ..
EV571646       --> ..
EY895013       --> ..
FD529502       --> ..