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Alignment for radish unigene UN26466

               1      -     51
UN26466        --> GTCATATATATCAAACCCGGTTTAAACAAAACATAACCAATAAAACCGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- ..................................................
FD972088       <-- ..................................................
FD965372       <-- ..................................................
EV566773       <-- ..................................................
EV571826       --> GTCATATATATCAAACCCGGTTTAAACAAAACATAACCAATAAAACCGGA
EX892758       --> ..................................................
FD961135       --> ..................................................
FD968058       --> ..................................................
FY443923       --> ..................................................

               51     -    101
UN26466        --> CCACGATGATATAACAAGTCCAGACCCAGCTCTATTCAAAAGTCTGATCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- ..................................................
FD972088       <-- ..................................................
FD965372       <-- ..................................................
EV566773       <-- ..................................................
EV571826       --> CCACGATGATATAACAAGTCCAGACCCAGCTCTATTCAAAAGTCTGATCC
EX892758       --> ..................................................
FD961135       --> ..................................................
FD968058       --> ..................................................
FY443923       --> ..................................................

               101    -    151
UN26466        --> ACCACCATAAAGCACAACAAACAAGTCTTTCATTTAACTTTTACACATTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- ..................................................
FD972088       <-- ..................................................
FD965372       <-- ..................................................
EV566773       <-- ..................................................
EV571826       --> ACCACCATAAAGCACAACAAACAAGTCTTTCATTTAACTTTTACACATTA
EX892758       --> ..................................................
FD961135       --> ..................................................
FD968058       --> ..................................................
FY443923       --> ..................................................

               151    -    201
UN26466        --> TTTTTAAACATCAGAGATTCAGCCCTCATTCTCTTCACATCTTTTCCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- ..................................................
FD972088       <-- ..................................................
FD965372       <-- ..................................................
EV566773       <-- ..................................................
EV571826       --> TTTTTAAACATCAGAGATTCAGCCCTCATTCTCTTCACATCTTTTCCTTA
EX892758       --> ..................................................
FD961135       --> ..................................................
FD968058       --> ..................................................
FY443923       --> ..................................................

               201    -    251
UN26466        --> TTCCTCATCGTCATCATCTTCCTTCTTTTTCCTTCATCCTCTCAACCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- ..................................................
FD972088       <-- ..................................................
FD965372       <-- ..................................................
EV566773       <-- ..................................................
EV571826       --> TTCCTCATCGTCATCATCTTCCTTCTTTTTCCTTCATCCTCTCAACCAAG
EX892758       --> ..............................CCTTCATCCTCTCAACCATG
FD961135       --> ..............................CCTTCATCCTCTCAACCAAG
FD968058       --> ..............................CCTTCATCCTCTCAACCAAG
FY443923       --> ..............................CCTTCATCCTCTCA-CCATG

               251    -    301
UN26466        --> TCATTATATATAAGCTTTAAATTTATGTCTGATATTGGTTGAGAACTGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- ..................................................
FD972088       <-- ..................................................
FD965372       <-- ..................................................
EV566773       <-- ..................................................
EV571826       --> TCATTATATATAAGCTTTAAATTTATGTCTGATATTGGTTGAGAACTGAG
EX892758       --> TCATTATATATAAGCTTTAAATTCATGTCTGATATTGGTTGAGAACTGAG
FD961135       --> TCATTATATATAAGCTTTAAATTTATGTCTGATATTGGTTGAGAACTGAG
FD968058       --> TCATTATATATAAGCTTTAAATTTATGTCTGATATTGGTTGAGAACTGAG
FY443923       --> TCATTATATATAAGCTTTAAATTCATGTCTGATATTGGTTGAAAACTGAG

               301    -    351
UN26466        --> ATCTTCTGAAAGAGCAGATTGAAAATCTTCAAACATCCATGAGGCGACCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- ..................................................
FD972088       <-- ..................................................
FD965372       <-- ..................................................
EV566773       <-- ..................................................
EV571826       --> ATCTTCTGAAAGAGCAGATTGAAAATCTTCAAACATCCATGAGGCGACCA
EX892758       --> ATCTTCTGAAAGAGCAAATTTAAAATCTTCAAACATCCATGACGCTACCA
FD961135       --> ATCTTCTGAAAGAGCAGATCGAAAATCTTCAAACATCCATGAGGCGACCA
FD968058       --> ATCTTCTGAAAGAGCAGATTGAAAATCTTCAAACATCCATGAGGCGACCA
FY443923       --> ATCTTCTGAAAGAGCAGATTTAAAATCTTCAAACATCCATGACGCTACCA

               351    -    401
UN26466        --> TGGAAACCTTCCTTGACTTCATCGCATCCTTTACGCGACTCTTGTCCTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- ..............GACTTCATCGCATCCTT-ACGCGACTCT-GTCCTCG
FD972088       <-- ..................................................
FD965372       <-- ..................................................
EV566773       <-- ..................................................
EV571826       --> TGGAAACCTTCCTTGACTTCATCGCATCCTTTACGCGACTCTCGTCCTCG
EX892758       --> TGGAAACCTTCCTTGACTTCATCGCATCCTTTACGCGACTCTTGTCCTCG
FD961135       --> TGGAAACCTTCCTTGACTTCATCGCATCCTTTACGCGACTCTTGTCCTCG
FD968058       --> TGGAAACCTTCCTTGACTTCATCGCATCCTTTACGCGACTCTTGTCCTCG
FY443923       --> TGGAAACCTTCCTTGACTTCATCGCATCCTTTACGCGACTCTTGTCCTCG

               401    -    451
UN26466        --> TGATACTGCTTCTCTAATTCTTCCGTGATATCTTCGAATAGGTCTTTCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- TGATACTGCTTCTCTAATTCTTCCGTGATATCTTCGAATAGGTCTTTCGG
FD972088       <-- ..................................................
FD965372       <-- ..................................................
EV566773       <-- ..................................................
EV571826       --> TGATACTGCTTCTCTAATTCTTCCGTGATATCTTCGAATAGGTCTTTCGG
EX892758       --> TGATACTGCTTCTCTAATTCTTCCGCGATATCTTCGAATAAGTCTTTCGG
FD961135       --> TGATACTGCTTCTCTAATTCTTCCGTGATATCTTCGAATAGGTCTTTCGG
FD968058       --> TGATACTGCTTCTCTAATTCTTCCGTGATATCTTCAAATAAGTCTTTCGG
FY443923       --> TGATACTGCTTCTCTAATTCTTCCGTGATATCTTCGAATAAGTCTTTCGG

               451    -    501
UN26466        --> AGTTGAGCCAGACAAATTAGATGCAACAGCTTGGTATTGAGGCAAGTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- AGTTGAGCCAGACAAATTAGATGCAACAGCTTGGTATTGAGGCAAGTCTC
FD972088       <-- ......................................GAGGCAAGTCTC
FD965372       <-- ..................................................
EV566773       <-- ..................................................
EV571826       --> AGTTGAGCCAGACAAATTAGATGCAACAGCTTGGTATTGAGGCAAGTCTC
EX892758       --> AGTTGAGCCAGACAAATTAAATGCAACAGCTTGGTATTGAGGCAAGTCTC
FD961135       --> AGTTGAGCCAGACAAATTAGATGCAACAGCTTGGTATTGAGGCAAGTCTC
FD968058       --> AGTTGAGCCAGACAAATTAGATGCAACAGCTTGGTATTGAGGCAAGTCTC
FY443923       --> AGTTGAGCCAGACAAATTAGATGCAACAGCTTGGTATTGAGGCAAGTCTC

               501    -    551
UN26466        --> TTACCTCAATGCAATACTCCAACCAATACGTCTTGGCTGTAAGGATGCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- TTACCTCAATGCAATACTCCAACCAATAGGTCTTGGCTGTAAGGATGCCA  Raphanus raphanistrum subsp. landra
FD972088       <-- T-ACCTCAATGCAATACTCCAACCAATACGTCT-GGCTGTAAGGATGCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FD965372       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV566773       <-- ..................................................  Raphanus raphanistrum subsp. landra
EV571826       --> TTACCTCAATGCAATACTCCAACCAATAGGTCTTGGCTGTAAGGATGCCA  Raphanus raphanistrum subsp. landra
EX892758       --> TTACCTCAATGCAATACTCCAACCAATACGTCTTGGCTGTAAGGATGCCA  Raphanus sativus var. oleiformis
FD961135       --> TTACCTCAATGCAATACTCCAACCAATAGGTCTTGGCTGTAAGGATGCCA  Raphanus raphanistrum subsp. maritimus
FD968058       --> TTACCTCAATGCAATACTCCAACCAATACGTCTTGGCTGTAAGGATGCCA  Raphanus raphanistrum subsp. raphanistrum (MS)
FY443923       --> TTACCTCAATGCAATACTCCAACCAATACGTCTTGGCTGTAAGGATGCCA  Raphanus sativus cv GSK3-1

               551    -    601
UN26466        --> GCAGCGACATGTTCTTCCAATAGTGTACGAAATGCATCACGGTTTTTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- GCAGCGACATGTTCTTCCAATAGTGTACGAAATGCATCACGGTTTTTTCT
FD972088       <-- GCAGCGACATGT-CTTCCAATAGTGTACGAAATGCATCACGATTTTT-CT
FD965372       <-- ..................................................
EV566773       <-- ..................................................
EV571826       --> GCAGCGACATGTTCTTCCAATAGTGTACGAAATGCATCACGGTTTTTTCT
EX892758       --> GCAGCGACATGTTCTTCCAATAGTGTACGAAATGCATCACGGTTTTTTCT
FD961135       --> GCAGCGACATGTTCTTCCAATAGTGTACGAAATGCATCACGGTTTTTTTT
FD968058       --> GCAGCGACATGTTCTTCCAATAGTGTACGAAATGCATCACGATTTTTTCT
FY443923       --> GCAGCGACATGTTCTTCCAATAGTGTACGAAATGCATCACGGTTTTTTCT

               601    -    651
UN26466        --> CTCAGCCCGCCTAACATGTTCTTTCTCTACCCTCTTCAGCTCCTCTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- CTCAGCCCGCCTAACATGTTCTTTCTCTACCCTCTTCAGCTCCTCTTCTT
FD972088       <-- CTCGGCCCGTCTAACATGTTCTTTCTCTACCCTCTTCAGCTCCTCTTCTT
FD965372       <-- ..................................................
EV566773       <-- ..................................................
EV571826       --> CTCAGCCCGCCTAACATGTTCTTTCTCTACCCTCTTCAGCTCCTCTTCTT
EX892758       --> CTCAGCCCGCCTAACATGTTCTTTCTCTACCCTCTTCAGCTCCTCTTCTT
FD961135       --> CTCAGCCCGCCTAACATGTTCTTTCTCTACCCTCTTCAGCTCCTCTTCTT
FD968058       --> CTCGGCCCGTCTAACATGTTCTTTCTCTACCCTCTTCAGCTCCTCTTCTT
FY443923       --> CTCAGCCCGCCTAACATGTTCTTTCTCTACCCTCTTCAGCTCCTCTTCTT

               651    -    701
UN26466        --> CCTTCTCCAGGTCATTAATGTAATCCTCAAAACCAATCAAACGATCTATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- CCTTCTCCAGGTCATTAATGTAATCCTCAAAACCAATCAAACGATCTATC
FD972088       <-- CTTTCTCCAGGTCATTAATGTAATCCTCAAAACCAATCAAACGATCTATC
FD965372       <-- ..................................................
EV566773       <-- ..................................................
EV571826       --> CCTTCTCCAGGTCATTAATGTAATCCTCAAAACCAATCAAACGATCTATC
EX892758       --> CCTTCTCCAGGTCATTAATGTAATCCTCAAAACCAATCAAACGATCTATC
FD961135       --> CCTTCTCCAGGTCATTAATGTAATCCTCAAAACCAATCAAACGATCTATC
FD968058       --> CCTTCTCCAGGTCATTAATGTAATCCTCAAAACCAATCAAACGATCTATC
FY443923       --> CCTTCTCCAGGTCATTAATGTAATCCTCAAAACCAATCAAACGATCTATC

               701    -    751
UN26466        --> TTTTCAAGAGATGCGCTTCTTTCATCATCCTCCAGTCTATCCTGAATTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- TTTTCAAGAGATGCGCTTCTTTCATCATCCTCCAGTCTATCCTGAATTTT
FD972088       <-- TTTTCAAGAGATGCGCTTCTTTCATCATCCTCCAGTCTATCCTGAATTTT
FD965372       <-- .............................................ATTTT
EV566773       <-- ..................................................
EV571826       --> TTTTCAAGAGATGCGCTTCTTTCATCATCCTCCAGTCTATCCTGAATTTT
EX892758       --> TTTTCAAGAGATGCGCTTCTTTCATCATCCTCCAGTCTATCCTGAATTTT
FD961135       --> TTTTCAAGAGATGCGCTTCTTTCATCATCCTCCAGTCTATCCTGAATTTT
FD968058       --> TTTTCAAGAGATGCGCTTCTTTCATCATCCTCCAGTCTATCCTGAATTTT
FY443923       --> TTTTCAAGAGATGCGCTTCTTTCATCATCCTCCAGTCTATCCTGAATTTT

               751    -    801
UN26466        --> GCGCCATTGTGTACTGGCTTTGATATAGTCACAGGTTTCAAGAAACTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- GCGCCATTGTGTACTGGCTTTGATATAGTCACAGGTTTCAAGAAACTTCC
FD972088       <-- GCGTCATTGTGTACTGGCTTTGATATAGTCACAGGTTTCAAGAAACTTCC
FD965372       <-- GCGCCATTGTGTACTGGCTTTGATATAGTCACAGGTTTCAAGAAACTTCC
EV566773       <-- ..................................................
EV571826       --> GCGCCATTGTGTACTGGCTTTGATATAGTCACAGGTTTCAAGAAACTTCC
EX892758       --> GCGCCATTGTGTACTGGCTTTGATATAGTCACAGGTTTCAAGAAACTTCC
FD961135       --> GCGCCATTGTGTACTGGCTTTGATATAGTCACAGGTTTCAAGAAACTTCC
FD968058       --> GCGTCATTGTGTACTGGCTTTGATATAGTCACAGGTTTCAAGAAACTTCC
FY443923       --> GCGCCATTGTGTACTGGCTTTGATATAGTCACAGGTTTCAAGAAACTTCC

               801    -    851
UN26466        --> GATATTCTGCCATCTTCTGCCGATGTTCTGCCACTGCCTTCTCTCTTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- GATATTCTGCCATCTTCTGCCGATGTTCTGCCACTGCCTTCTCTCTTTCC
FD972088       <-- GATATTCTGCCATCTTCTGCCGATGTTCTGCCACTGCCTTCTCTCTTTCC
FD965372       <-- GATATTCTGCCATCTTCTGCCGATGTTCTGCCACTGCCTTCTCTCTTTCC
EV566773       <-- ..................................................
EV571826       --> GATATTCTGCCATCTTCTGCCGATGTTCTGCCACTGCCTTCTCTCTTTCC
EX892758       --> GATATTCTGCCATCTTCTGCCGATGTTCTGCCACTGCCTTCTCTCTTTCC
FD961135       --> GATATTCTGCCATCTTCTGCCGATGTTCTGCCACTGCCTTCTCTCTTTCC
FD968058       --> GATATTCTGCCATCTTCTGCCGATGTTCTGCCACTGCCTTCTCTCTTT..
FY443923       --> GATATTCTGCCATCTTCTGCCGATGTTCTGCCACTGCCTTCTCTCTTTCC

               851    -    901
UN26466        --> TTCCTCTCAAGTTCCACAATATAATTGTCAAAAAGATCTTCACGATCCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- TTCCTCTCAAGTTCCACAATATAATTGTCAAAAAGATCTTCACGATCCCT
FD972088       <-- TTCCTCTCAAGTTCCACAATATAATTGTCAAAAAGATCTTCACGATCCCT
FD965372       <-- TTCCTCTCTAGTTCCACAATATAATTGTCAAAAAGATCTTCACGATCCCT
EV566773       <-- ..................................................
EV571826       --> TTCCTCTCAAGTTCCACAATATAATTGTC.....................
EX892758       --> TTCCTCTCAAGTTCCACAATATAATTGTCAAAAAGATCTTCACGATCCCT
FD961135       --> TTCCTCTCTAGTTCCACAATATAATTGTCAAAAAGATCTTCACGATCCCT
FD968058       --> ..................................................
FY443923       --> TTCCTCTCAAGTTCCACAATATAATTGTCAAAAAGATCTTCACGATCCCT

               901    -    951
UN26466        --> TGGGCGATCAACAGCTTTAAAACGCTCATCATTTTCAAACAAACTCAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- TGGGCGATCAACAGCTTTAAAACGCTCATCATTTTCAAACAAACTCAAAG
FD972088       <-- TGGGCGATCAACAGCTTTAAAACGCTCATCATTTTCAAACAAACTCAAAG
FD965372       <-- TGGGCGATCAACAGCTTTAAAACGCTCATCATTTTCAAACAAACTCAAAG
EV566773       <-- ..........ACAGTTTTAAAACGCTCACCATTT-CAAACAAACTCAAAG
EV571826       --> ..................................................
EX892758       --> TGGGCGATCAACAGCT..................................
FD961135       --> TGGGCGATCAACAGCTTT................................
FD968058       --> ..................................................
FY443923       --> TGGGCGATCAACAGCTTTAAAACGCTCATCATTTTCAAACAAACTCAAAG

               951    -   1001
UN26466        --> CTTTGCTCCATTTCAGGGATGATGATAATTCTTCACACTCCTCTAGCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- CTTTGCTCCATTTCAGGGATGATGATAATTCTTCACACTCCTCTAGCATC
FD972088       <-- CTTTGCTCCATTTCAGGGATGATGATAATTCTTCACACTCCTCTAGCATC
FD965372       <-- CTTTGCTCCATTTCAGGGATGATGATAATTCTTCACACTCCTCTAGCATC
EV566773       <-- CTTTGCTCCATT-CAGGGATGATGATAATTCTTCACACTCCTCTAGCATC
EV571826       --> ..................................................
EX892758       --> ..................................................
FD961135       --> ..................................................
FD968058       --> ..................................................
FY443923       --> CTTTGCTCCATTTCAGGGATGATGATAATTCTTCACACTCCTCTAGCATC

               1001   -   1051
UN26466        --> TTGACAAATTCTTCCCGCGCTTTCTTCTGTCTCCATCGCCTTTCCTCAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- TTGACAAATTCTTCCCGCGCTTTCTTCTGTCTCCATCGCCTTTCCTCAGC
FD972088       <-- TTGACAAATTCTTCCCGCGCTTTCTTCTGTCTCCATCGCCTTTCCTCAGC
FD965372       <-- TTGACAAATTCTTCCCGCGCTTTCTTCTGTCTCCATCGCCTTTCCTCAGC
EV566773       <-- TTGACAAATTCTTCCCGCGCTTTCTTCTGTCTCCATCGCCTTTCCTCAGC
EV571826       --> ..................................................
EX892758       --> ..................................................
FD961135       --> ..................................................
FD968058       --> ..................................................
FY443923       --> TTGACAAATTCTTCCCGCGCTTTCTTCTGT....................

               1051   -   1101
UN26466        --> TTCCACTTTTTTCCTTTGACCGAGATACTCGTTAAAAGCTTGTTTCCGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- TTCCACTTTTTTCCTTTGACCGAGATACTCGTTAAAAGCTTGTTc.....
FD972088       <-- TTCCACTTTTTTCCTTTGACCGAGATACTCGTTAAAAGCTTGTTTCCGCT
FD965372       <-- TTCCACTTTTTTCCTTTGACCGAGATACTCGTTAAAAGCTTGTTTCCGCT
EV566773       <-- TTCCACTTTTTTCCTTTGACCGAGATACTCGTTAAAAGCTTGTTTCCGCT
EV571826       --> ..................................................
EX892758       --> ..................................................
FD961135       --> ..................................................
FD968058       --> ..................................................
FY443923       --> ..................................................

               1101   -   1151
UN26466        --> CACCGAGTGTCCTCAAAGCACCATATCTTTTATCATGAACAATCTCTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- ..................................................
FD972088       <-- CACCGAGTGTCCTCAAAGCACCATATCTTTTATCATGAACAATCTCTTTA
FD965372       <-- CACCGAGTGTCCTCAAAGCACCATATCTTTTATCATGAACAATCTCTTTA
EV566773       <-- CACCGAGTGTCCTCAAAGCACCATATCTTTTATCATGAACAATCTCTTTA
EV571826       --> ..................................................
EX892758       --> ..................................................
FD961135       --> ..................................................
FD968058       --> ..................................................
FY443923       --> ..................................................

               1151   -   1201
UN26466        --> GTTGTCTGTTCCCATGTCCAGTCGGACTGAACATTTACAGATTCCAAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- ..................................................
FD972088       <-- GTTGTCTGTTCCCATGTCCAGTCGGACTGAACATTTACAGATTCCAAAAG
FD965372       <-- GTTGTCTGTTCCCATGTCCAGTCGGACTGAACATTTACAGATTCCAAAAG
EV566773       <-- GTTGTCTGTTCCCATGTCCAGTCGGACTGAACATTTACAGATTCCAAAAG
EV571826       --> ..................................................
EX892758       --> ..................................................
FD961135       --> ..................................................
FD968058       --> ..................................................
FY443923       --> ..................................................

               1201   -   1251
UN26466        --> AGACTTGAAAGCAGCTTTAGCCTCCTGCTTAGTAGCATACATCATGGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- ..................................................
FD972088       <-- AGACTTGAAAGCAGCTTTAGCCTCCTGCTTAGTAGCATACATCATGGGTT
FD965372       <-- AGACTTGAAAGCAGCTTTAGCCTCCTGCTTAGTAGCATACATCATGGGTT
EV566773       <-- AGACTTGAAAGCAGCTTTAGCCTCCTGCTTAGTAGCATACATCATGGGTT
EV571826       --> ..................................................
EX892758       --> ..................................................
FD961135       --> ..................................................
FD968058       --> ..................................................
FY443923       --> ..................................................

               1251   -   1301
UN26466        --> CCTCAACGTTTGATTTGTCACCAGCAGCTGTCATATTGGATTTTCCATTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- ..................................................
FD972088       <-- CCTCAACGTTTGATTTGTCACCAGCAc.......................
FD965372       <-- CCTCAACGTTTGATTTGTCACCAGCAGCTGTCATATTGGATTTTCCATTT
EV566773       <-- CCTCAACGTTTGATTTGTCACCAGCAGCTGTCATATTGGATTTTCCATTC
EV571826       --> ..................................................
EX892758       --> ..................................................
FD961135       --> ..................................................
FD968058       --> ..................................................
FY443923       --> ..................................................

               1301   -   1351
UN26466        --> ACCGACATTTCCTTATTATCAACCTCATTGTTTGGTGCGGGCGCTCCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- ..................................................
FD972088       <-- ..................................................
FD965372       <-- ACCG..............................................
EV566773       <-- ACCGACATTTCCTTATTATCAACCTCATTGTTTGGTGCGGGCGCTCCATC
EV571826       --> ..................................................
EX892758       --> ..................................................
FD961135       --> ..................................................
FD968058       --> ..................................................
FY443923       --> ..................................................

               1351   -   1401
UN26466        --> CTTCGATTCATATGCCCCCTGAGACGGTAAATTATCCATTTTCATTGCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- ..................................................
FD972088       <-- ..................................................
FD965372       <-- ..................................................
EV566773       <-- CTTCGATTCATATGCCCCCTGAGACGGTAAATTATCCATTTTCATTGCAG
EV571826       --> ..................................................
EX892758       --> ..................................................
FD961135       --> ..................................................
FD968058       --> ..................................................
FY443923       --> ..................................................

               1401   -   1451
UN26466        --> TAGCCTCAGTATCACTAGTTGCAGCTGACTTTGGAGTAACAGGAGTAGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- ..................................................
FD972088       <-- ..................................................
FD965372       <-- ..................................................
EV566773       <-- TAGCCTCAGTATCACTAGTTGCAGCTGACTTTGGAGTAACAGGAGTAGCA
EV571826       --> ..................................................
EX892758       --> ..................................................
FD961135       --> ..................................................
FD968058       --> ..................................................
FY443923       --> ..................................................

               1451   -   1501
UN26466        --> GGGGGAGGACGGGTGACAGGTACAGCCAAACCCGCTGGAATAGGACTTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- ..................................................
FD972088       <-- ..................................................
FD965372       <-- ..................................................
EV566773       <-- GGGGGAGGACGGGTGACAGGTACAGCCAAACCCGCTGGAATAGGACTTGA
EV571826       --> ..................................................
EX892758       --> ..................................................
FD961135       --> ..................................................
FD968058       --> ..................................................
FY443923       --> ..................................................

               1501   -   1551
UN26466        --> AGAATGCGCAGGAATTATTGGAGATGTGCTGGGAACAACTGCGGTCACAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- ..................................................
FD972088       <-- ..................................................
FD965372       <-- ..................................................
EV566773       <-- AGAATGCGCAGGAATTATTGGAGATGTGCTGGGAACAACTGCGGTCACAG
EV571826       --> ..................................................
EX892758       --> ..................................................
FD961135       --> ..................................................
FD968058       --> ..................................................
FY443923       --> ..................................................

               1551   -   1601
UN26466        --> GAGTGCTAACAGCTAGATCAGATGAGGATGCAGCAATGTGGGATAGAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- ..................................................
FD972088       <-- ..................................................
FD965372       <-- ..................................................
EV566773       <-- GAGTGCTAACAGCTAGATCAGATGAGGATGCAGCAATGTGGGATAGAGAG
EV571826       --> ..................................................
EX892758       --> ..................................................
FD961135       --> ..................................................
FD968058       --> ..................................................
FY443923       --> ..................................................

               1601   -   1651
UN26466        --> GTCGATCCAGGTTCGGAATGGGACCTCTTTGCACTAGCTAATTCGGCTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- ..................................................
FD972088       <-- ..................................................
FD965372       <-- ..................................................
EV566773       <-- GTCGATCCAGGTTCGGAATGGGACCTCTTTGCACTAGCTAATTCGGCTTG
EV571826       --> ..................................................
EX892758       --> ..................................................
FD961135       --> ..................................................
FD968058       --> ..................................................
FY443923       --> ..................................................

               1651   -   1701
UN26466        --> TTCCCGAGCTAACTTTAAATCTTCCGGAATTGTCCACTTAGACTCCTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- ..................................................
FD972088       <-- ..................................................
FD965372       <-- ..................................................
EV566773       <-- TTCCCGAGCTAACTTTAAATCTTCCGGAATTGTCCACTTAGACTCCTTTG
EV571826       --> ..................................................
EX892758       --> ..................................................
FD961135       --> ..................................................
FD968058       --> ..................................................
FY443923       --> ..................................................

               1701   -   1751
UN26466        --> TAACCTTGTTATAATAATATTTCCTTCCTTCAGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX772342       <-- ....................................
FD972088       <-- ....................................
FD965372       <-- ....................................
EV566773       <-- TAACCTTGTTATAATAATATTTCCTTCCTTCAGCTC
EV571826       --> ....................................
EX892758       --> ....................................
FD961135       --> ....................................
FD968058       --> ....................................
FY443923       --> ....................................