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Alignment for radish unigene UN39085

               1      -     51
UN39085        --> GGATTTTCTTACGGGACCCTTTTCTTAGGAGAGGAGAAGTTCGTGGAAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY927839       <-- ..................................................
FD943286       <-- ..................................................
EY943647       <-- ..................................................
FD951019       <-- ..................................................
EY931100       --> GGATTTTCTTACGGGACCCTTTTCTTACCAGAGGAGAAGTTCGTGGAAAC
EY932023       --> ..........ACGGGACCCTTTTCTTACCAGAGGAGAAGTTCGTGGAAAC
FD569580       --> ...........................GGAGAGGAGAAGTTCGTGGAAAC
FD947311       --> ...........................GGAGAGGAGAAGTTCGTGGAAAC
FD954855       --> ...........................GGAGAGGAGAAGTTCGTGGAAAC
EX897513       --> ............................ggGAGGAGAAGTTCGTGGAAAC
FY433640       --> ..................................................

               51     -    101
UN39085        --> GGCACTGACGAACGAGATCTAGCACTTTCACGGATCGATCGAAGAAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY927839       <-- ..................................................
FD943286       <-- ..................................................
EY943647       <-- ..................................................
FD951019       <-- ..................................................
EY931100       --> GGCACTGACGAACGAGATCTAGCACTTTCACGGATCGATCGAAGAAGAAG
EY932023       --> GGCACTGACGAACGAGATCTAGCACTTTCACGGATCGATCGAAGAAGAAG
FD569580       --> GGCACTGACGAACGAGATCTAGCACTTTCACGGATCGATCGAAGAAGAAG
FD947311       --> GGCACTGACGAACGAGATCTAGCACTTTCACGGATCGATCGAAGAAGAAG
FD954855       --> GGCACTGACGAACGAGATCTAGCACTTTCACGGATCGATCGAAGAAGAAG
EX897513       --> GGCACTGACGAACGAGATCTAGCACTTTCACGGATCGATCGAAGAAGAAG
FY433640       --> ......................CACTTTC-CGGATCGATCGAAGAAGAAG

               101    -    151
UN39085        --> AAAGATGAACATTTTCAGATTAGCAGGTGATATGACTCACCTGGCCAGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY927839       <-- ..................................................
FD943286       <-- ..................................................
EY943647       <-- ..................................................
FD951019       <-- ..................................................
EY931100       --> AAAGATGAACATTTTCAGATTAGCAGGTGATATGACTCACCTGGCCAGTG
EY932023       --> AAAGATGAACATTTTCAGATTAGCAGGTGATATGACTCACCTGGCCAGTG
FD569580       --> AAAGATGAACATTTTCAGATTAGCAGGTGATATGACTCACCTGGCCAGTG
FD947311       --> AAAGATGAACATTTTCAGATTAGCAGGTGATATGACTCACCTGGCCAGTG
FD954855       --> AAAGATGAACATTTTCAGATTAGCAGGTGATATGACTCACCTGGCCAGTG
EX897513       --> AAAGATGAACATTTTCAGATTAGCAGGTGATATGACTCACCTGGCCAGTG
FY433640       --> AAAGATGAACATTTTCAGATTAGCAGGTGATATGACTCACCTGGCCAGTG

               151    -    201
UN39085        --> TCCTCGTCTTGCTCCTCAAGATCCACACCATCAAATCCTGCGCTGGTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY927839       <-- ..................................................
FD943286       <-- ..................................................
EY943647       <-- ..................................................
FD951019       <-- ..................................................
EY931100       --> TCCTCGTCTTGCTCCTCAAGATCCACACCATCAAATCCTGCGCTGGTGTG
EY932023       --> TCCTCGTCTTGCTCCTCAAGATCCACACCATCAAATCCTGCGCTGGTGTG
FD569580       --> TCCTCGTCTTGCTCCTCAAGATCCACACCATCAAATCCTGCGCTGGTGTG
FD947311       --> TCCTCGTCTTGCTCCTCAAGATCCACACCATCAAATCCTGCGCTGGTGTG
FD954855       --> TCCTCGTCTTGCTCCTCAAGATCCACACCATCAAATCCTGCGCTGGTGTG
EX897513       --> TCCTCGTCTTGCTCCTCAAGATCCACACCATCAAATCCTGCGCTGGTGTG
FY433640       --> TCCTCGTCTTGCTCCTCAAGATCCACACCATCAAATCCTGCGCTGGTGTG

               201    -    251
UN39085        --> TCATTGAAGACTCAAGAGCTCTACGCCATTGTATTCGCGACGCGTTATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY927839       <-- ..................................................
FD943286       <-- ..................................................
EY943647       <-- ..................................................
FD951019       <-- ..................................................
EY931100       --> TCATTGAAGACTCAAGAGCTCTACGCCATTGTATTCGCGACGCGTTATCT
EY932023       --> TCATTGAAGACTCAAGAGCTCTACGCCATTGTATTCGCGACGCGTTATCT
FD569580       --> TCATTGAAGACTCAAGAGCTCTACGCCATTGTATTCGCGACGCGTTATCT
FD947311       --> TCATTGAAGACTCAAGAGCTCTACGCCATTGTATTCGCGACGCGTTATCT
FD954855       --> TCATTGAAGACTCAAGAGCTCTACGCCATTGTATTCGCGACGCGTTATCT
EX897513       --> TCATTGAAGACTCAAGAGCTCTACGCCATTGTATTCGCGACGCGTTATCT
FY433640       --> TCATTGAAGACTCAAGAGCTCTACGCCATTGTATTCGCGACGCGTTATCT

               251    -    301
UN39085        --> GGATATTTTCACGAGCTTTGTCTCCGTCTACAACACCTTCATGAAGTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY927839       <-- .........................................TGAAGTTGG
FD943286       <-- ..................................................
EY943647       <-- ..................................................
FD951019       <-- ..................................................
EY931100       --> GGATATTTTCACGAGCTTTGTCTCCGTCTACAACACCTTCATGAAGTTGG
EY932023       --> GGATATTTTCACGAGCTTTGTCTCCGTCTACAACACCTTCATGAAGTTGG
FD569580       --> GGATATTTTCACGAGCTTTGTCTCCGTCTACAACACCTTCATGAAGTTGG
FD947311       --> GGATATTTTCACGAGCTTTGTCTCCGTCTACAACACCTTCATGAAGTTGG
FD954855       --> GGATATTTTCACGAGCTTTGTCTCCGTCTACAACACCTTCATGAAGTTGG
EX897513       --> GGATATTTTCACGAGCTTTGTCTCCGTCTACAACACCTTCATGAAGTTGG
FY433640       --> GGATATTTTCACGAGCTTTGTCTCCGTCTACAACACCTTCATGAAGTTGG

               301    -    351
UN39085        --> TCTTCTTAGGAAGCTCCTTCTCCATTGTTTGGTACATGAGGTATCACAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY927839       <-- TCTTCTTAGGAAGCTCCTTCTCCATTGTTTGGTACATGAGGTATCACAAG
FD943286       <-- ..TTCTTAGGAAGCTCCTTCTCCATTGTTTGGTACATGAGGTATCACAAG
EY943647       <-- ....................TCCATTGTTTGGTACATGAGGTATCACAAG
FD951019       <-- ..................................................
EY931100       --> TCTTCTTAGGAAGCTCCTTCTCCATTGTTTGGTACATGAGGTATCACAAG
EY932023       --> TCTTCTTAGGAAGCTCCTTCTCCATTGTTTGGTACATGAGGTATCACAAG
FD569580       --> TCTTCTTAGGAAGCTCCTTCTCCATTGTTTGGTACATGAGGTATCACAAG
FD947311       --> TCTTCTTAGGAAGCTCCTTCTCCATTGTTTGGTACATGAGGTATCACAAG
FD954855       --> TCTTCTTAGGAAGCTCCTTCTCCATTGTTTGGTACATGAGGTATCACAAG
EX897513       --> TCTTCTTAGGAAGCTCCTTCTCCATTGTTTGGTACATGAGGTATCACAAG
FY433640       --> TCTTCTTAGGAAGCTCCTTCTCCATTGTTTGGTACATGAGGTATCACAAG

               351    -    401
UN39085        --> GCCGTCCAAAGGACTTACGACAGGGAGCAAGATACCTTTCGTCATTGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY927839       <-- GCCGTCCAAAGGACTTACGACAGGGAGCAAGATACCTTTCGTCATTGGTT
FD943286       <-- GCCGTCCAAAGGACTTACGACAGGGAGCAAGATACCTTTCGTCATTGGTT
EY943647       <-- GCCGTCCAAAGGACTTACGACAGGGAGCAAGATACCTCTCGTCATTGGTT
FD951019       <-- ..................................................
EY931100       --> GCCGTCCAAAGGACTTACGACAGGGAGCAAGATACCTTTCGTCATTGGTT
EY932023       --> GCCGTCCAAAGGACTTACGACAGGGAGCAAGATACCTTTCGTCATTGGTT
FD569580       --> GCCGTCCAAAGGACTTACGACAGGGAGCAAGATACCTTTCGTCATTGGTT
FD947311       --> GCCGTCCAAAGGACTTACGACAGGGAGCAAGATACCTTTCGTCATTGGTT
FD954855       --> GCCGTCCAAAGGACTTACGACAGGGAGCAAGATACCTTTCGTCATTGGTT
EX897513       --> GCCGTCCAAAGGACTTACGACAGGGAGCAAGATACCTTTCGTCATTGGTT
FY433640       --> GCCGTCCAAAGGACTTACGACAGGGAGCAAGATACCTTTCGTCATTGGTT

               401    -    451
UN39085        --> CCTTGTCCTTCCTTGCCTTCTCTTGGCTCTTCTCATTCACGAAAAGTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY927839       <-- CCTTGTCCTTCCCTGCCTTCTCTTGGCTCTTCTCATTCACGAAAAGTTCA  Raphanus sativus var. oleiformis
FD943286       <-- CCTTGTCCTTCCTTGCCTTCTCTTGGCTCTTCTCATTCACGAAAAGTTCA  Raphanus sativus cv Early Scarlet Globe
EY943647       <-- CCCTGTCCTTCCTTGCCTTCTCTTGGCTCTTCTCATTCACGAAAAGTTCA  Raphanus sativus cv Rat-Tail Radish #3870
FD951019       <-- .................TTCTCTTGGCTCTTCTCATTCACGAAAAGTTCA  Raphanus sativus cv Rat-Tail Radish #3870
EY931100       --> CCTTGTCCTTCCCTGCCTTCTCTTGGCTCTTCTCATTCACGAAAAGTTCA  Raphanus sativus var. oleiformis
EY932023       --> CCTTGTCCTTCCCTGCCTTCTCTTGGCTCTTCTCATTCACGAAAAGTTCA  Raphanus sativus var. oleiformis
FD569580       --> CCTTGTCCTTCCTTGCCTTCTCTTGGCTCTTCTCATTCACGAAAAGTTCA  Raphanus sativus cv Early Scarlet Globe
FD947311       --> CCTTGTCCTTCCTTGCCTTCTCTTGGCTCTTCTCATTCACGAAAAGTTCA  Raphanus sativus cv Early Scarlet Globe
FD954855       --> CCTTGTCCTTCCTTGCCTTCTCTTGGCTCTTCTCATTCACGAAAAGTTCA  Raphanus sativus cv Rat-Tail Radish #3870
EX897513       --> CCTTGTCCTTCCTTGCCTTCTCTTGGCTCTTCTCATTCACGAAAAGTTCA  Raphanus sativus cv Early Scarlet Globe
FY433640       --> CCTTGTCCTTCCCTGCCTTCTCTTGGCTCTTCTCATTCACGAAAAGTTCA  Raphanus sativus cv GSK3-1

               451    -    501
UN39085        --> CCTTTCTTGAGGTACTGTGGACGTTTTCGTTGTACTTGGAGGCTGTTGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY927839       <-- CCTTTCTTGAGGTACTGTGGACGTTTTCGTTGTACTTGGAGGTTGTTGCT
FD943286       <-- CCTTTCTTGAGGTAC-GTGGACGTTTTCGTTGTACTTGGAGGCTGTTGCT
EY943647       <-- CCTTTCTCGAGGTACTGTGGACGTTTTCGTTGTACTTGGAGGCTGTTGCT
FD951019       <-- CCTTTCTTGAGGTACTGTGGACGTTTTCGTTGTACTTGGAGGCTGTTGCT
EY931100       --> CCTTTCTTGAGGTACTGTGGACGTTTTCGTTGTACTTGGAGGCTGTTGCT
EY932023       --> CCTTTCTTGAGGTACTGTGGACGTTTTCGTTGTACTTGGAGGTTGTTGCT
FD569580       --> CCTTTCTTGAGGTACTGTGGACGTTTTCGTTGTACTTGGAGGCTGTTGCT
FD947311       --> CCTTTCTTGAGGTAC-GTGGACGTTTTCGTTGTACTTGGAGGCTGTTGCT
FD954855       --> CCTTTCTTGAGGTACTGTGGACGTTTTCGTTGTACTTGGAGGCTGTTGCT
EX897513       --> CCTTTCTTGAGGTACTGTGGACGTTTTCGTTGTACTTGGAGGCTGTTGCT
FY433640       --> CCTTTCTTGAGGTACTGTGGACGTTTTCGTTGTACTTGGAGGCTGTTGCT

               501    -    551
UN39085        --> ATATTACCTCAGCTTGTCTTGCTTCAAAGGACTAGAAATATCGATAACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY927839       <-- ATATTACCTCAGCTTGTCTTGCTTCAAAGGACTAGAAATATCGATAACTT
FD943286       <-- ATATTACCTCAGCTTGTCTTGCTTCAAAGGACTAGAAATATCGATAACTT
EY943647       <-- ATATTACCTCAGCTTGTCTTGCTTCAAAGGACTAGAAATATCGATAACTT
FD951019       <-- ATATTACCTCAGCTTGTCTTGCTTCAAAGGACTAGAAATATCGATAACTT
EY931100       --> ATATTACCTCAGCTTGTCTTGCTTCAAAGGACTAGAAATATCGATAACTT
EY932023       --> ATATTACCTCAGCTTGTCTTGCTTCAAAGGACTAGAAATATCGATAACTT
FD569580       --> ATATTACCTCAGCTTGTCTTGCTTCAAAGGACTAGAAATATCGATAACTT
FD947311       --> ATATTACCTCAGCTTGTCTTGCTTCAAAGGACTAGAAATATCGATAACTT
FD954855       --> ATATTACCTCAGCTTGTCTTGCTTCAAAGGACTAGAAATATCGATAACTT
EX897513       --> ATATTACCTCAGCTTGTCTTGCTTCAAAGGACTAGAAATATCGATAACTT
FY433640       --> ATATTACCTCAGCTTGTCTTGCTTCAAAGGACTAGAAATATCGATAACTT

               551    -    601
UN39085        --> GACCGGCCAATACATATTCCTCCTTGGTGGGTACAGGGG-ATTGTACATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY927839       <-- GACCGGCCAATACATATTCCTCCTTGGTGGGTACAGGGG-ATTGTACATC
FD943286       <-- GACCGGCCAATACATATTCCTCCTTGGTGGGTACAGGGG-ATTGTACATC
EY943647       <-- GACCGGCCAATACATATCCCTCCTTGGTGGGTACAGGGG-ATTGTACATC
FD951019       <-- GACCGGCCAATACATATTCCTCCTTGGTGGGTACAGGGG-ATTGTACATC
EY931100       --> GACCGGCCAATACATATTCCTCCTTGGTGGGTACAGGGG-ATTGTACATC
EY932023       --> GACCGGCCAATACATATTCCTCCTTGGTGGGTACAGGGG-ATTGTACATC
FD569580       --> GACCGGCCAATACATATTCCTCCTTGGTGGGTACAGGGG-ATTGTACATC
FD947311       --> GACCGGCCAATACATATTCCTCCTTGGTGGGTACAGGGGGATTGTACATC
FD954855       --> GACCGGCCAATACATATTCCTCCTTGGTGGGTACAGGGG-ATTGTACATC
EX897513       --> GACCGGCCAATACATATTCCTCCTTGGTGGGTACAGGGG-ATTGTACATC
FY433640       --> GACCGGCCAATACATATTCCTCCTTGGTGGGTACAGGGG-ATTGTACATC

               601    -    651
UN39085        --> TTAAACTGGATCTACCGTTACTTCACTGAGCCACACTTCGTTCACTGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY927839       <-- TTAAACTGGATCTACCGTTACTTCACTGAGCCACACTTCGTTCACTGGAT
FD943286       <-- TTAAACTGGATCTACCGTTACTTCACTGAGCCACACTTCGTTCACTGGAT
EY943647       <-- TTAAACTGGATCTACCGTTACTTCACTGAGCCACACTTCGTTCACTGGAT
FD951019       <-- TTAAACTGGATCTACCGTTACTTCACTGAGCCACACTTCGTTCACTGGAT
EY931100       --> TTAAACTGGATCTACCGTTACTTCACTGAGCCACACTTCGTTCACTGGAT
EY932023       --> TTAAACTGGATCTACCGTTACTTCACTGAGCCACACTTCGTTCACTGGAT
FD569580       --> TTAAACTGGATCTACCGTTACTTCACTGAGCCACACTTCGTTCACTGG..
FD947311       --> TTAAACTGGATCTACCGTTACTTCACTGAGCCACACTTCGTTCACTGGAT
FD954855       --> TTAAACTGGATCTACCGTTACTTCACTGAGCCACACTTCGTTCACTGGAT
EX897513       --> TTAAACTGGATCTACCGTTACTTCACTGAGCCACACTTCGTTCACTGGAT
FY433640       --> TTAAACTGGATCTACCGTTACTTCACTGAGCCACACTTCGTTCACTGGAT

               651    -    701
UN39085        --> AACATGGATCGCGGGGTTTGTTCAGACATTGCTCTATGCCGACTTCTTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY927839       <-- AACATGGATCGCGGGGTTTGTTCAGACATTGCTCTATGCCGACTTCTTCT
FD943286       <-- AACATGGATCGCGGGGTTTGTTCAGACATTGCTTTATGCCGACTTCTTCT
EY943647       <-- AACATGGATCGCGGGGTTTGTTCAGACATTGCTCTATGCCGACTTCTTCT
FD951019       <-- AACATGGATCGCGGGGTTTGTTCAGACATTGCTCTATGCCGACTTCTTCT
EY931100       --> AACATGGATCGCGGGGTTTGTTCAGACATTGCTCTAT.............
EY932023       --> AACATGGATCGCGGGGTTTGTTCAGACATTGCTCTATGCCGACTTCTTCT
FD569580       --> ..................................................
FD947311       --> AACATGGATCGCGGGGTTTGTTCAGACATTGCTCTATGCCGACTTCTTCT
FD954855       --> AACATGGATCGCGGGGTTTGTTCAGACATTGCTCTATGCCGACTTCTTCT
EX897513       --> AACATGGATCGCGGGGTTTGTTCAGACATTGCTCTATGCCGACTTCTTCT
FY433640       --> AACATGGATCGCGGGGTTTGTTCAGACATTGCTCTATGCCGACTTCTTCT

               701    -    751
UN39085        --> ATTATTATTTCCTAAGCTGGAAGAACAACAAAAAGCTCCAGTTGCCAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY927839       <-- ATTATTATTTCCTAAGCTGGAAGAACAACAAAAAGCTCCAGTTGCCAGCT
FD943286       <-- ATTATTATTTCCTAAGCTGGAAGAACAACAAAAAGCTCCAGTTGCCAGCT
EY943647       <-- ATTATTATTTCCTAAGCTGGAAGAACAACAAAAAGCTCCAGTTGCCAGCT
FD951019       <-- ATTATTATTTCCTAAGCTGGAAGAACAACAAAAAGCTCCAGTTGCCAGCT
EY931100       --> ..................................................
EY932023       --> ATTATTATTTCCTAAGCTGG..............................
FD569580       --> ..................................................
FD947311       --> ATTATTATTTCCTAAGCTGGAg............................
FD954855       --> ATTATTATTTCCTAAGCTGGAAGA-CAACAAAAAGCTCCAGTTGCCAGCT
EX897513       --> ATTATTATTTCCTAAGCTGGAgacacaaaagctcagtgcagctaatctct
FY433640       --> ATTATTATTTCCTAAGCTGGAAGAACAACAAAAAGCTCCAGTTGCCAGCT

               751    -    801
UN39085        --> TAATCTCTGGATTTTCGATGCTCGGAAACCCTACCGATTCAGTTTGGTGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY927839       <-- TAATCTCTGGATTTTCGATGCTCGGAAACCCTACCGATTCAGTTTGGTGC
FD943286       <-- TAATTTCTGGATTTTCGATGCTCGGAAACCCTACCGATTCAGTTTGGTGC
EY943647       <-- TAATCTCTGGATTTTCGATGCTCGGAAACCCTACCGATTCAGTTTGGTGC
FD951019       <-- TAATCTCTGGATTTTCGATGCTCGGAAACCCTACCGATTCAGTTTGGTGC
EY931100       --> ..................................................
EY932023       --> ..................................................
FD569580       --> ..................................................
FD947311       --> ..................................................
FD954855       --> TAATCTCTGGATTT-CGATGCTCGGAAACC-TACCGATTCAGTT......
EX897513       --> ..................................................
FY433640       --> TAATCTCTGGATTTTCGATGCTCGGAAACCCTACCGATTCAGTTTGGTGC

               801    -    851
UN39085        --> CTGGATACAATATCTGCTGGAAAGTTTACCAGTTTACTCTGTTGTTAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY927839       <-- CTGGATACAATATCTGCTGGAAAGTTTACCAGTTTACTCTGTTGTTAGTT
FD943286       <-- CTGGATACAATATCTGCTGGAAAGTTTACCAGTTTACTCTGTTGTTAGTT
EY943647       <-- CTGGATACAATATCTGCTGGAAAGTTTACCAGTTTACTCTGTTGTTAGTT
FD951019       <-- CTGGATACAATATCTGCTGGAAAGTTTACCAGTTTACTCTGTTGTTAGTT
EY931100       --> ..................................................
EY932023       --> ..................................................
FD569580       --> ..................................................
FD947311       --> ..................................................
FD954855       --> ..................................................
EX897513       --> ..................................................
FY433640       --> CTGGATACAATATCTGCTGGAAAGTTTACCAGTTTACTCTGTTGTTAGTT

               851    -    901
UN39085        --> AATGGAGGAGACGAGCATAGATTTTATGTAAACTCCAGAAATTTAACTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY927839       <-- AATGGAGGAGACGAGCATAGATTTTATGTAAACTCCAGAAATTTAACTTG
FD943286       <-- AATGGAGGAGACGAGCATAGATTTTATGTAAACTCCAGAAATTTAACTTG
EY943647       <-- AATGGAGGAGACGAGCATAGATTTTATGTAAACTCCAGAAATTTAACTTG
FD951019       <-- AATGGAGGAGACGAGCATAGATTTTATGTAAACTCCAGAAATTTAACTTG
EY931100       --> ..................................................
EY932023       --> ..................................................
FD569580       --> ..................................................
FD947311       --> ..................................................
FD954855       --> ..................................................
EX897513       --> ..................................................
FY433640       --> AATGGAGGAGACGAGCATAGATTTTATGTAAACTCCAGAAATTTAACTTG

               901    -    951
UN39085        --> TTGTTACACATTTTT-GAACTTTTTCGTGTCTCAGCTTTTTGTTCGAGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY927839       <-- TTGTTACACATTTTT-GAACTTTTTCGTGTCTCAGCTTTTTGTTCGAGTA
FD943286       <-- TTGTTACAC.........................................
EY943647       <-- TTGTTACACATTTTT-GAACTTTTTCGTGTCTCAGCTTTTTGTTCGAGTA
FD951019       <-- TTGTTACAC.........................................
EY931100       --> ..................................................
EY932023       --> ..................................................
FD569580       --> ..................................................
FD947311       --> ..................................................
FD954855       --> ..................................................
EX897513       --> ..................................................
FY433640       --> TTGTTACACATTTTTTGAACTTTTTCGTGTCTC.................

               951    -   1001
UN39085        --> AGTGTTACTAAAATATTCCGACTGGACAAATCTTGCAAGTATGACTAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY927839       <-- AGTGTTACT.........................................
FD943286       <-- ..................................................
EY943647       <-- AGTGTTACTAAAATATTCCGACTGGACAAATCTTGCAAGTATGACTAGTC
FD951019       <-- ..................................................
EY931100       --> ..................................................
EY932023       --> ..................................................
FD569580       --> ..................................................
FD947311       --> ..................................................
FD954855       --> ..................................................
EX897513       --> ..................................................
FY433640       --> ..................................................

               1001   -   1051
UN39085        --> TACGTTTCCC
                   ~~~~~~~~~~
EY927839       <-- ..........
FD943286       <-- ..........
EY943647       <-- TACGTTTCCC
FD951019       <-- ..........
EY931100       --> ..........
EY932023       --> ..........
FD569580       --> ..........
FD947311       --> ..........
FD954855       --> ..........
EX897513       --> ..........
FY433640       --> ..........