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Alignment for radish unigene UN39102

               1      -     51
UN39102        --> GGGCTGCTTAATAATATTTCGCGGAAGAAGGAAGGAAGACCAGAGAAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761735       <-- ..................................................
EY936315       <-- ..................................................
FD977776       <-- ..................................................
FD985624       <-- ..................................................
FD944595       <-- ..................................................
FD961653       <-- ..................................................
FD562387       --> GGGCTGCTTAATAATATTTCGCGGAAGAAGGAAGGAAGACCAGAGAAAGT
FD982157       --> .......................GAAGAAGGAAGGAAGACCAGAGAAAGT
EY913637       --> ..................................................
EY907378       --> ..................................................
FD989901       --> ..................................................
FD948869       --> ..................................................
FY449190       --> ..................................................
FY452372       --> ..................................................

               51     -    101
UN39102        --> CCTCTCTTTCGAAGATTCCAAATTTTAATCGAAATCCAGATTTTTCCCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761735       <-- ..................................................
EY936315       <-- ..................................................
FD977776       <-- ..................................................
FD985624       <-- ..................................................
FD944595       <-- ..................................................
FD961653       <-- ..................................................
FD562387       --> CCTCTCTTTCGAAGATTCCAAATTTTAATCGAAATCCAGATTTTTCCCCA
FD982157       --> CCTCTCTTTCGAAGATTCCAAATTTTAATCGAAATCCAGATTTTTCCCCA
EY913637       --> ........ggGAAGATTCCAAATTTTAATCGAAATCCAGATTTTTCCCCA
EY907378       --> ..................................................
FD989901       --> ..................................................
FD948869       --> ..................................................
FY449190       --> ..................................................
FY452372       --> ..................................................

               101    -    151
UN39102        --> GGGATCTAGCAATCGATTTGGGTAGAAGAGGGTGAAATTAAGGAAGAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761735       <-- ..................................................
EY936315       <-- ..................................................
FD977776       <-- ..................................................
FD985624       <-- ..................................................
FD944595       <-- ..................................................
FD961653       <-- ..................................................
FD562387       --> GGGATCTAGCAATCGATTTGGGTAGAAGAGGGTGAAATTAAGGAAGAAGG
FD982157       --> GGGATCTAGCAATCGATTTGGGTAGAAGAGGGTGAAATTAAGGAAGAAGG
EY913637       --> GGGATCTAGCAATCGATTTGGGTAGAAGAGGGTGAAATTAAGGAAGAAGG
EY907378       --> ............................gGGGTGAAATAAAGGAAGAAGG
FD989901       --> ..................................................
FD948869       --> ..................................................
FY449190       --> ..................................................
FY452372       --> ..................................................

               151    -    201
UN39102        --> AAAAAGATGATGAATCGGCTATTTGGGAAACCAAAGCATGAGGGTAATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761735       <-- ..................................................
EY936315       <-- ..................................................
FD977776       <-- ..................................................
FD985624       <-- ..................................................
FD944595       <-- ..................................................
FD961653       <-- ..................................................
FD562387       --> AAAAAGATGATGAATCGGCTATTTGGGAAACCAAAGCATGAGGGTAATGC
FD982157       --> AAAAAGATGATGAATCGGCTATTTGGGAAACCAAAGCATGAGGGTAATGC
EY913637       --> AAAAAGATGATGAATCGGCTATTTGGGAAACCAAAGCATGAGGGTAATGC
EY907378       --> AAAAAGATGATGAATCGGCTATTTGGGAAACCAAAGCATGAGGGTAATGC
FD989901       --> ..................................................
FD948869       --> ..................................................
FY449190       --> ..................................................
FY452372       --> ..................................................

               201    -    251
UN39102        --> TCTCCAGACATTAGACAAGCTCAACGAGACGCTTGAGATGCTAGAGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761735       <-- ..............ACAAGCTCAACGAGACGCTTGAGATGCTAGAGAAGA
EY936315       <-- ..................................................
FD977776       <-- ..................................................
FD985624       <-- ..................................................
FD944595       <-- ..................................................
FD961653       <-- ..................................................
FD562387       --> TCTCCAGACATCAGACAAGCTCAACGAGACGCTTGAGATGCTAGAGAACA
FD982157       --> TCTCCAGACATTAGACAAGCTCAACGAGACGCTTGAGATGCTAGAGAAGA
EY913637       --> TCTCCAGACATTAGACAAGCTCAACGAGACGCTTGAGATGCTAGAGAAGA
EY907378       --> TCTCCAGACATTAGACAAGCTCAACGAGACACTTGAGATGCTAGAGAAGA
FD989901       --> ..................................................
FD948869       --> ..................................................
FY449190       --> ..................................................
FY452372       --> ..................................................

               251    -    301
UN39102        --> AGGAGAAAGTGCTGTTAAAGAAAGCTGGACAAGAGGTCGAGAAAGCCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761735       <-- AGGAGAAAGTGCTGTTAAAGAAAGCTGGACAAGAGGTCGGGAAAGCCAAA
EY936315       <-- ..................................................
FD977776       <-- ..................................................
FD985624       <-- ..................................................
FD944595       <-- ..................................................
FD961653       <-- ..................................................
FD562387       --> AGGAGAAAGTGCTGTTAAAGAAAGCTGGACAAGAGGTCGAGAAAGCCAAA
FD982157       --> AGGAGAAAGTGCTGTTAAAGAAAGCTGGACAAGAGGTCGAGAAAGCCAAA
EY913637       --> AGGAGAAAGTGCTGTTAAAGAAAGCTGGACAAGAGGTCGAGAAAGCCAAA
EY907378       --> AGGAGAAAGTGCTCTTAAAGAAAGCTGGACAAGAGGTCGAGAAAGCCAAA
FD989901       --> ..................................................
FD948869       --> ..................................................
FY449190       --> ..................................................
FY452372       --> ..................................................

               301    -    351
UN39102        --> GAATACACTCGTTCTAAAAACAAACGCGCGGCTATTCAGTGCTTGAAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761735       <-- GAATACACTCGTTCTAAAAACAAACGCGCGGCTATTCAGTGCTTGAAGAG
EY936315       <-- ...............AAAAACAAACGCGCGGCTATTCAGTGCTTGAAAAG
FD977776       <-- ..................................................
FD985624       <-- ..................................................
FD944595       <-- ..................................................
FD961653       <-- ..................................................
FD562387       --> GAATACACTCGTTCTAAAAACAAACGCGCGGCTATTCAGTGCTTGAAAAG
FD982157       --> GAATACACTCGTTCTAAAAACAAACGCGCGGCTATTCAGTGCTTGAAAAG
EY913637       --> GAATACACTCGTTCTAAAAACAAACGCGCGGCTATTCAGTGCTTGAAAAG
EY907378       --> GAATACACTCGTTCCAAAAACAAACGCGCGGCTATTCAGTGCTTGAAAAG
FD989901       --> ..................................................
FD948869       --> ..................................................
FY449190       --> ..................................................
FY452372       --> ..................................................

               351    -    401
UN39102        --> GAAGAGGTTGTATGAGCAACAAGTTGAACAGCTTGGCAACTTCCAGCTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761735       <-- GAAGAGGTTGTATGAGCAACAAGTTGAACAGCTTGGCAACTTCCAGCTCC
EY936315       <-- GAAGAGGTTGTATGAGCAACAAGTTGAACAGCTTGGCAACTTCCAGCTCC
FD977776       <-- ....AGGTTGTATGAGCAACAAGTTGAACAGCTTGGCAACTTCCGGCTCC
FD985624       <-- ..................................................
FD944595       <-- ..................................................
FD961653       <-- ..................................................
FD562387       --> GAAGAGGTTGTATGAGCAACAAGTTGAACAGCTTGGCAACTTCCAGCTCC
FD982157       --> GAAGAGGTTGTATGAGCAACAAGTTGAACAGCTTGGCAACTTCCGGCTCC
EY913637       --> GAAGAGGTTGTATGAGCAACAAGTTGAACAGCTTGGCAACTTCCAGCTCC
EY907378       --> GAAGAGGTTGTATGAGCAACAAGTTGAACAGCTTGGCAACTTCCAGCTCC
FD989901       --> ..................................................
FD948869       --> ..................................................
FY449190       --> ..................................................
FY452372       --> ..................................................

               401    -    451
UN39102        --> GTATTCATGATCAAATGATTATGTTAGAAGGCGCAAAAGCAACAACCGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761735       <-- GTATTCATGATCAAATGATTATGTTAGAAGGCGCAAAAGCAACAACCGAG
EY936315       <-- GTATTCATGATCAAATGATTATGTTAGAAGGCGCAAAAGCAACAACCGAG
FD977776       <-- GTATTCATGATCAAATGATTATGTTAGAAGGCGCAAAAGCAACAACCGAG
FD985624       <-- .gATTCATGATCAAATGATTATGTTAGAAGGCGCAAAGGCAACAACCGAG
FD944595       <-- ..................................................
FD961653       <-- ..................................................
FD562387       --> GTATTCATGATCAAATGATTATGTTAGAAGGCGCAAAAGCAACAACCGAG
FD982157       --> GTATTCATGATCAAATGATTATGTTAGAAGGCGCAAAAGCAACAACCGAG
EY913637       --> GTATTCATGATCAAATGATTATGTTAGAAGGCGCAAAAGCAACAACCGAA
EY907378       --> GTATTCATGATCAAATGATTATGTTAGAAGGCGCAAAAGCAACAACCGAA
FD989901       --> .gATTCATGATCAAATGATTATGTTAGAAGGCGCAAAGGCAACAACCGAG
FD948869       --> ..................................................
FY449190       --> ..................................................
FY452372       --> ..................................................

               451    -    501
UN39102        --> ACTGTTGATGCGTTGAGGAGTGGAGCTTCTGCTATGAAAGCTATGCAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761735       <-- ACTGTTGATGCGTTGAGGAGTGGAGCTTCTGCTATGAAAACTATGCAGAA
EY936315       <-- ACTGTTGATGCGTTGAGGAGTGGAGCTTCTGCTATGAAAGCTATGCAGAA
FD977776       <-- ACTGTTGATGCGTTGAGGAGTGGAGCTTCTGCTATGAAAGCTATGCAGAA
FD985624       <-- GCTGTTGATGCGTTGAGGAGTGGAGCTTCTGCTATGAAAGCTATGCAGAA
FD944595       <-- .................................ggGAAAGCTATGCAGAA
FD961653       <-- ..................................................
FD562387       --> ACTGTTGATGCGTTGAGGAGTGGAGCTTCTGCTATGAAAGCTATGCAGAA
FD982157       --> ACTGTTGATGCGTTGAGGAGTGGAGCTTCTGCTATGAAAGCTATGCAGAA
EY913637       --> ACTGTTGATGCGTTGAGGAGTGGAGCTTCTGCTATGAAAGCTATGCAGAA
EY907378       --> ACTGTTGATGCGTTGAGGAGTGGAGCTTCTGCTATGAAAGCTATGCAGAA
FD989901       --> GCTGTTGATGCGTTGAGGAGTGGAGCTTCTGCTATGAAAGCTATGCAGAA
FD948869       --> .................................ggGAAAGCTATGCAGAA
FY449190       --> ..................................................
FY452372       --> ..................................................

               501    -    551
UN39102        --> AGCTACGAACATAGATGATGTAGACAAGACCATGGACGAGATCAATGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761735       <-- AGCTACGAACATAGATGATGTAGACAAGACCATGGACGAGATCAATGAGC
EY936315       <-- AACTACGAACATAGATGATGTAGACAAGACCATGGACGAGATCAACGAGC
FD977776       <-- AGCTACGAACATAGATGATGTAGACAAGACCATGGACGAGATCAATGAGC
FD985624       <-- AGCTACGAACATAGATGATGTAGACAAGACCATGGATGAGATCAATGAGC
FD944595       <-- AGCTACGAACATAGATGATGTAGACAAGATCATGGACGAGATCAACGAGC
FD961653       <-- ..................................................
FD562387       --> AGCTACGAACATAGATGATGTAGACAAGACCATGGACGAGATCAATGAGC
FD982157       --> AGCTACGAACATAGATGATGTAGACAAGACCATGGACGAGATCAATGAGC
EY913637       --> AGCTACGAACATAGATGATGTAGACAAGACCATGGACGAGATCAATGAGC
EY907378       --> AGCTACGAACATAGATGATGTAGATAAGACCATGGACGAGATCAATGAGC
FD989901       --> AGCTACGAACATAGATGATGTAGACAAGACCATGGATGAGATCAATGAGC
FD948869       --> AGCTACGAACATAGATGATGTAGACAAGATCATGGACGAGATCAACGAGC
FY449190       --> ..................................................
FY452372       --> ..................................................

               551    -    601
UN39102        --> AGACAGAGAACATGAAACAGATCCAAGAAGCATTGTCTACTCCAATCGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761735       <-- AGACAGAGAACATGAAACAGATCCAAGAAGCTTTGTCTACTCCAATCGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
EY936315       <-- AGACAGAGAACATGAAACAGATCCAAGAAGCATTGTTTACTCCAATCGGT  Raphanus sativus cv Early Scarlet Globe
FD977776       <-- AGACAGAGAACATGAAACAGATCCAAGAAGCATTGTCTACTCCAATCGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD985624       <-- AGACAGAGAACATGAAACAGATCCAAGAAGCTTTGTCTACTCCAATCGGT  Raphanus raphanistrum subsp. landra
FD944595       <-- AGACAGAGAACATGAAACAGATCCAAGAAGCATTGTCTACTCCAATCGGT  Raphanus sativus cv Early Scarlet Globe
FD961653       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
FD562387       --> AGACAGAGAACATGAAACAGATCCAAGAAGCATTGTCTACTCCAATCGGT  Raphanus sativus var. oleiformis
FD982157       --> AGACAGAGAACATGAAACAGATCCAAGAAGCATTGTCTACTCCAATCGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY913637       --> AGACAGAGAACATGAAACAGATCCAAGAAGCTTTGTCTACTCCAATCGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY907378       --> AGACAGAGAACATGAAACAGATCCAAGAAGCTTTGTCTACTCCAATCGGT  Raphanus raphanistrum subsp. raphanistrum (MS)
FD989901       --> AGACAGAGAACATGAAACAGATCCAAGAAGCTTTGTCTACTCCAATCGGT  Raphanus raphanistrum subsp. landra
FD948869       --> AGACAGAGAACATGAAACAGATCCAAGAAGCATTGTCTACTCCAATCGGT  Raphanus sativus cv Early Scarlet Globe
FY449190       --> ..................................................  Raphanus sativus cv GSK3-1
FY452372       --> ..................................................  Raphanus sativus cv GSK3-1

               601    -    651
UN39102        --> GCGGCTGCTGACTTCGATGAGGATGAGCTCGAAGCTGAGCTTGAAGAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761735       <-- GCGGCTGCTGGCTTCGATGAGGATGAGCTCGAAGCTGAGCTTGAAGAATT
EY936315       <-- GCGGCTGCTGACTTCGATGAGGATGAGCTCGAAGCTGAGCTTGAAGAATT
FD977776       <-- GCGGCTGCTGACTTCGATGAGGATGAGCTCGAAGCTGAGCTTGAAGAATT
FD985624       <-- GCGGCTGCTGACTTCGATGAGGATGAGCTCGAAGCTGAGCTTGAAGAATT
FD944595       <-- GCGGCTGCTGACTTCGATGAGGATGAGCTCGAAGCTGAGCTTGAAGAATT
FD961653       <-- ..................................................
FD562387       --> GCGGCTGCTGACT.....................................
FD982157       --> GCGGCTGCTGACTTCGATGAGGATGAGCTCGAAGCTGAGCTTGAA.....
EY913637       --> GCGGCTGCTGACTTCGATGAGGATGAGCTCGAAGCTGAGCTTGAAGAATT
EY907378       --> GCGGCTGCTGACTTCGATGAGGATGAGCTCGAAGCTGAGCTTGAAGAATT
FD989901       --> GCGGCTGCTGACTTCGATGAGGATGAGCTCGAAGCTGAGCTTGAAGAATT
FD948869       --> GCGGCTGCTGACTTCGATGAGGATGAGCTCGAAGCTGAGCTTGAAGAATT
FY449190       --> .............................tcgAGCTGAGCTTGAAGAAT-
FY452372       --> ..................................................

               651    -    701
UN39102        --> AGAAGGTGCAGAGCTTGAAGAACAACTTCTTCAGCCAACACCAATGCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761735       <-- AGAAGGTTCAGAGCTTGAAGAACAACTTCTTCAGCCAACACCAATGCCTT
EY936315       <-- AGAAGGTGCAGAGCTTGAAGAACAACTTCTTCAGCCAACACCAATGCCTT
FD977776       <-- AGAAGGTGCAGAGCTTGAAGAACAACTTCTTCAGCCAACACCAATGCCTT
FD985624       <-- AGAAGGTGCAGAGCTTGAAGAACAACTTCTTCAGCCAACACCAATGCCTT
FD944595       <-- AGAAGGTGCAGAGCTTGAAGAACAACTTCTTCAGCCAACACCAATGCCTT
FD961653       <-- ..................................................
FD562387       --> ..................................................
FD982157       --> ..................................................
EY913637       --> AGAAAGTGCAGAGCTTGAAGAACAACTTCTTCAGCCAACACCAATGCCTT
EY907378       --> AGAAAGTGCAGAGCTTGAAGAACAACTTCTTCAGCCAACACCAATGCCTT
FD989901       --> AGAAGGTGCAGAGCTTGAAGAACAACTTCTTCAGCCAACACCAATGCCTT
FD948869       --> AGAAGGTGCAGAGCTTGAAGAACAACTTCTTCAGCCAACACCAATGCCTT
FY449190       --> AGAAGGTGCAGAGCTTGAAGAACTACTTCTTCAGCCAACACCAATGCCTT
FY452372       --> ......................................CACCAATGCCTT

               701    -    751
UN39102        --> CTGTTCCAGGGCGTCAACCAGTCCGTCCTGTTGCTCCTAAACGGACAGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761735       <-- CTGTTCCAGGGCGTCAACCAGTCCGTCCTGTTGCTCCTAAACGGACAGCC
EY936315       <-- CTGTTCCAGGGCGTCAACCAGTCCGTCCTGTTGCTCCTAAACGGACAGCC
FD977776       <-- CTGTTCCAGGGCGTCAACCAGTCCGTCCTGTTGCTCCTAAACGGACAGCC
FD985624       <-- CTGTTCCAGGGCGTCAACCAGTCCGTCCTGTTGCTCCTAAACGGACAGCC
FD944595       <-- CTGTTCCAGGGCGTCAACCAGTCCGTCCTGTTGCTCCTAAACGGACAGCC
FD961653       <-- ..................................................
FD562387       --> ..................................................
FD982157       --> ..................................................
EY913637       --> CTGTTCCAGGGCGTCAACCAGTCCGTCCTGTTGCTCCTAAACGGACAGCC
EY907378       --> CTGTTCCAGGGCGTCAACCAGTCCGTCCTGTTGCTCCTAAACGGACAGC.
FD989901       --> CTGTTCCAGGGCGTCAACCAGTCCGTCCTGTTGCTCCTAAACGGACAGCC
FD948869       --> CTGTTCCAGGGCGTCAACCAGTCCGTCCTGTTGCTCCTAAACGGACAGCC
FY449190       --> CTGTTCCAGGGCGTCAACCAGTCCGTCCTGTTGCTCCTAAACGGACAGCC
FY452372       --> CTGTTC-AGGGCGTCAACCAGTCCGTCCTGTTGCTCCTAAACGGACAGCC

               751    -    801
UN39102        --> GAGGAAGAAGAACTCGCTGCATTACAGGCTGAGATGGCCCTCTAAAGGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761735       <-- GAGGAAGAAGAACTCGCTGCATTACAGGCTGAGATGGCCCTCTAA-GGTT
EY936315       <-- GAGGAAGAAGAACTCGCTGCATTACAGGCTGAGATGGCCCTCTAAAGGTT
FD977776       <-- GAGGAAGAAGAACTCGCTGCATTACAGGCTGAGATGGCCCTCTAAAGGTT
FD985624       <-- GAGGAAGAAGAACTCGCTGCATTACAGGCTGAGATGGCCCTCTAAAGGTT
FD944595       <-- GAGGAAGAAGAACTCGCTGCATTACAGGCTGAGATGGCCCTCTAAAGGTT
FD961653       <-- ..................................................
FD562387       --> ..................................................
FD982157       --> ..................................................
EY913637       --> G.................................................
EY907378       --> ..................................................
FD989901       --> GAGGAAGAAGAACTCGCTGCATTACAGGCTGAGATGGCCCTCTAAAGGTT
FD948869       --> GAGGAAGAAGAACTCGCTGCATTACAGGCTGAGATGGCCCTCTAAAGGTT
FY449190       --> GAGGAAGAAGAACTCGCTGCATTACAGGCTGAGATGGCCCTCTAAAGGTT
FY452372       --> GAGGAAGAAGAACTCGCTGCATTACAGGCTGAGATGGCCCTCTAAAGGTT

               801    -    851
UN39102        --> ATTGACTTGGTTTGAGCAGATCTGTGTATGCATTGATGATAAACAAGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761735       <-- ATTGACTTGGTTTGAGCAGATCTGTGTATGCATTGATGATAAACAAGAAC
EY936315       <-- ATTGACTTGGTTTGAGCAGATCTGTGTATGCATTGATGATAAACAAGAAC
FD977776       <-- ATTGACTTGGTTTGAGCAGATCTGTGTATGCATTGATGATAAACAAGAAC
FD985624       <-- ATTGACTTGGTTTGAGCAGATCTGTGTATGCATTGATGATAAACAAGAAC
FD944595       <-- ATTGACTTGGTTTGAGCAGATCTGTGTATGCATTGATGATAAACAAGAAC
FD961653       <-- .................gGATCTGTGTATGCATTGATGATAAACAAGAAC
FD562387       --> ..................................................
FD982157       --> ..................................................
EY913637       --> ..................................................
EY907378       --> ..................................................
FD989901       --> ATTGACTTGGTTTGAGCAGATCTGTGTATGCATTGATGATAAACAAGAAC
FD948869       --> ATTGACTTGGTTTGAGCAGATCTGTGTATGCATTGATGATAAACAAGAAC
FY449190       --> ATTGACTTGGTTTGAGCAGATCTGTGTATGCATTGATGATAAACAAGAAC
FY452372       --> ATTGACTTGGTTTGAGCAGATCTGTGTATGCATTGATGATAAACAAGAAC

               851    -    901
UN39102        --> ATGCGATGTATATTATATAAAAAGGATCACCAGAGTCAAAATCAAACTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761735       <-- ATGCGATGTATATTATATAAAAAGGATCACCAGAGTCAAAATCAAACTGG
EY936315       <-- ATGCGATGTATATTATATAAAAAGGATCACCAGAGTCAAAATCAAACTGG
FD977776       <-- ATGCGATGTATATTATATAAAAAGGATCACCAGAGTCAAAATCAAACTGG
FD985624       <-- ATGTGATGTATATTATATAAAAAGGATCACCAGAGTCAAAATCAAACTGG
FD944595       <-- ATGCGATGTATATTATATAAAAAGGATCACCAGAGTCAAAATCAAACTGG
FD961653       <-- ATGTGATGTATATTATATAAAAAGGATCACCAGAGTCAAAATCAAACTGG
FD562387       --> ..................................................
FD982157       --> ..................................................
EY913637       --> ..................................................
EY907378       --> ..................................................
FD989901       --> ATGtg.............................................
FD948869       --> ATGCGATGTATATTATATAAAAAGGATCACCAGAGTCAAAATCAAACTGG
FY449190       --> ATGCGATGTATATTATATAAAAAGGATCACCAGAGTCAAAATCAAACTGG
FY452372       --> ATGCGATGTATATTATATAAAAAGGATCACCAGAGTCAAAATCAAACTGG

               901    -    951
UN39102        --> ACCGGAACTTTAAGAATCATCATCGCCGTGAATGTTATCAACATTTGACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761735       <-- AGCGGAACTTTAAGAATCTTCGTCGTCGTGAATGTTATC...........
EY936315       <-- ACCGGAACTTTAAGAATCATCATCGCCGTGAATGTTATCAACATTTGACT
FD977776       <-- ACCGGAACTTTAAGAATCATCATCGCCGTGAATGTTATCAACATTTGACT
FD985624       <-- ACCGGAACTTTAAGAATCATCATCGCCGTGAATGTTATCAACATTTGACT
FD944595       <-- ACCGGAACTTTAAGAATCATCATCGCCGTGAATGTTATCAACATTTGACT
FD961653       <-- ACCGGAACTTTAAGAATCATCATCGCCGTGAATGTTATCAACATTTGACT
FD562387       --> ..................................................
FD982157       --> ..................................................
EY913637       --> ..................................................
EY907378       --> ..................................................
FD989901       --> ..................................................
FD948869       --> ACCGGAACTTTAAGAATCATCATCGCCGTGAATGTTATCAACATTTGACT
FY449190       --> ACCGGAACTTTAAGAATCATCATCGCCGTGAATGTTATCAACATTTGACT
FY452372       --> ACCGGAACTTTAAAAATCATCATCGCCGTGAATGTTATCAACATTTGACT

               951    -   1001
UN39102        --> TGCTCACATATTTTTATATTTTATCGTTTTGTAATATTTGAATCGTTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761735       <-- ..................................................
EY936315       <-- TGCTCACATATTTTTATATTTTATCGTTTTGTAATATTTGAATCGTTTGT
FD977776       <-- TGCTCACATATTTTTATATTTTATCGTTTTGTAATATTTGAATCGTTTGT
FD985624       <-- TGCTCACATATTTTTATATTTTATCGTTTTGTAATATTTGAATCGTTTGT
FD944595       <-- TGCTCACATATTTTTATATTTTATCGTTTTGTAATATTTGAATCGTTTGT
FD961653       <-- TGCTCACATATTTTTATATTTTATCGTTTTGTAATATTTGAATCGTTTGT
FD562387       --> ..................................................
FD982157       --> ..................................................
EY913637       --> ..................................................
EY907378       --> ..................................................
FD989901       --> ..................................................
FD948869       --> TGCTCACATATTTTTATATTTTATCGTTTTGTAATATTTGAATCGTTTGT
FY449190       --> TGCTCACATATTTTTATATTTTATCGTTTTGTAATATTTGAATCGTTTGT
FY452372       --> TGCTCACATATTTTTATATTTTATCGTTTTGTAATATTTGAATCGTTTGT

               1001   -   1051
UN39102        --> GACACGTTGTTTTTTCTGTAGTTTGTGACATGCATCGTTATACTCAATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761735       <-- ..................................................
EY936315       <-- GACACGTTGTTTTTTCTGTAGTTTGTGACATGCATCGTTATACTC.....
FD977776       <-- GACACGTTGTTTTTTCTGTAGTTTGTGACATGCATCGT............
FD985624       <-- GACACGTTGTTTTTTCTGTAGTTTGTGACATGCATCGTTATACTCAATTC
FD944595       <-- GACACGTTGTTCTTTCTGTAGTTTGTGACATGCATCGTTATACTCAATTC
FD961653       <-- GACACGTTGTTTTTTCTGTAGTTTGTGACATGCATCGTTATACTCAATTC
FD562387       --> ..................................................
FD982157       --> ..................................................
EY913637       --> ..................................................
EY907378       --> ..................................................
FD989901       --> ..................................................
FD948869       --> GACACGTTGTTCTTTCTGTAGTTTGTGACATGCATCGTTATACTCAATTC
FY449190       --> GACACGTTGTTTTTTCTGTAGTTTGTGACATGCATCGTTATACTCAATTC
FY452372       --> GACACGTTGTTTTTTCTGTAGTTTGTGACATGCATCGTTATACTCAATTC

               1051   -   1101
UN39102        --> AAATCCTCACAGCCAATAGATGAGAAACGCTTGTCACAATTATTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX761735       <-- ...............................................
EY936315       <-- ...............................................
FD977776       <-- ...............................................
FD985624       <-- AAATCCTCAC.....................................
FD944595       <-- t..............................................
FD961653       <-- AAATCCTCACAGCCAATAGATGAG.......................
FD562387       --> ...............................................
FD982157       --> ...............................................
EY913637       --> ...............................................
EY907378       --> ...............................................
FD989901       --> ...............................................
FD948869       --> t..............................................
FY449190       --> AAATCCTCACAGCCAATAGATGAGAAACGCTTGTCACAATT......
FY452372       --> AAATCCTCACAGCCAATAGATGAGAAACGCTTGTCACAATTATTGTC