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Alignment for radish unigene UN39302

               1      -     51
UN39302        --> GGACTTAAAGCAGCAGCAGCCGAAGCGCTGGGTTGAGAGAGACAAAAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570733       <-- ..................................................
EV570732       <-- ..................................................
FD977575       <-- ..................................................
FD961678       <-- ..................................................
EY895688       <-- ..................................................
EY900044       --> GGACTTAAAGCAGCAGCAGCCGAAGCGCTGGGTTGAGAGAGACAAAAAGT
FD966130       --> GGACTTAAAGCAGCAGCAGCCGAAGCGCTGGGTTGAGAGAGACAAAAAGT
EV565424       --> ................................ggGAGAGAGACAAAAAGT
EV565425       --> ................................ggGAGAGAGACAAAAAGT
FD981903       --> ..................................................

               51     -    101
UN39302        --> AAGCCATGTCTGTGAAAGCAATTATCGTATCATCGGTGGTTCTGCTGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570733       <-- ..................................................
EV570732       <-- ..................................................
FD977575       <-- ..................................................
FD961678       <-- ..................................................
EY895688       <-- ..................................................
EY900044       --> AAGCCATGTCTGTGAAAGCAATTATCGTATCATCGGTGGTTCTGCTGATC
FD966130       --> AAGCCATGTCTGTGAAAGCAATTATCGTATCATCGGTGGTTCTGCTGATC
EV565424       --> AAGCCATGTCTGTGAAAGCAATTATCGTATCATCGGTGGTTCTGCTGATC
EV565425       --> AAGCCATGTCTGTGAAAGCAATTATCGTATCATCGGTGGTTCTGCTGATC
FD981903       --> ..................................................

               101    -    151
UN39302        --> CTCGTAGCCGCATCAGCGGAGGCTTATACAGGATTCGATGAGTCAAACCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570733       <-- ..................................................
EV570732       <-- ..................................................
FD977575       <-- ..................................................
FD961678       <-- ..................................................
EY895688       <-- ..................................................
EY900044       --> CTCGTAGCCGCATCAGCGGAGGCTTATACAGGATTCGATGAGTCAAACCC
FD966130       --> CTCGTAGCCGCATCAGCGGAGGCTTATACAGGATTCGATGAGTCAAACCC
EV565424       --> CTCGTAGCCGCATCAGCGGAGGCTTATACAGGATTCGATGAGTCAAACCC
EV565425       --> CTCGTAGCCGCATCAGCGGAGGCTTATACAGGATTCGATGAGTCAAACCC
FD981903       --> ................gGGAGGCTTATACAGGATTCGATGAGTCAAACCC

               151    -    201
UN39302        --> GATCCGTATGGTCTCCGACGGTCTTAGGGAGATAGAAGAATCCATTGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570733       <-- ..................................................
EV570732       <-- ..................................................
FD977575       <-- ..................................................
FD961678       <-- ..................................................
EY895688       <-- ..................................................
EY900044       --> GATCCGTATGGTCTCCGACGGTCTTAGGGAGATAGAAGAATCCATTGTCC
FD966130       --> GATCCGTATGGTCTCCGACGGTCTTAGGGAGATAGAAGAATCCATTGTCC
EV565424       --> GATCCGTATGGTCTCCGACGGTCTTAGGGAGATAGAAGAATCCATTGTCC
EV565425       --> GATCCGTATGGTCTCCGACGGTCTTAGGGAGATAGAAGAATCCATTGTCC
FD981903       --> GATCCGTATGGTCTCCGACGGTCTTAGGGAGATAGAAGAATCCATTGTCC

               201    -    251
UN39302        --> AGATCTTAGGACAATCTCGTCACGTTCTATCCTTCGCTCGCTTCACTCAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570733       <-- ..................................................
EV570732       <-- ..................................................
FD977575       <-- ..................................................
FD961678       <-- ..................................................
EY895688       <-- ..................................................
EY900044       --> AGATCTTAGGACAATCTCGTCACGTTCTATCCTTCGCTCGCTTCACTCAC
FD966130       --> AGATCTTAGGACAATCTCGTCACGTTCTATCCTTCGCTCGCTTCACTCAC
EV565424       --> AGATCTTAGGACAATCTCGTCACGTTCTATCCTTCGCTCGCTTCACTCAC
EV565425       --> AGATCTTAGGACAATCTCGTCACGTTCTATCCTTCGCTCGCTTCACTCAC
FD981903       --> AGATCTTAGGACAATCTCGTCACGTTCTATCCTTCGCTCGCTTCACTCAC

               251    -    301
UN39302        --> CAGTATGGGAAAAGGTATGAGAACGCGGAGGAGATAAAGCTCAGATTTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570733       <-- ..................................................
EV570732       <-- ..................................................
FD977575       <-- ..................................................
FD961678       <-- ..................................................
EY895688       <-- ..................................................
EY900044       --> CAGTATGGGAAAAGGTATGAGAACGCGGAGGAGATAAAGCTCAGATTTTC
FD966130       --> CAGTATGGGAAAAGGTATGAGAACGCGGAGGAGATAAAGCTCAGATTTTC
EV565424       --> CAGTATGGGAAAAGGTATGAGAACGCGGAGGAGATAAAGCTCAGATTTTC
EV565425       --> CAGTATGGGAAAAGGTATGAGAACGCGGAGGAGATAAAGCTCAGATTTTC
FD981903       --> CAGTATGGGAAAAGGTATGAGAACGCGGAGGAGATAAAACTCAGATTTTC

               301    -    351
UN39302        --> GATTTTCAAGGAGAGTCTTGACTTGATCAGATCCACCAACAAGAAAGGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570733       <-- ..................................................
EV570732       <-- ..................................................
FD977575       <-- ..................................................
FD961678       <-- ..................................................
EY895688       <-- ..................................................
EY900044       --> GATTTCCAAGGAGAGTCTTGACTTGATCAGATCCACCAACAAGAAAGGCT
FD966130       --> GATTTTCAAGGAGAGTCTTGACTTGATCAGATCCACCAACAAGAAAGGCT
EV565424       --> GATTTTCAAGGAGAGTCTTGACTTGATCAGATCCACCAACAAGAAAGGCT
EV565425       --> GATTTTCAAGGAGAGTCTTGACTTGATCAGATCCACCAACAAGAAAGGCT
FD981903       --> GATTTTCAAGGAGAGTCTTGACTTGATCAGATCCACCAACAAGAAAGGCT

               351    -    401
UN39302        --> TGTCTTACAAACTTGGCCTCAATCAGTTTGCTGATATGACCTGGGAAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570733       <-- ..................................................
EV570732       <-- ..................................................
FD977575       <-- ..................................................
FD961678       <-- ..................................................
EY895688       <-- ..................................................
EY900044       --> TGTCTTACAAACTTGGCCTCAATCAGTTTGCTGATATGACCTGGGAAGAA
FD966130       --> TGTCTTACAAACTTGGCCTCAATCAGTTTGCTGATATGACCTGGGAAGAA
EV565424       --> TGTCTTACAAACTTGGCCTCAATCAGTTTGCTGATATGACCTGGGAAGAA
EV565425       --> TGTCTTACAAACTTGGCCTCAATCAGTTTGCTGATATGACCTGGGAAGAA
FD981903       --> TGTCTTACAAACTTGGCCTCAATCAGTTTGCTGATATGACCTGGGAAGAA

               401    -    451
UN39302        --> TTTCAAAGTAGCAAGCTTGGTGCTGCTCAAAACTGCTCTGCCACTTTAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570733       <-- .......................TGCTCAAAACTGCTCTGCCACTTTAAA
EV570732       <-- ..................................................
FD977575       <-- ..................................................
FD961678       <-- ..................................................
EY895688       <-- ..................................................
EY900044       --> TTTCAAAGGAGCAAGCTTGGTGCTGCTCAAAACTGCTCTGCCACTTTAAA
FD966130       --> TTTCAAAGGAGCAAGCTTGGTGCTGCTCAAAACTGCTCTGCCACTTTAAA
EV565424       --> TTTCAAAGTAGCAAGCTTGGTGCTGCTCAAAACTGCTCTGCCACTTTAAA
EV565425       --> TTTCAAAGTAGCAAGCTTGGTGCTGCTCAAAACTGCTCTGCCACTTTAAA
FD981903       --> TTTCAAAGAAGCAAGCTTGGTGCTGCTCAAAACTGCTCTGCCACTTTAAA

               451    -    501
UN39302        --> GGGAAGCCACAAACTCACCAAAGAAGCTCTTCCAGAAACCAAAGACTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570733       <-- GGGAAGCCACAAACTCACCAAAGAAGCTCTTCCAGAAACCAAAGACTGGA
EV570732       <-- ..............................TCCAGAAACCAAAGACTGGA
FD977575       <-- ..................................................
FD961678       <-- ..................................................
EY895688       <-- ..................................................
EY900044       --> GGGAAGCCACAAACTCACCAAAGAAGCTCTTCCAGAAACCAAAGACTGGA
FD966130       --> GGGAAGCCACAAACTCACCAAAGAAGCTCTTCCAGAAACCGAAGACTGGA
EV565424       --> GGGAAGCCACAAACTCACCAAAGAAGCTCTTCCAGAAACCAAAGACTGGA
EV565425       --> GGGAAGCCACAAACTCACCAAAGAAGCTCTTCCAGAAACCAAAGACTGGA
FD981903       --> GGGAAGCCACAAACTCACCAAAGAAGCTCTTCCAGAAACCAAAGACCGGA

               501    -    551
UN39302        --> GAGAAGATGGTATTGTTAGTCCAGTCAAAGAACAGGGCAAATGTGGATCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570733       <-- GAGAAGATGGTATTGTTAGTCCAGTCAAAGAACAGGGCAAATGTGGATCT
EV570732       <-- GAGAAGATGGTATTGTTAGTCCAGTCAAAGAACAGGGCAAATGTGGATCT
FD977575       <-- ..................................................
FD961678       <-- ..................................................
EY895688       <-- ..................................................
EY900044       --> GAGAAGATGGTATTGTTAGTCCAGTCAAAGAACAGGGCAAATGTGGATCT
FD966130       --> GAGAAGATGGTATTGTTAGTCCAGTCAAAGAACAGGGCAAATGTGGATCT
EV565424       --> GAGAAGATGGTATTGTTAGTCCAGTCAAAGAACAGGGCAAATGTGGATCT
EV565425       --> GAGAAGATGGTATTGTTAGTCCAGTCAAAGAACAGGGCAAATGTGGATCT
FD981903       --> GAGAAGATGGTATTGTTAGTCCAGTCAAAGAACAGGGCAAATGTGGATCT

               551    -    601
UN39302        --> TGCTGGACTTTCAGTACTACTGGAGCTCTTGAGGCAGCTTATCATCAAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570733       <-- TGCTGGACTTTCAGTACTACTGGAGCTCTTGAGGCAGCTTATCATCAAGC
EV570732       <-- TGCTGGACTTTCAGTACTACTGGAGCTCTTGAGGCAGCTTATCATCAAGC
FD977575       <-- ...........................CTTGAGGCAGCTTATCATCAAGC
FD961678       <-- ..................................................
EY895688       <-- ..................................................
EY900044       --> TGCTGGACTTTCAGTACTACTGGAGCTCTTGAGGCAGCTTATCATCAAGC
FD966130       --> TGCTGGACTTTCAGTACTACTGGAGCTCTTGAGGCAGCTTATCATCAAGC
EV565424       --> TGCTGGACTTTCAGTACTACTGGAGCTCTTGAGGCAGCTTATCATCAAGC
EV565425       --> TGCTGGACTTTCAGTACTACTGGAGCTCTTGAGGCAGCTTATCATCAAGC
FD981903       --> TGCTGGACTTTCAGTACTACTGGAGCTCTTGAGGCAGCTTATCATCAAGC

               601    -    651
UN39302        --> ATTTGGGAAAGCAATATCTCTCTCTGAGCAACAGCTAGTGGATTGTGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570733       <-- ATTTGGGAAAGCAATATCTCTCTCTGAGCAACAGCTAGTGGATTGTGCTG
EV570732       <-- ATTTGGGAAAGCAATATCTCTCTCTGAGCAACAGCTAGTGGATTGTGCTG
FD977575       <-- ATTTGGGAAAGCAATATCTCTCTCTGAGCAACAGCTAGTGGATTGTGCTG
FD961678       <-- ..................................................
EY895688       <-- ..................................................
EY900044       --> ATTTGGGAAAGCAATATCTCTCTCTGAGCAACAGCTAGTGGATTGTGCTG
FD966130       --> ATTTGGGAAAGCAATATCTCTCTCTGAGCAACAGTTAGTGGATTGTGCTG
EV565424       --> ATTTGGGAAAGCAATATCTCTCTCTGAGCAACAGCTAGTGGATTGTGCTG
EV565425       --> ATTTGGGAAAGCAATATCTCTCTCTGAGCAACAGCTAGTGGATTGTGCTG
FD981903       --> ATTTGGGAAAGCAATATCTCTCTCTGAGCAACAGCTAGTGGATTGTGCTG

               651    -    701
UN39302        --> GAGCTTTCAACAACTTTGGCTGCAATGGTGGCCTTCCTTCCCAAGCCTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570733       <-- GAGCTTTCAACAACTTTGGCTGCAATGGTGGCCTTCCTTCCCAAGCCTTT
EV570732       <-- GAGCTTTCAACAACTTTGGCTGCAATGGTGGCCTTCCTTCCCAAGCCTTT
FD977575       <-- GAGCTTTCAACAACTTTGGCTGCAATGGTGGCCTTCCTTCCCAAGCCTTT
FD961678       <-- ..GCTTTCAACAACTTTGGCTGCAATGGTGGCCTTCCTTCCCAAGCCTTT
EY895688       <-- ..................................................
EY900044       --> GAGCTTTCAACAACTTTGGCTGCAATGGTGGCCTTCCTTCCCAAGCCTTT
FD966130       --> GAGCTTTCAACAACTTTGGCTGCAATGGTGGCCTTCCTTCC-AAGCCTTT
EV565424       --> GAGCTTTCAACAACTTTGGCTGCAATGGTGGCCTTCCTTCCCAAGCCTTT
EV565425       --> GAGCTTTCAACAACTTTGGCTGCAATGGTGGCCTTCCTTCCCAAGCCTTT
FD981903       --> GAGCTTTCAACAACTTTGGCTGCAATGGTGGCCTTCCTTCCCAAGCCTTT

               701    -    751
UN39302        --> GAATACATCAAATCCAACGGTGGCCTCGACACAGAGGAAGCTTATCCTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570733       <-- GAATACATCAAATCCAACGGTGGCCTCGACACAGAGGAAGCTTATCCTTA
EV570732       <-- GAATACATCAAATCCAACGGTGGCCTCGACACAGAGGAAGCTTATCCTTA
FD977575       <-- GAATACATCAAATCCAACGGTGGCCTCGACACAGAGGAAGCTTATCCTTA
FD961678       <-- GAATACATCAAATCCAACGGTGGCCTCGACACAGAGGAAGCTTATCCTTA
EY895688       <-- ..................................................
EY900044       --> GAATACATCAAATCCAACGGTGGCCTCGACAC..................
FD966130       --> GAATACATCAAATCCAACGGTGGCCTCGACACAGAGGA-GCTTATCCTTA
EV565424       --> GAATACATCAAATCCAACGGTGGCCTCGACACAGAGGAAGCTTATCCTTA
EV565425       --> GAATACATCAAATCCAACGGTGGCCTCGACACAGAGGAAGCTTATCCTTA
FD981903       --> GAATACATCAAATCCAACGGTGGCCTCGACACAGAGGAAGCTTATCCTTA

               751    -    801
UN39302        --> CACCGCTAAAAACTGAACCTGCAAATATTCAGCTGAAAACATCGGTGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570733       <-- CACCGCTAAAAACTGAACCTGCAAATATTCAGCTGAAAACATCGGTGTAC  Raphanus raphanistrum subsp. landra
EV570732       <-- CACCGCTAAAAACTGAACCTGCAAATATTCAGCTGAAAACATCGGTGTAC  Raphanus raphanistrum subsp. landra
FD977575       <-- CACCACTAAAAACGGAACCTGCAAATATTCAGCTGAAAACATCGGTGTAC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961678       <-- CACCGCTAAAAACGGAACCTGCAAATATTCAGCTGAAAACATCGGTGTAC  Raphanus raphanistrum subsp. maritimus
EY895688       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EY900044       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD966130       --> CACCGCTAAAA.......................................  Raphanus raphanistrum subsp. maritimus
EV565424       --> CACCGCTAAAAACTGAACCTGCAAATATTCAGCTGAAAACATCGGTGTAC  Raphanus raphanistrum subsp. landra
EV565425       --> CACCGCTAAAAACTGAACCTGCAAATATTCAGCTGAAAACATCGGTGTAC  Raphanus raphanistrum subsp. landra
FD981903       --> CACCACTAAAAACGGAACCTGCAAATATTCAGCTGAAAACATCGGTGTAC  Raphanus raphanistrum subsp. raphanistrum (NY)

               801    -    851
UN39302        --> AAGTCCTCGACTCTGTCAACATTACTATGGGTGCTGAAGATGAACTGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570733       <-- AAGTCCTCGACTCTGTCAACATTACTATGGGTGCTGAAGATGAACTGAAG
EV570732       <-- AAGTCCTCGACTCTGTCAACATTACTATGGGTGCTGAAGATGAACTGAAG
FD977575       <-- AAGTCCTCGACTCTGTCAACATTACTATGGGTGCTGAAGATGAACTGAAG
FD961678       <-- AAGTCCTCGACTCTGTCAACATTACTATGGGTGCTGAAGATGAACTGAAG
EY895688       <-- .................AACATTACTATGGGTGCTGAAGATGAACTGAAG
EY900044       --> ..................................................
FD966130       --> ..................................................
EV565424       --> AAGTCCTCGACTCTGTCA-CATTACTATGGGTGCTGAAGATGAACTGAAG
EV565425       --> AAGTCCTCGACTCTGTCAACATTACTATGGGTGCTGAAGATGA-CTGAAG
FD981903       --> AAGTCCTCGACTCTGTCAACATTACTATGGGTGCTGAAGATGAACTGAAG

               851    -    901
UN39302        --> CATGCGGTTGGATTGG-TGCGACCAGTAAGCATAGCATTCCAGGTTATAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570733       <-- CATGCGGTTGGATTGG-TGCGACCAGTAAGCATAGCATTCCAGGTTATAC
EV570732       <-- CATGCGGTTGGATTGG-TGCGACCAGTAAGCATAGCATTCCAGGTTATAC
FD977575       <-- CATGCGGTTGGATTGG-TGCGACCAGTAAGCATAGCATTCCAGGTTATAC
FD961678       <-- CATGCGGTTGGATTGG-TGCGACCAGTAAGCATAGCATTCCAGGTTATAC
EY895688       <-- CATGCGGTTGGATTGG-TGCGACCAGTAAGCATAGCATTCCAGGTTATAC
EY900044       --> ..................................................
FD966130       --> ..................................................
EV565424       --> CATGCGGTTGGATTGG-TGCGACCAGTAAGCATAGCAT............
EV565425       --> CATGCGGTTGGATTGGGTGCGACCAGTAAGCATAGCATTCCAGGTTATAC
FD981903       --> CATGCGGTTGGATTGG-TGCGACCAGTAAGCATAGCATTCCAGGTTATAC

               901    -    951
UN39302        --> ACTCGTTCCGGCTTTACGATGGCGGAGTTTATTCTGATAGTAACTGTAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570733       <-- ACTCGTTCCGGCTTTACGATGGCGGAGTTTATTCTGATAGTAACTGTAAT
EV570732       <-- ACTCGTTCCGGCTTTACGATGGCGGAGTTTATTTTGATAGTAACTGTAAT
FD977575       <-- ACTCGTTCCGGCTTTACGATGGCGGAGTTTATTCTGATAGTAACTGTAAT
FD961678       <-- ACTCGTTCCGGCTTTACGATGGCGGAGTTTATTTTGATAGTAACTGTAAT
EY895688       <-- ACTCGTTCCGGCTTTACGATGGCGGAGTTTATTCTGATAGTAACTGTAAT
EY900044       --> ..................................................
FD966130       --> ..................................................
EV565424       --> ..................................................
EV565425       --> ACTCGT............................................
FD981903       --> ACTC..............................................

               951    -   1001
UN39302        --> AATACATCAAAGGATGTGAACCACGCGGTGTTGGCGGTTGGTTATGGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570733       <-- AATACATCAAAGGATGTGAACCACGCGGTGTTGGCGGTTGGTTATGGAAT
EV570732       <-- AATACATCAAAGGATGTGAACCACGCGGTGTTGGCGGTTGGTTATGGAAT
FD977575       <-- AATACATCAAAGGATGTGAACCACGCGGTGTTGGCGGTTGGTTATGGAAT
FD961678       <-- AATACATCAAAGGATGTGAACCACGCGGTGTTGGCGGTTGTTTATGGAAT
EY895688       <-- AATACATCAAAGGATGTGAACCACGCGGTGTTGGCGGTTGGTTATGGAAT
EY900044       --> ..................................................
FD966130       --> ..................................................
EV565424       --> ..................................................
EV565425       --> ..................................................
FD981903       --> ..................................................

               1001   -   1051
UN39302        --> TGAAAAAGGTGTTCCATATTGGCTTATAAAGAACTCATGGGGAGCGAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570733       <-- TGAAAAAGGTGTTCCATATTGGCTTATAAAGAACTCATGGGGAGCGAGTT
EV570732       <-- TGAAAAAGGTGTTCCATATTGGCTTATAAAGAACTCATGGGGAGCGAGTT
FD977575       <-- TGAAAAAGGTGTTCCATATTGGCTTATAAAGAACTCATGGGGAGCGAGTT
FD961678       <-- TGAAAAAGGTGTTCCATATTGGCTTATAAAGAACTCATGGGGAGCGAGTT
EY895688       <-- TGAAAAAGGTGTTCCATATTGGCTTATAAAGAACTCATGGGGAGCGAGTT
EY900044       --> ..................................................
FD966130       --> ..................................................
EV565424       --> ..................................................
EV565425       --> ..................................................
FD981903       --> ..................................................

               1051   -   1101
UN39302        --> GGGGTAACAAAGGTTACTTCAAGATGGAGATGGGGAAGAACATGTGTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570733       <-- GGGGTAACAAAGGTTACTTCAAGATGGAGATGGGGAAGAACATGTGTGGT
EV570732       <-- GGGGTAACAAAGGTTACTTCAAGATGGAGATGGGGAAGAACATGTGTGGT
FD977575       <-- GGGGTAACAAAGGTTACTTCAAGATGGAGATGGGGAAGAACATGTGTGGT
FD961678       <-- GGGGTAACAAAGGTTACTTCAAGATGGAGATGGGGAAGAACATGTGTGGT
EY895688       <-- GGGGTAACAAAGGTTACTTCAAGATGGAGATGGGGAAGAACATGTGTGGT
EY900044       --> ..................................................
FD966130       --> ..................................................
EV565424       --> ..................................................
EV565425       --> ..................................................
FD981903       --> ..................................................

               1101   -   1151
UN39302        --> ATTGCGACATGTGCATCTTACCCGGTTGTGGCCTAGATGATCAGCGAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570733       <-- ATTGCGACATGTGCATCTTACCCGGTTGTGGCCTAGATGATCAGCGAATG
EV570732       <-- ATTGCGACATGTGCATCTTACCCGGTTGTGGCCTAGATGATCAGCGAATG
FD977575       <-- ATTGCGACATGTGCATCTTACCCGGTTGTGGCCTAGATGATCAGCGAATG
FD961678       <-- ATTGCGACATGTGCATCTTACCCGGTTGTGGCCTAGATGATCAGCGAATG
EY895688       <-- ATTGCGACATGTGCATTTTACCCGGTTGTGGCCTAGATGATCAGCGAATG
EY900044       --> ..................................................
FD966130       --> ..................................................
EV565424       --> ..................................................
EV565425       --> ..................................................
FD981903       --> ..................................................

               1151   -   1201
UN39302        --> TGGTCGCTCAATGACTAGATTACGTTCACGTTTGCATGTTTATTGGATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570733       <-- TGGTCGCTCAATGACTAGATTACGTTCACGTTTGCATGTTTATTGGATTG
EV570732       <-- TGGTCGCTCAATGACTAGATTACGTTCACGTTTGCATGTTTATTGGATTG
FD977575       <-- TGGTCGCTCAATGACTAGATTACGTTCACGTTTGCATGTTTATTGGATTG
FD961678       <-- TGGTCGCTCAATGACTAGATTACGTTCACGTTTGCATGTTTATTGGATTG
EY895688       <-- TGGTCGCTCAATGACTAGATTACGTTCACGTTTGCATGTTTATTGGATTG
EY900044       --> ..................................................
FD966130       --> ..................................................
EV565424       --> ..................................................
EV565425       --> ..................................................
FD981903       --> ..................................................

               1201   -   1251
UN39302        --> AGACATTATTTCAAAGTTGGGGGTTGAGAGTGCATAGTGTTTACTATGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570733       <-- AGACATTATTTCAAAGTTGGGGGTTGAGAGTGCATAGTGTTTACTATGCT
EV570732       <-- AGACATTATTTCAAAGTTGGGGGTTGAGAGTGCATAGTGTTTACTATGCT
FD977575       <-- AGACATTATTTCAAAGTTGGGGGTTGAGAGTGCATAGTGTTTACTATGCT
FD961678       <-- AGACATTATTTCAAAGTTGGGGGTTGAGAGTGCATAGTGTTTACTATGCT
EY895688       <-- AGACATTATTTCAAAGTTGGGGGTTGAGAGTGCATAGTGTTTACTATGCT
EY900044       --> ..................................................
FD966130       --> ..................................................
EV565424       --> ..................................................
EV565425       --> ..................................................
FD981903       --> ..................................................

               1251   -   1301
UN39302        --> TGTTGTATGTACAATAAGGTCTGTTCATATGTACAATATAATTCAATAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570733       <-- TGTTGTATGTACAATAAGGTCTGTTCATATGTACAATATAATTCAATAAA
EV570732       <-- TGTTGTATGTACAATAAGGTCTGTTCATATGTACAATATAATTCAATAAA
FD977575       <-- TGTTGTATGTACAATAAGGTCTGTTCATATGTACAATATAATTCAATAAG
FD961678       <-- TGTTGTATGTACAATAAGGTCTGTTCATATGTACAATATAATTCAATAAA
EY895688       <-- TGTTGTATGTACAATAAGGTCTGTTCATATGTACAATATAATTCAATAAA
EY900044       --> ..................................................
FD966130       --> ..................................................
EV565424       --> ..................................................
EV565425       --> ..................................................
FD981903       --> ..................................................

               1301   -   1351
UN39302        --> CCACAGACGACAAATTAATAATATATATACATGTTGAACTTAAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV570733       <-- CCACAGACGACAAATTAATAATATATATACATGTTGAACTTAAGG
EV570732       <-- CCACAGACGACAAATTAATAATATATATACATGTTGAACTTAAGG
FD977575       <-- CCACAGACGACAAATTAATAATATATATACATGTTGAACct....
FD961678       <-- CCACAGACGACAAATT.............................
EY895688       <-- CCACAGACGACAAATTAATAATATATATACATGTTGAACTT....
EY900044       --> .............................................
FD966130       --> .............................................
EV565424       --> .............................................
EV565425       --> .............................................
FD981903       --> .............................................