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Alignment for radish unigene UN39486

               1      -     51
UN39486        --> GGATCGCTCGTGAAATCTCCAGAGAAAATGATCCGATTCATATTATTGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911160       <-- ..................................................
EY912581       <-- ..................................................
FD960337       <-- ..................................................
EY915284       --> GGATCGCTCGTGAAATCTCCAGAGAAAATGATCCGATTCATATTATTGCA
EY916987       --> GGATCGCTCGTGAAATCTCCAGAGAAAATGATCCGATTCATATTATTGCA
FD532351       --> ..................................................
FD964273       --> ..................................................
EY900403       --> ..................................................
EX748520       --> ..................................................

               51     -    101
UN39486        --> GAACAGGCAAGGGAAGACTCGGGGAGAGAGAGAGAGATCTGAATCGAAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911160       <-- ....AGGCAAGGGAAGACTCGGGGAGAGAGAGAGAGATCTGAATCGAAAG
EY912581       <-- ..........................................ATCGAAAG
FD960337       <-- ............................................CGAAAG
EY915284       --> GAACAGGCAAGGGAAGACTCGGGGAGAGAGAGAGAGATCTGAATCGAAAG
EY916987       --> GAACAGGCAAGGGAAGACTCGGGGAGAGAGAGAGAGATCTGAATCGAAAG
FD532351       --> ................................gGAGATCTGAATCGAAAG
FD964273       --> ................................gGAGATCTGAATCGAAAG
EY900403       --> ....................................ggCTGAATCGAAAG
EX748520       --> ..................................................

               101    -    151
UN39486        --> AAATTGGGTTACATCTCCGGTCTGATCGCTCGTGAAATCTCCAGAGAATA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911160       <-- AAATTGGGTTACATCTCCGGTCTGATCGCTCGTGAAATCTCCAGAGAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912581       <-- AAATTGGGTTACATCTCCGGTCTGATCGCTCGTGAAATCTCCAGAGAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD960337       <-- AAATTGGGTTACATCTCCGGTCTGATCGCTCGTGAAATCTCCAGAGAATA  Raphanus raphanistrum subsp. maritimus
EY915284       --> AAATTGGGTTACATCTCCGGTCTGATCGCTCGTGAAATCTCCAGAGAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916987       --> AAATTGGGTTACATCTCCGGTCTGATCGCTCGTGAAATCTCCAGAGAAAA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532351       --> AAATTGGGTTACATCTCCGGTCTGATCGCTCGTGAAATCTCCAGAGAATA  Raphanus raphanistrum subsp. maritimus
FD964273       --> AAATTGGGTTACATCTCCGGTCTGATCGCTCGTGAAATCTCCAGAGAATA  Raphanus raphanistrum subsp. maritimus
EY900403       --> AAATTGGGTTACATCTCCGGTCTGATCGCTCGTAAAATCTCCAGAGAATA  Raphanus raphanistrum subsp. maritimus
EX748520       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               151    -    201
UN39486        --> TGATCCGATTCATATTATTGCAGAACAGGCAAGGGAAGACTCGTCTTGCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911160       <-- TGATCCGATTCATATTATTGCAGAACAGGCAAGGGAAGACTCGGCTTGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912581       <-- TGATCCGATTCATATTATTGCAGAACAGGCAAGGGAAGACTCGGCTTGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD960337       <-- TGATCCGATTCATATTATTGCAGAACAGGCAAGGGAAGACTCGTCTTGCC  Raphanus raphanistrum subsp. maritimus
EY915284       --> TGATCCGATTCATATTATTGCAGAACAGGCAAGGGAAGACTCGGCTTGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916987       --> TGATCCGATTCATATTATTGCAGAACAGGCAAGGGAAGACTCGGCTTGCC  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532351       --> TGATCCGATTCATATTATTGCAGAACAGGCAAGGGAAGACTCGTCTTGCC  Raphanus raphanistrum subsp. maritimus
FD964273       --> TGATCCGATTCATATTATTGCAGAACAGGCAAGGGAAGACTCGTCTTGCC  Raphanus raphanistrum subsp. maritimus
EY900403       --> TGATCCGATTCATATTATTGCAGAACAGGCAAGGGAAGACTCGTCTTGCC  Raphanus raphanistrum subsp. maritimus
EX748520       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               201    -    251
UN39486        --> AAGTACTATGTCCCTCTCGAAGAATCCGAGAAACACAAAGTCGAATACGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911160       <-- AAGTACTATGTCCCTCTCGAAGAATCCGAGAAACACAAAGTCGAATACGA
EY912581       <-- AAGTACTATGTCCCTCTCGAAGAATCCGAGAAACACAAAGTCGAATACGA
FD960337       <-- AAGTACTATGTCCCTCTCGAAGAATCCGAGAAACACAAAGTCGAATTCGA
EY915284       --> AAGTACTATGTCCCTCTCGAAGAATCCGAGAAACACAAAGTCGAATACGA
EY916987       --> AAGTACTATGTCCCTCTCGAAGAATCCGAGAAACACAAAGTCGAATACGA
FD532351       --> AAGTACTATGTCCCTCTCGAAGAATCCGAGAAACACAAAGTCGAATACGA
FD964273       --> AAGTACTATGTCCCTCTCGAAGAATCCGAGAAACACAAAGTCGAATTCGA
EY900403       --> AAGTACTATGTCCCTCTCGAGGAATCCGAGAAACACAAAGTCGAATACGA
EX748520       --> ..................................................

               251    -    301
UN39486        --> GGTTCATAGGTTAGTGGTGAACCGCGACGCAAAATTCACCAATTTCGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911160       <-- GGTTCATAGGTTAGTGGTGAACCGCGACGCAAAATTCACCAATTTCGTTG
EY912581       <-- GGTTCATAGGTTAGTGGTGAACCGCGACGCAAAATTCACCAATTTCGTTG
FD960337       <-- GGTTCATAGGTTAGTGGTGAACCGCGACGCAAAATTCACCAATTTCGTTG
EY915284       --> GGTTCATAGGTTAGTGGTGAACCGCGACGCAAAATTCACCAATTTCGTTG
EY916987       --> GGTTCATAGGTTAGTGGTGAACCGCGACGCAAAATTCACCAATTTCGTTG
FD532351       --> GGTTCATAGGTTAGTGGTGAACCGCGACGCAAAATTCACCAATTTCGTTG
FD964273       --> GGTTCATAGGTTAGTGGTGAACCGCGACGCAAAATTCACCAATTTCGTTG
EY900403       --> GGTTCATAGGTTAGTGGTGAACCGCGACGCAAAATTCACCAATTTCGTTG
EX748520       --> ..................................................

               301    -    351
UN39486        --> AGTTTAGAACACACAAGGTGATATACAGGCGTTACGCTGGACTGTTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911160       <-- AGTTTAGAACACACAAGGTGATATACAGGCGTTACGCTGGACTGTTCTTC
EY912581       <-- AGTTTAGAACACACAAGGTGATATACAGGCGTTACGCTGGACTGTTCTTC
FD960337       <-- AGTTTAGAACACACAAGGTGATATACAGGCGTTACGCTGGACTGTTTTTC
EY915284       --> AGTTTAGAACACACAAGGTGATATACAGGCGTTACGCTGGACTGTTCTTC
EY916987       --> AGTTTAGAACACACAAGGTGATATACAGGCGTTACGCTGGACTGTTCTTC
FD532351       --> AGTTTAGAACACACAAGGTGATATACAGGCGTTACGCTGGACTGTTCTTC
FD964273       --> AGTTTAGAACACACAAGGTGATATACAGGCGTTACGCTGGACTGTTCTTC
EY900403       --> AGTTTAGAACACACAAGGTGATATACAGGCGTTACGCTGGACTGTTCTTC
EX748520       --> ..................................................

               351    -    401
UN39486        --> TCCGTGTGCGTGGATATAACGGACAATGAGTTGGCTTACCTTGAGTGCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911160       <-- TCCGTGTGCGTGGATATAACGGACAACGAGTTGGCTTACCTTGAGTGCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912581       <-- TCCGTGTGCGTGGATATAACGGACAACGAGTTGGCTTACCTTGAGTGCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD960337       <-- TTCGTGTGCGTGGATATAACGGACAATGAGTTGGCTTACCTTGAGTGCAT  Raphanus raphanistrum subsp. maritimus
EY915284       --> TCCGTGTGCGTGGATATAACGGACAACGAGTTGGCTTACCTTGAGTGCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916987       --> TCCGTGTGCGTGGATATAACGGACAACGAGTTGGCTTACCTTGAGTGCAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532351       --> TCCGTGTGCGTGGATATAACGGACAATGAGTTGGCTTACCTTGAGTGCAT  Raphanus raphanistrum subsp. maritimus
FD964273       --> TTCGTGTGCGTGGATATAACGGACAATGAGTTGGCTTACCTTGAGTGCAT  Raphanus raphanistrum subsp. maritimus
EY900403       --> TCCGTGTGCGTGGATATAACGGACAATGAGTTGGCTTACCTTGAGTGCAT  Raphanus raphanistrum subsp. maritimus
EX748520       --> ..................................................  Raphanus raphanistrum subsp. maritimus

               401    -    451
UN39486        --> CCATTTGTTTGTGGAGATTTTGGATCATTTCTTCAGCAATGTCTGTGAGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911160       <-- CCATTTGTTTGTGGAGATTTTGGATCATTTCTTCAGCAATGTCTGTGAGC
EY912581       <-- CCATTTGTTTGTGGAGATTTTGGATCATTTCTTCAGCAATGTCTGTGAGC
FD960337       <-- CCATTTGTTTGTGGAGATTTTGGATCATTTCTTCAGCAATGTCTGTGAGC
EY915284       --> CCATTTGTTTGTGGAGATTTTGGATCATTTCTTCAGCAATGTCTGTGAGC
EY916987       --> CCATTTGTTTGTGGAGATTTTGGATCATTTCTTCAGCAATGTCTGTGAGC
FD532351       --> CCATTTGTTTGTGGAGATTTTGGATCATTTCTTCAGCAATGTCTGTGATC
FD964273       --> CCATTTGTTTGTGGAGATTTTGGATCATTTCTTCAGCAATGTCTGTGAGC
EY900403       --> CCATTTGTTTGTGGAGATTTTGGATCATTTCTTCAGCAATGTCTGTGAGC
EX748520       --> ...........................TTTCTTCAGCAATGTCTGTGAGC

               451    -    501
UN39486        --> TTGATCTCGTCTTCAACTTCCACAAGGTGTACTTGATACTTGATGAATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911160       <-- TTGATCTCGTCTTCAACTTCCACAAGGTGTACTTGATACTTGATGAATTC
EY912581       <-- TTGATCTCGTCTTCAACTTCCACAAGGTGTACTTGATACTTGATGAATTC
FD960337       <-- TTGATCTCGTCTTCAACTTCCACAAGGTGTACTTGATACTTGATGAATTC
EY915284       --> TTGATCTCGTCTTCAACTTCCACAAGGTGTACTTGATACTTGATGAATTC
EY916987       --> TTGATCTCGTCTTCAACTTCCACAAGGTGTACTTGATACTTGATGAATTC
FD532351       --> TTGATCTCGTCTTCAACTTCCACAAGGTGTACTTGATACTTGATGAATTC
FD964273       --> TTGATCTCGTCTTCAACTTCCACAAGGTGTACTTGATACTTGATGAATTC
EY900403       --> TTGATCTCGTCTTCAACTTCCACAAGGTGTACTTGATACTTTATGAATTC
EX748520       --> TTGATCTCGTCTTCAACTTCCACAAGGTGTACTTGATACTTGATGAATTC

               501    -    551
UN39486        --> ATTCTTGCTGGAGAGCTCCAAGAAACCAGTAAAAGGGCGATCATCGAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911160       <-- ATTCTTGCTGGAGAGCTCCAAGAAACCAGCAAAAGGGCGATCATCGAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912581       <-- ATTCTTGCTGGAGAGCTCCAAGAAACCAGCAAAAGGGCGATCATCGAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD960337       <-- ATTCTTGCTGGAGAGCTCCAAGAAACCAGTAAAAGGGCGATCATCGAGAG  Raphanus raphanistrum subsp. maritimus
EY915284       --> ATTCTTGCTGGAGAGCTCCAAGAAACCAGCAAAAGGGCGATCATCGAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916987       --> ATTCTTGCTGGAGAGCTCCAAGAAACCAGCAAAAGGGCGATCATCGAGAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532351       --> ATTCTTGCTGGAGAGCTCCAAGAAACCAGTAAAAGGGCTATCATCGAGAG  Raphanus raphanistrum subsp. maritimus
FD964273       --> ATTCTTGCTGGAGAGCTCCAAGAAACCAGTAAAAGGGCGATCATCGAGAG  Raphanus raphanistrum subsp. maritimus
EY900403       --> ATTCTTGCTGGAGAGCTCCAAGAAACCAGTAAAAGGGCGATCATCGAGAG  Raphanus raphanistrum subsp. maritimus
EX748520       --> ATTCTTGCTGGAGAGCTCCAAGAAACCAGTAAAAGGGCGATCATCGAGAG  Raphanus raphanistrum subsp. maritimus

               551    -    601
UN39486        --> GATGTCAGAGCTCGAGAAGCTAGAGTGATATGATTGTTTCTCAAAAAGCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911160       <-- GATGTCAGAGCTTGAGAAGCTAGAGTGATATGATTGTTTCTCAAAAAGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912581       <-- GATGTCAGAGCTTGAGAAGCTAGAGTGATATGATTGTTTCTCAAAAAGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD960337       <-- GATGTCAGAGCTCGAGAAGCTAGAGTGATATGATTGTTTCTCAAAAAGCT  Raphanus raphanistrum subsp. maritimus
EY915284       --> GATGTCAGAGCTTGAGAAGCTAGAGTGATATGATTGTTTCTCAAAAAGCT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916987       --> GATGTCAGAGCTTGAGAAGCTAGAGTGATATGATTGTTTCTCAAAAA...  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532351       --> GATGTCAGAGCTCGAGAAGCTAGAGTGATATGATTGTTTCTCAAAAAGCT  Raphanus raphanistrum subsp. maritimus
FD964273       --> GATGTCAGAGCTCGAGAAGCTAGAGTGATATGATTGTTTCTCAAAAAGCT  Raphanus raphanistrum subsp. maritimus
EY900403       --> GATGTCAGAGCTCGAGAAGCTAGAGTGATATGATTGTTTCTCAAAAAGCT  Raphanus raphanistrum subsp. maritimus
EX748520       --> GATGTCAGAGCTCGAGAAGCTAGAGTGATATGATTGTTTCTCAAAAAGCT  Raphanus raphanistrum subsp. maritimus

               601    -    651
UN39486        --> GGGGTTATTGTTTAACATGTTTTGGTCATTCTTTTCCTTGGCGTGTCCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911160       <-- GGGGTTATTGTTTAACATGTTTTGGTCTTTCTTTTCCTTGGCGTGTCCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY912581       <-- GGGGTTATTGTTTAACATGTTTTGGTCTTTCTTTTCCTTGGCGTGTCCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
FD960337       <-- GGGGTTATTGTTTAACATGTTTTGGTCATTCTTTTCCTTGGCGTGTCCAG  Raphanus raphanistrum subsp. maritimus
EY915284       --> GGGGTTATTGTTTAACATGTTTTGGTCTTTCTTTTCCTTGGCGTGTCCAG  Raphanus raphanistrum subsp. raphanistrum (NY)
EY916987       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532351       --> GGGGTTATTGTTTAACATGTTTTGGTCATTCTTTTCCTTGGCGTGTCCAG  Raphanus raphanistrum subsp. maritimus
FD964273       --> GGGGTTATTGTTTAACATGTTTTGGTCATTCTTTTCCTTGGCGTGTCCAG  Raphanus raphanistrum subsp. maritimus
EY900403       --> GGGGTTATTGTTTAACATGTTTTGGTCATTCTTTTCCTTGGCGTGTCCAG  Raphanus raphanistrum subsp. maritimus
EX748520       --> GGGGTTATTGTTTAACATGTTTTGGTCATTCTTTTCCTTGGCGTGTCCAG  Raphanus raphanistrum subsp. maritimus

               651    -    701
UN39486        --> AGATTTGATATTCTTTGTTGAGTTGAAGACGACAATGGTGATGTTAAGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911160       <-- AGATTTGATATTCTTTGTTGAGTTGAAGACGACAATGGTGATGTTAAGAT
EY912581       <-- AGATTTGATATTCTTTGTTGAGTTGAAGACGACAATGGTGATGTTAAGAT
FD960337       <-- AGATTTGATATTCTTTGTTGAGTTGAAGACGACAATGGTGATGTTAAGAT
EY915284       --> AGATTTGATATTCTTTGTTGAGTTGAAGACGACAATGGTGATGTTAAGAT
EY916987       --> ..................................................
FD532351       --> AGATTTGATATTCTTTGTTGAGTTGAAGACGACAATGGTGATGTTAAGAT
FD964273       --> AGATTTGATATTCTTTGTTGAGTTGAAGACGACAATGGTGATGTTAAGAT
EY900403       --> AGATTTGATATTCTTTGTTGAGTTGAAGACGACAATGGTGATGTTAAGAT
EX748520       --> AGATTTGATATTCTTTGTTGAGTTGAAGACGACAATGGTGATGTTAAGAT

               701    -    751
UN39486        --> TATTTGTAAAAGGATATGAAACGATTCTGTTGAGTTCTCTATCCAAAATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911160       <-- TATTTGTAAAAGGATATAAAACGATTCTGTTGAGatc.............
EY912581       <-- TATTTGTAAAAGGATATAAAACGATTCTGTTGAGatc.............
FD960337       <-- TATTTGTAAAAGGATATGAAACGATTCTGTTGAGTTCTCTATCCAAAATT
EY915284       --> TATTTGTA..........................................
EY916987       --> ..................................................
FD532351       --> TATTTGTA..........................................
FD964273       --> TATTTGTAAAAGGATATGAAACGATTCTGTTGAGTTCTCTATCCAAAATT
EY900403       --> TATTTGTAAAAGGATATGAAACGATTCTGTTGAGTTCTCTATCCAAAATT
EX748520       --> TATTTGTAAAAG-ATATGAAACGATTCTGTTGAGT-CTCTATCCAAA-TT

               751    -    801
UN39486        --> TGCTTTATGTAAGATTTTCTTTCAACTAGTGAGGTTACTTGCTAGTTACC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY911160       <-- ..................................................
EY912581       <-- ..................................................
FD960337       <-- TGCTTTATGg........................................
EY915284       --> ..................................................
EY916987       --> ..................................................
FD532351       --> ..................................................
FD964273       --> TGCTTTATGg........................................
EY900403       --> TGCTTTATGTAAGATTTTCTTTCAACTAGTGAGGTTACTTGCTAGTTACC
EX748520       --> TGCTTTATGTAAGATTTTCTTTC...........................

               801    -    851
UN39486        --> ACAGCCAT
                   ~~~~~~~~
EY911160       <-- ........
EY912581       <-- ........
FD960337       <-- ........
EY915284       --> ........
EY916987       --> ........
FD532351       --> ........
FD964273       --> ........
EY900403       --> ACAGCCAT
EX748520       --> ........