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Alignment for radish unigene UN39544

               1      -     51
UN39544        --> CCAGGTGTTGCCGGGGACGATCGAGCCATGGTGCACGTCGAGCGCTGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433458       <-- ..................................................
FD937402       <-- ..................................................
FY447410       --> CCAGGTGTTGCCGGGGACGATCGAGCCATGGTGCACGTCGAGCGCTGTTG
FY428279       --> ..................................................
FY435623       --> ..................................................
FD556293       --> ..................................................
FY454598       --> ..................................................
FD958004       --> ..................................................
FD941859       --> ..................................................
FY442198       --> ..................................................
EY916382       --> ..................................................

               51     -    101
UN39544        --> GATCCCTAAAAGGAAGCTTGACGATCGTGGATGAGCGTACGGGGAAGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433458       <-- ..................................................
FD937402       <-- ..................................................
FY447410       --> GATCCCTAAAAGGAAGCTTGACGATCGTGGATGAGCGTACGGGGAAGAAG
FY428279       --> ..................................................
FY435623       --> ..................................................
FD556293       --> ..................................................
FY454598       --> ..................................................
FD958004       --> ..................................................
FD941859       --> ..................................................
FY442198       --> ..................................................
EY916382       --> ..................................................

               101    -    151
UN39544        --> TATCAGGTCCCAGTCTCAGAGGATGGCACCGTTAAAGCCGTTGATCTGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433458       <-- ..................................................
FD937402       <-- ..................................................
FY447410       --> TATCAGGTCCCAGTCTCAGAGGATGGCACCGTTAAAGCCGTTGATCTGAA
FY428279       --> ..................................................
FY435623       --> ..................................................
FD556293       --> ..................................................
FY454598       --> ..................................................
FD958004       --> ..................................................
FD941859       --> ..................................................
FY442198       --> ..................................................
EY916382       --> ..................................................

               151    -    201
UN39544        --> GAAGATAACGACGGGGAAGGATGACAAGGGACTTAAGTTATACGATCCAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433458       <-- ..................................................
FD937402       <-- ..................................................
FY447410       --> GAAGATAACGACGGGGAAGGATGACAAGGGACTTAAGTTATACGATCCAG
FY428279       --> .....................................TTATACGATCCAG
FY435623       --> ..................................................
FD556293       --> ..................................................
FY454598       --> ..................................................
FD958004       --> ..................................................
FD941859       --> ..................................................
FY442198       --> ..................................................
EY916382       --> ..................................................

               201    -    251
UN39544        --> GCTACTTGAACACGGCTCCTGTTCGATCTTCCATCTCTTACATCGACGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433458       <-- ..................................................
FD937402       <-- ..................................................
FY447410       --> GCTACTTGAACACGGCTCCTGTTCGATCTTCCATCTCTTACATCGACGGA
FY428279       --> GCTACTTGAACACGGCTCCTGTTCGATCTTCCATCTCTTACATCGACGGA
FY435623       --> ..................................................
FD556293       --> ..................................................
FY454598       --> ..................................................
FD958004       --> ..................................................
FD941859       --> ..................................................
FY442198       --> ..................................................
EY916382       --> ..................................................

               251    -    301
UN39544        --> GATGAAGGGATCCTGCGTTACCGTGGGTACCCTATCGAGGAGTTGGCTGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433458       <-- ..................................................
FD937402       <-- ..................................................
FY447410       --> GATGAAGGGATCCTGCGTTACCGTGGGTACCCTATCGAGGAGTTGGCTGA
FY428279       --> GATGAAGGGATCCTGCGTTACCGTGGGTACCCTATCGAGGAGTTGGCTGA
FY435623       --> ..................................................
FD556293       --> ..................................................
FY454598       --> ..................................................
FD958004       --> ..................................................
FD941859       --> ..................................................
FY442198       --> ..................................................
EY916382       --> ..................................................

               301    -    351
UN39544        --> GAGCAGCACTTTCATTGAGGTTTCTTATCTCCTCATGTATGGGAATCTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433458       <-- ..................................................
FD937402       <-- ..................................................
FY447410       --> GAGCAGCACTTTCATTGAGGTTTCTTATCTCCTCATGTATGGGAATCTAC
FY428279       --> GAGCAGCACTTTCATTGAGGTTTCTTATCTCCTCATGTATGGGAATCTAC
FY435623       --> ..................................................
FD556293       --> ..................................................
FY454598       --> ..................................................
FD958004       --> ..................................................
FD941859       --> ..................................................
FY442198       --> ..................................................
EY916382       --> ..................................................

               351    -    401
UN39544        --> CATCTCAAAAACAGCTAGCTGATTGGGAGTTTACTATTTCTCAGCATTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433458       <-- ..................................................
FD937402       <-- ..................................................
FY447410       --> CATCTCAAAAACAGCTAGCTGATTGGGAGTTTACTATTTCTCAGCATTCA
FY428279       --> CATCTCAAAAACAGCTAGCTGATTGGGAGTTTACTATTTCTCAGCATTCA
FY435623       --> ..................................................
FD556293       --> ..................................................
FY454598       --> ..................................................
FD958004       --> ..................................................
FD941859       --> ..................................................
FY442198       --> ..................................................
EY916382       --> ..................................................

               401    -    451
UN39544        --> GCTGTCCCACAGGGAGTATTGGAGATCATCCAGGCAATGCCTCATGATGC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433458       <-- ..................................................
FD937402       <-- ..................................................
FY447410       --> GCTGTCCCACAGGGAGTATTGGAGATCATCCAGGCAATGCCTCATGATGC
FY428279       --> GCTGTCCCACAGGGAGTATTGGAGATCATCCAGGCAATGCCTCATGATGC
FY435623       --> ............................TCCAGGCAATGCCTCATGATGC
FD556293       --> ..................................................
FY454598       --> ..................................................
FD958004       --> ..................................................
FD941859       --> ..................................................
FY442198       --> ..................................................
EY916382       --> ..................................................

               451    -    501
UN39544        --> ACACCCAATGGGTGTTCTTGTGAGTGCAATGAGTGCACTTTCCATCTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433458       <-- ..................................................
FD937402       <-- ..................................................
FY447410       --> ACACCCAATGGGTGTTCTTGTGAGTGCAATGAGTGCACTTTCCATCTTCC
FY428279       --> ACACCCAATGGGTGTTCTTGTGAGTGCAATGAGTGCACTTTCCATCTTCC
FY435623       --> ACACCCAATGGGTGTTCTTGTGAGTGCAATGAGTGCACTTTCCATCTTCC
FD556293       --> ...........................................gTCTTCC
FY454598       --> ..................................................
FD958004       --> ..................................................
FD941859       --> ..................................................
FY442198       --> ..................................................
EY916382       --> ..................................................

               501    -    551
UN39544        --> ATCCTGATGCCAATCCTGCTCTTAGGGGCCAAGATATTTACAAGTCAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433458       <-- ..................................................
FD937402       <-- ..................................................
FY447410       --> ATCCTGATGCCAATCCTGCTCTTAGGGGCCAAGATATTTACAAGTCAAAA
FY428279       --> ATCCTGATGCCAATCCTGCTCTTAGGGGCCAAGATATTTACAAGTCAAAA
FY435623       --> ATCCTGATGCCAATCCTGCTCTTAGGGGCCAAGATATTTACAAGTCAAAA
FD556293       --> ATCCTGATGCCAATCCTGCTCTTAGGGGCCAAGATATTTACAAGTCAAAA
FY454598       --> ..................................................
FD958004       --> ..................................................
FD941859       --> ..................................................
FY442198       --> ..................................................
EY916382       --> ..................................................

               551    -    601
UN39544        --> CAAGTCCGTGATAAACAGATTGTTCGTATTCTTGGAAAGGCTCCAACAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433458       <-- ..................................................
FD937402       <-- ..................................................
FY447410       --> CAAGTCCGTGATAAACAGATTGTTCGTATTCTTGGAAAGGCTCCAACAAT
FY428279       --> CAAGTCCGTGATAAACAGATTGTTCGTATTCTTGGAAAGGCTCCAACAAT
FY435623       --> CAAGTCCGTGATAAACAGATTGTTCGTATTCTTGGAAAGGCTCCAACAAT
FD556293       --> CAAGTCCGTGATAAACAGATTGTTCGTATTCTTGGAAAGGCTCCAACAAT
FY454598       --> ...GTCCGTGATAAACAGATTGTTCGTATTCTTGGAAAGGCTCCAACAAT
FD958004       --> ..................................................
FD941859       --> ..................................................
FY442198       --> ..................................................
EY916382       --> ..................................................

               601    -    651
UN39544        --> TGCAGCAGCTGCTTATCTGAGGATGGCAGGCAGGCCTCCTGTTCTTCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433458       <-- ..................................................
FD937402       <-- ..................................................
FY447410       --> TGCAGCAGCTGCTTATCTGAGGATGGCAGGCAGGCCTCCTGTTCTTCCTT
FY428279       --> TGCAGCAGCTGCTTATCTGAGGATGGCAGGCAGGCCTCCTGTTCTTCCTT
FY435623       --> TGCAGCAGCTGCTTATCTGAGGATGGCAGGCAGGCCTCCTGTTCTTCCTT
FD556293       --> TGCAGCGGCTGCTTATCTGAGGATGGCAGGCAGGCCTCCTGTTCTTCCTT
FY454598       --> TGCAGCAGCTGCTTATCTGAGGATGGCAGGCAGGCCTCCTGTTCTTCCTT
FD958004       --> ..................................................
FD941859       --> ..................................................
FY442198       --> ..................................................
EY916382       --> ..................................................

               651    -    701
UN39544        --> CTGGCAACCTCTCTTACGCCGAGAATTTCCTCTATATGCTGGATTCAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433458       <-- ..................................................
FD937402       <-- ..................................................
FY447410       --> CTGGCAAC-TCTCTTAC-CCGAGA-TTTCCTCTATATGCTGGA.......
FY428279       --> CTGGCAACCTCTCTTACGCCGAGAATTTCCTCTATATGCTGGATTCAATG
FY435623       --> CTGGCAACCTCTCTTACGCCGAGAATTTCCTCTATATGCTGGATTCAATG
FD556293       --> CTGGCAACCTCTCTTACGCCGAGAATTTCCTCTATATGCTGGATTCAATG
FY454598       --> CTGGCAACCTCTCTTACGCCGAGAATTTCCTCTATATGCTGGATTCAATG
FD958004       --> ..................................................
FD941859       --> ..................................................
FY442198       --> ..................................................
EY916382       --> ..................................................

               701    -    751
UN39544        --> GGCGATAGGTCTTACAAGCCTAATCCTCGTCTGGCTCGAGTGCTTGATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433458       <-- ..................................................
FD937402       <-- ..................................................
FY447410       --> ..................................................
FY428279       --> GGCGATAGGTCTTACAAGCCTAATCCTCGTCTGGCTCGAGTGCTTGATAT
FY435623       --> GGCGATAGGTCTTACAAGCCTAATCCTCGTCTGGCTCGAGTGCTTGATAT
FD556293       --> GGCGATAGGTCTTACAAGCCTAATCCTCGTCTGGCTCGAGTGCTTGATAT
FY454598       --> GGCGATAGGTCTTACAAGCCTAATCCTCGTCTGGCTCGAGTGCTTGATAT
FD958004       --> ..................................................
FD941859       --> ..................................................
FY442198       --> ..................................................
EY916382       --> ..................................................

               751    -    801
UN39544        --> TCTCTTCATACTGCATGCTGAACATGAAATGAACTGCTCTACTGCTGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433458       <-- ..............................................GCTG
FD937402       <-- ..................................................
FY447410       --> ..................................................
FY428279       --> TCTCTTCATACTGCATGCTGAACATGAAATGAACTGCTCTACTGCTGCTG
FY435623       --> TCTCTTCATACTGCATGCTGAACATGAAATGAACTGCTCTACTGCTGCTG
FD556293       --> TCTCTTCATACTGCATGCTGAACATGAAATGAACTGCTCTACTGCTGCTG
FY454598       --> TCTCTTCATACTGCATGCTGAACATGAAATGAACTGCTCTACTGCTGCTG
FD958004       --> ..................................................
FD941859       --> ..................................................
FY442198       --> ..................................................
EY916382       --> ..................................................

               801    -    851
UN39544        --> CTCGTCATCTTGCCTCTAGTGGTGTTGATGTGTACACAGCTGTTGCTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433458       <-- CTCGTCATCTTGCCTCTAGTGGTGTTGATGTGTACACAGCTGTTGCTGGA
FD937402       <-- ..................................................
FY447410       --> ..................................................
FY428279       --> CTCGTCATCTTGCCTCTAGTGGTGTTGATGTGTACACAGCTGTTGCTGGA
FY435623       --> CTCGTCATCTTGCCTCTAGTGGTGTTGATGTGTACACAGCTGTTGCTGGA
FD556293       --> CTCGTCATCTTGCCTCTAGTGGTGTTGATGTGTACACAGCTGTTGCTGGA
FY454598       --> CTCGTCATCTTGCCTCTAGTGGTGTTGATGTGTACACAGCTGTTGCTGGA
FD958004       --> ..................................................
FD941859       --> ..................................................
FY442198       --> ..................................................
EY916382       --> ..................................................

               851    -    901
UN39544        --> GCTGTCGGAGCGCTATATGGTCCACTTCATGGTGGTGCCAACGAGGCTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433458       <-- GCTGTCGGAGCGCTATATGGTCCACTTCATGGTGGTGCCAACGAGGCTGT
FD937402       <-- ..................................................
FY447410       --> ..................................................
FY428279       --> GCTGTCGGAGCGCTATATGGTCCACTTCATGGTGGTGCCAACGAGGCTGT
FY435623       --> GCTGTCGGAGCGCTATATGGTCCACTTCATGGTGGTGCCAACGAGGCTGT
FD556293       --> GCTGTCGGAGCGCTATATGGTCCACTTCATGGTGGTGCCAACGAGGCTGT
FY454598       --> GCTGTCGGAGCGCTATATGGTCCACTTCATGGTGGTGCCAACGAGGCTGT
FD958004       --> ..................................................
FD941859       --> ..................................................
FY442198       --> ..................................................
EY916382       --> ..................................................

               901    -    951
UN39544        --> CCTTAAGATGTTATCAGAGATTGGGAGTGTTGAAAATATCCCAGAGTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433458       <-- CCTTAAGATGTTATCAGAGATTGGGAGTGTTGAAAATATCCCAGAGTTCA
FD937402       <-- ..............................gGAAAATATCCCAGAGTTCA
FY447410       --> ..................................................
FY428279       --> CCTTAAGATGTTATCAGAGATTGGGAGTGTTGAAAATATCCCAGAGTTCA
FY435623       --> CCTTAAGATGTTATCAGAGATTGGGAGTGTTGAAAATATCCCAGAGTTCA
FD556293       --> CCTTAAGATGTTATCATAGATTGGGAGTGTTGAAAATATCCCAGAGTTCA
FY454598       --> CCTTAAGATGTTATCAGAGATTGGGAGTGTTGAAAATATCCCAGAGTTCA
FD958004       --> .............gcgGAGATTGGGAGTGTTGAAAATATCCCAGAGTTCA
FD941859       --> ..............................gGAAAATATCCCAGAGTTCA
FY442198       --> ..................................................
EY916382       --> ..................................................

               951    -   1001
UN39544        --> TAGAAGGCGTGAAGAACAGAAAGAGGAAGATGTCAGGTTTTGGACATCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433458       <-- TAGAAGGCGTGAAGAACAGAAAGAGGAAGATGTCAGGTTTTGGACATCGT
FD937402       <-- TAGAAGGCGTGAAGAACAGAAAGAGGAAGATGTCAGGTTTTGGGCATCGT
FY447410       --> ..................................................
FY428279       --> TAGAAGGCGTGAAGAACAGAAAGAGGAAGATGTCAGGTTTTGGACATCGT
FY435623       --> TAGAAGGCGTGAAGAACAGAAAGAGGAAGATGTCAGGTTTTGGACATCGT
FD556293       --> TAGAAGGCGTGAAGAACAGAAAGAGGAAGATG..................
FY454598       --> TAGAAGGCGTGAAGAACAGAAAGAGGAAGATGTCAGGTTTTGGACATCGT
FD958004       --> TAGAAGGCGTGAAGAACAGAAAGAGGAAGATGTCAGGTTTTGGACATCGT
FD941859       --> TAGAAGGCGTGAAGAACAGAAAGAGGAAGATGTCAGGTTTTGGGCATCGT
FY442198       --> ..................................................
EY916382       --> ..................................................

               1001   -   1051
UN39544        --> GTTTACAAAAACTACGACCCGAGAGCAAAAGTCATCAAGAAACTGGCGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433458       <-- GTTTACAAAAACTACGACCCGAGAGCAAAAGTCATCAAGAAACTGGCGGA
FD937402       <-- GTTTACAAAAACTACGACCCGAGAGCAAAAGTCATCAAGAAACTGGCGGA
FY447410       --> ..................................................
FY428279       --> GTTTACAAAAACTACGACCCGAGAGCAAAAGTCATCA.............
FY435623       --> GTTTACAAAAACTAC-ACCCGAGA..........................
FD556293       --> ..................................................
FY454598       --> GTTTACAAAAACTACGACCCGAGAGCAAAAGTCATCAAGAAACTGGCGGA
FD958004       --> GTTTACAAAAACTACGACCCGAGAGCAAAAGTAATCAAGAAACTGGCGGA
FD941859       --> GTTTACAAAAACTACGACCCGAGAGCAAAAGTCATCAAGAAACTGGCGGA
FY442198       --> ..................................................
EY916382       --> ..................................................

               1051   -   1101
UN39544        --> TGAAGTGTTCTCCATTGTTGGAAGGGATCCTCTTATCGAGGTAGCAGTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433458       <-- TGAAGTGTTCTCCATTGTTGGAAGGGATCCTCTTATCGAGGTAGCAGTTG
FD937402       <-- TGAAGTGTTCTCCATTGTTGGAAGGGATCCTCTAATCGAGGTAGCAGTTG
FY447410       --> ..................................................
FY428279       --> ..................................................
FY435623       --> ..................................................
FD556293       --> ..................................................
FY454598       --> TGAAGTGTTCTCCATTGTTGGAAGGGATCCTCTTATCGAGGTAGCAGTTG
FD958004       --> TGAAGTGTTCTCCATTGTTGGAAGGGATCCTCTTATCGAGGTAGCAGTTG
FD941859       --> TGAAGTGTTCTCCATTGTTGGAAGGGATCCTCTAATCGAGGTAGCAGTTG
FY442198       --> ..................................................
EY916382       --> ..................................................

               1101   -   1151
UN39544        --> CTCTAGAGAAGGCAGCACTCTCTGATGAATATTTTGTGAAGAGAAAGCTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433458       <-- CTCTAGAGAAGGCAGCACTCTCTGATGAATATTTTGTGAAGAGAAAGCTA
FD937402       <-- CTCTAGAGAAGGCAGCACTCTCTGATGAATATTTTGTGAAGAGAAAGCTA
FY447410       --> ..................................................
FY428279       --> ..................................................
FY435623       --> ..................................................
FD556293       --> ..................................................
FY454598       --> CTCTAGAGAAGGCAGCACTCTCTGATGAATATTTTGTGAAGAGAAAGCTA
FD958004       --> CTCTAGAGAAGGCAGCACTCTCTGATGAATATTTTGTGAAGAGAAAACTA
FD941859       --> CTCTAGAGAAGGCAGCACTCTCTGATGAATATTTTGTGAAGAGAAAGCTA
FY442198       --> ................................TTTGTGA-GAGAA-GCTA
EY916382       --> ..................................................

               1151   -   1201
UN39544        --> TACCCAAATGTTGATTTCTACTCTGGAT-TAATCTATAGGGCAATGGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433458       <-- TACCCAAATGTCGATTTCTACTCTGGAT-TAATCTATAGGGCAATGGGAT  Raphanus sativus cv GSK3-1
FD937402       <-- TACCCAAATGTTGATTTCTACTCTGGAT-TAATCTATAGGGCAATGGGAT  Raphanus sativus var. oleiformis
FY447410       --> ..................................................  Raphanus sativus cv GSK3-1
FY428279       --> ..................................................  Raphanus sativus cv GSK3-1
FY435623       --> ..................................................  Raphanus sativus cv GSK3-1
FD556293       --> ..................................................  Raphanus raphanistrum subsp. landra
FY454598       --> TACCCAAATGTCGATTTCTACTCTGGAT-TAATCTATAGGGCAATGGGAT  Raphanus sativus cv GSK3-1
FD958004       --> TACCCAAATGTTGATTTCTACTCTGGAT-TAATCTATAGGGCAATGGGAT  Raphanus sativus cv Rat-Tail Radish #3870
FD941859       --> TACCCAAATGTTGATTTCTACTCTGGAT-TAATCTATAGGGCAATGGGAT  Raphanus sativus var. oleiformis
FY442198       --> TACCCAAATGTCGATTTCTACTCTGGATCTAATCTATAGGGCAATGGGAT  Raphanus sativus cv GSK3-1
EY916382       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               1201   -   1251
UN39544        --> TCCCACCTGAATTCTTCACAGTCCTATTTGCAGTCCCGCGAATGGCTGGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433458       <-- TCCCACCTGAATTCTTCACAGTCCTATTTGCAGTCCCGCGAATGGCTGGA
FD937402       <-- TCCCACCTGAATTCTTCACAGTCCTATTTGCAGTCCCGCGAATGGCTGGA
FY447410       --> ..................................................
FY428279       --> ..................................................
FY435623       --> ..................................................
FD556293       --> ..................................................
FY454598       --> TCCCACCTGAATTCTTCACAGTCCTATTTGCAGTCCCGCGAATGGCTGGA
FD958004       --> TCCCACCTGAATTCTTCACAGTCCTATTTGCAGTCCCGCGTATGGCTGGA
FD941859       --> TCCCACCTGAATTCTTCACAGTCCTATTTGCAGTCCCGCGAATGGCTGGA
FY442198       --> TCCCACCTGAATTCTTCACAGTCCTATTTGCAGTCCCGCGAATGGCTGGA
EY916382       --> ...........................gTGCAGTCCCGCGTATGGCTGGA

               1251   -   1301
UN39544        --> TACTTGTCTCATTGGCGTGAGTCGTTGGATGATCCTGACGCTAAGATCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433458       <-- TACTTGTCTCATTGGCGTGAGTCGTTGGATGATCCTGACGCTAAGATCAT
FD937402       <-- TACTTGTCTCATTGGCGTGAGTCGTTGGATGATCCTGACGCTAAGATCAT
FY447410       --> ..................................................
FY428279       --> ..................................................
FY435623       --> ..................................................
FD556293       --> ..................................................
FY454598       --> TACTTGTCTCATTGGCGTGAGTCGTTGGATGATCCTGACGCTAAGATCAT
FD958004       --> TACTTGTCTCATTGGCGTGAGTCGTTGGATGATCCTGACGCTAAGATCAT
FD941859       --> TACTTGTCTCATTGGCGTGAGTCGTTGGATGATCCTGACGCTAAGATCAT
FY442198       --> TACTTGTCTCATTGGCGTGAGTCGTTGGATGATCCTGACGCTAAGATCAT
EY916382       --> TACTTGTCACACTGGCGTGAGTCGTTGGATGATCCTGACGCTAAGATCAT

               1301   -   1351
UN39544        --> GAGACCCCAACAGGCCTACACTGGGGTGTGGCTAAGGCACTACGAGCCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433458       <-- GAGACCCCAACAGGCCTACACTGGGGTGTGGCTAAGGCACTACGAGCCGG
FD937402       <-- GAGACCCCAACAGGCCTACACTGGGGTGTGGCTAAGGCACTACGAGCCGG
FY447410       --> ..................................................
FY428279       --> ..................................................
FY435623       --> ..................................................
FD556293       --> ..................................................
FY454598       --> GAGACCCCAACAGGCCTACACTGGGGTGTGGCTAAGGCACTACGAGCCGG
FD958004       --> GAGACCCCAACAGGCCTACACTGGGGTGTGGCTAAGGCACTACGAGCCGG
FD941859       --> GAGACCCCAACAGGCCTACACTGGGGTGTGGCTAAGGCACTACGAGCCGG
FY442198       --> GAGACCCCAACAGGCCTACACTGGGGTGTGGCTAAGGCACTACGAGCCGG
EY916382       --> GAGACCCCAACAGGCCTACACTGGGGTGTGGCTAAGGCACTACGAGCCGG

               1351   -   1401
UN39544        --> TGAGAGAAAGAACTTTGTCAAGTGGTTCAGATAAGATGGGTCAAGTTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433458       <-- TGAGAGAAAGAACTTTGTCAAGTGGTTCAGATAAGATGGGTCAAGTTTCC  Raphanus sativus cv GSK3-1
FD937402       <-- TGAGAGAAAGAACTCTGTCAAGTGGTTCAGATAAGATGGGTCAAGTTTCC  Raphanus sativus var. oleiformis
FY447410       --> ..................................................  Raphanus sativus cv GSK3-1
FY428279       --> ..................................................  Raphanus sativus cv GSK3-1
FY435623       --> ..................................................  Raphanus sativus cv GSK3-1
FD556293       --> ..................................................  Raphanus raphanistrum subsp. landra
FY454598       --> TGAGAGAAAGAACTTTGTCAAGTGGTTC......................  Raphanus sativus cv GSK3-1
FD958004       --> TGAGAGAAGGAACTCTGTCAAGTGGTTCAGATAAGATGAGTCAAGTTTCC  Raphanus sativus cv Rat-Tail Radish #3870
FD941859       --> TGAGAGAAAGAACTCTGTCAAGTGGTTCAGATAAGATGGGTCAAGTTTCC  Raphanus sativus var. oleiformis
FY442198       --> TGAGAGAAAGAACTTTGTCAAGTGGTTCAGATAAGATGGGTCAAGTTTCC  Raphanus sativus cv GSK3-1
EY916382       --> TGAGAGAAAGAACTTTGTCAAGTGGTTCAGATAAGATGGGTCAAGTTTCC  Raphanus raphanistrum subsp. raphanistrum (NY)

               1401   -   1451
UN39544        --> ATTTCGAATGCATCAAGAAGGCGTTTATCTGGATCTGCACTTTAAGTCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433458       <-- ATTTCGAATGCATCAAGAAGGCGTTTATCTGGATCTGCACTTTAAGTCTC
FD937402       <-- ATTTCGAATGCATCAAGAAGGCGTTTATCTGGATCTGCACTTTAAGTCTC
FY447410       --> ..................................................
FY428279       --> ..................................................
FY435623       --> ..................................................
FD556293       --> ..................................................
FY454598       --> ..................................................
FD958004       --> ATTTCGAATGCATCAAGAAGGCGTTTATCTGGATCTGCACTTTAAGTCTC
FD941859       --> ATTTCGAATGCATCAAGAAGGCGTTTATCTGGATCTGCACTTTAAGTCTC
FY442198       --> ATTTCGAATGCATCAAGAAGGCGTTTATCTGGATCTGCACTTTAAGTCTC
EY916382       --> ATTTCGAATGCATCAAGAAGGCGTTTATCTGGATCTGCACTTTAAGTCTC

               1451   -   1501
UN39544        --> AAACTCTACTACTACATACGAATAAAGACAGAAGACACCTCTTCTCAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433458       <-- AAACTCTACTACTACATACGAATAAAGACAGAAGACACCTCTTCTCAACA
FD937402       <-- AAACTCTACTACTACATACGAATAAAGACAGAAGACACCTCTTCTCAACA
FY447410       --> ..................................................
FY428279       --> ..................................................
FY435623       --> ..................................................
FD556293       --> ..................................................
FY454598       --> ..................................................
FD958004       --> AAACTCTACTACTACATACGAATAAAGACAGAAGACACCTCTTCTCAACA
FD941859       --> AAACTCTACTACTACATACGAATAAAGACAGAAGACACCTCTTCTCAACA
FY442198       --> AAACTCTACTACTACATACGAATAAAGACAGAAGACACCTCTTCTCAACA
EY916382       --> AAACTCTACTACTACATACGAATAAAGACAGAAGACACCTCTTCTCAACA

               1501   -   1551
UN39544        --> TTCTTTGTTGTTTCCATTCTCTTAAAAACTCAATAATCCATTCCAGTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433458       <-- TTCTTTGTTGTTTCCATTCTCTTAAAAACTCAATAATCCATTCCAGTTTA
FD937402       <-- TTCTTTGTTGTTTCCATTCTCTTAAAAACTCAATAATCCATTCCAGTTTA
FY447410       --> ..................................................
FY428279       --> ..................................................
FY435623       --> ..................................................
FD556293       --> ..................................................
FY454598       --> ..................................................
FD958004       --> TTCTTTGTTGTTTCCATTCTCTTAAAAACTCAATAATCCATTCCAGTTTA
FD941859       --> TTCTTTGTTGTTTCCATTCTCTTAAAAACTCAATAATCCATTCCAGTTTA
FY442198       --> TTCTTTGTTGTTTCCATTCTCTTAAAAACTCAATAATCCATTCCAGTTTA
EY916382       --> TTCTTTGTTGTTTCCATTCTCTTAAAAACTCAATAATCCATTCCAGTTTA

               1551   -   1601
UN39544        --> CTGCATTATGTGTCTGTTATTTTGTACTTGATGATTTAAAACATATTTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433458       <-- CTGCATTATGTGTCTGTTATTTTGTACTTGATGATTTAAAACATATTTCA
FD937402       <-- CTGCATTATGTGTCTGTTATTTTGTACTTGATGATTTAAAACATATTTCA
FY447410       --> ..................................................
FY428279       --> ..................................................
FY435623       --> ..................................................
FD556293       --> ..................................................
FY454598       --> ..................................................
FD958004       --> CTGCATTATGTGTCTGTTATTTTGTACTTGATGATTTAAAACATAATTCA
FD941859       --> CTGCATTATGTGTCTGTTATTTTGTACTTGATGATTTAAAACATATTTCA
FY442198       --> CTGCATTATGTGTCTGTTATTTTGTACTTGATGATTTAAAACATATTTCA
EY916382       --> CTGCATTATGTGTCTGTTATTTTGTACTTTATGATTTAAAACATATTTCA

               1601   -   1651
UN39544        --> TACTTCCATTTAATAACAATGTCTTAACAGGGAAAGACATACGTGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FY433458       <-- TACTTCCAT.......................................
FD937402       <-- TACTTCCATTTAATAACAATGTCTTAACAGGGcg..............
FY447410       --> ................................................
FY428279       --> ................................................
FY435623       --> ................................................
FD556293       --> ................................................
FY454598       --> ................................................
FD958004       --> TACTTCC.........................................
FD941859       --> TACTTCCATTTAATAACAATGTCTTAACAGGcga..............
FY442198       --> TACTTCCATTTAATAACAATGTCTTAACAGGGAAAGACATACGTGTTC
EY916382       --> TACTTCCATTTAATAACAATGTCTTAACAGGGAAAGACATACGTGTTC