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Alignment for radish unigene UN39758

               1      -     51
UN39758        --> GGGTGCGTTTCCAAGCCACTGGACTCCCTTGCCGTCGCTTCCAGTTGGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959779       <-- ..................................................
FD544381       <-- ..................................................
EV544103       <-- ..................................................
EY948248       --> GGGTGCGTTTCCAAGCCACTCTACTCCCTTGCCGTCGCTTCCAGTTGGTC
EX905503       --> ....................GGACTCCCTTGCCGTCGCTTCCAGTTGGTC
FD540493       --> ....................GGACTCCCTTGCCGTCGCTTCCAGTTGGTC
FD548158       --> .............................gGCCGTCGCTTCCAGTTGGTC
FD963477       --> ............................ggGCCGTCGCTTCC-GTTGGTC
EX771531       --> ..................................................
EV529103       --> ..................................................

               51     -    101
UN39758        --> AGGAACTTATTCGGAGAACAACAATGGCCACTCAAGCTGCCTCATTCACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959779       <-- ................................................CT
FD544381       <-- ..................................................
EV544103       <-- ..................................................
EY948248       --> AGGAACTTATTCGGAGAACAACAATGGCCACTCAAGCTGCCTCATTCACT
EX905503       --> AGGAACTTATTCGGAGAACAACAATGGCCACTCAAGCTGCCTCATTCACT
FD540493       --> AGGAACT-ATTCGGAGAACAACAATGGCCACTCAAGCTGCCTCATTCACT
FD548158       --> AGGAACTTATTCGGCGAACAACAATGGCCACTCAAGCTGCCTCATTCACT
FD963477       --> AGGAACTTATTCGGAGAACAACAATGGCCACTCAAGCTGCCTCATTCACT
EX771531       --> ...........................CCACTCAAGCTGCCTCATTCACT
EV529103       --> ..................................................

               101    -    151
UN39758        --> GGCAACTTAAAGAAAGCTGTGGCGGGTATAAAGCGTATCAATCTCGACGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959779       <-- GGCAACTTAAAGAAAGCTGTGGCGGGTATAAAGCGTATCAATCTCGACGG
FD544381       <-- ..................................................
EV544103       <-- ..................................................
EY948248       --> GGCAACTTAAAGAAAGCTGTGGCGGGTATAAAGCGTATCAATCTCGACGG
EX905503       --> GGCAACTTAAAGAAAGCTGTGGCGGGTATAAAGCGTATCAATCTCGACGG
FD540493       --> GGCAACTTAAAGAAAGCTGTGGCGGGTATAAAGCGTATCAATCTCGACGA
FD548158       --> GGCAACTTAAAGAAAGCTGTGGCGGGTATAAAGCGTATCAATCTCGACGG
FD963477       --> GGCAACTTAAAGAAAGCTGTGGCGGGTATAAAGCGTATCAATCTCGACGG
EX771531       --> GGCAACTTAAAGAAAGCTGTGGCGGGTATAAAGCGTATCAATCTCGACGG
EV529103       --> ..................................................

               151    -    201
UN39758        --> TCTTCGTTGGCGAGTTTTTGATGCCAAAGGCCAGGTACTGGGTAGACTAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959779       <-- TCTTCGTTGGCGAGTTTTTGATGCCAAAGGCCAGGTACTGGGTAGACTAG
FD544381       <-- ..............TTTTTGATGTCAAAGGCCAGGTACTGGGTAGACTAG
EV544103       <-- ........................CAAAGGCCAGGTACTGGGTAGACTAG
EY948248       --> TCTTCGTTGGCGAGTTTTTGATGCCAAAGGCCAGGTACTGGGTAGACTAG
EX905503       --> TCTTCGTTGGCGAGTTTTTGATGCCAAAGGCCAGGTACTGGGTAGACTAG
FD540493       --> TCTTCGTTGGCGAGTTTTTGATGCCAAAGGCCAGGTACTGGGTAGACTAG
FD548158       --> TCTTCGTTGGCGAGTTTTTGATGTCAAAGGCCAGGTACTGGGTAGACTAG
FD963477       --> TCTTCGTTGGCGAGTTTTTGATGCCAAAGGCCAGGTACTGGGTAGACTAG
EX771531       --> TCTTCGTTGGCGAGTTTTTGATGCCAAAGGCCAGGTACTGGGTAGACTAG
EV529103       --> ..................................................

               201    -    251
UN39758        --> CATCTCAGATATCAACAGTGCTTCAAGCCAAAGATAAGCCTACTTATTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959779       <-- CATCTCAGATATCAACAGTGCTTCAAGCCAAAGATAAGCCTACTTATTGT
FD544381       <-- CATCTCAGATATCAACAGTGCTTCAAGCCAAAGATAAGCCTACTTATTGT
EV544103       <-- CATCTCAGATATCAACAGTGCTTCAAGCCAAAGATAAGCCTACTTATTGT
EY948248       --> CATCTCAGATATCAACTGTGCTTCAAGCCAAAGATAAGCCTACTTATTGT
EX905503       --> CATCTCAGATATCAACTGTGCTTCAAGCCAAAGATAAGCCTACTTATTGT
FD540493       --> CATCTCAGATATCAACAGTGCTTCAAGCCAAAGATAAGCCTACTTATTGT
FD548158       --> CATCTCAGATATCAACAGTGCTTCAAGCCAAAGATAAGCCTACTTATTGT
FD963477       --> CATCTCAGATATCAACAGTGCTTCAAGCCAAAGATAAGCCTACTTATTGT
EX771531       --> CATCTCAGATATCAACAGTGCTTCAAGCCAAAGATAAGCCTACTTATTGT
EV529103       --> ................................GATAAGCCTACTTATTGT

               251    -    301
UN39758        --> CCCAACCGCGACGATGGCGATATTTGCATTGTTCTCAATGCTAAGGATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959779       <-- CCCAACCGCGACGATGGCGATATTTGCATTGTTCTCAATGCTAAGGATAT
FD544381       <-- CCCAACCGCGACGATGGCGATATTTGCATTGTTCTCAATGCTGAGGATAT
EV544103       <-- CCCAACCGCGACGATGGCGATATTTGCATTGTTCTCAATGCTAAGGATAT
EY948248       --> CCCAACCGCGACGATGGCGATATTTGCATTGTTCTCAATGCTAAGGATAT
EX905503       --> CCCAACCGCGACGATGGCGATATTTGCATTGTTCTCAATGCTAAGGATAT
FD540493       --> CCCAACCGCGACGATGGCGATATTTGCATTGTTCTCAATGCTAAGGATAT
FD548158       --> CCCAACCGCGACGATGGCGATATTTGCATTGTTCTCAATGCTGAGGATAT
FD963477       --> CCCAACCGCGACGATGGCGATATTTGCATTGTTCTCAATGCTAAGGATAT
EX771531       --> TCCAACCGCGACGATGGCGATATTTGCATTTTTCTCAATGCTAAGGATAT
EV529103       --> CCCAACCGCGACGATGGCGATATTTGCATTGTTCTCAATGCTAAGGATAT

               301    -    351
UN39758        --> CGGCATCACTGGTAGAAAGCTCACTGACAAGTTCTACCGCTGGCACACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959779       <-- CGGCATCACTGGTAGAAAGCTCACTGACAAGTTCTACCGCTGGCATACCG
FD544381       <-- CGGCATCACTGGTAGAAAGCTCACTGACAAGTTCTACCGCTGGCACACCG
EV544103       <-- CGGCATCACTGGTAGAAAGCTCACTGACAAGTTCTACCGCTGGCACACCG
EY948248       --> CGGCATCACTGGTAGAAAGCTCACTGACAAGTTCTACCGCTGGCATACCG
EX905503       --> CGGCATCACTGGTAGAAAGCTCACTGACAAGTTCTACCGCTGGCATACCG
FD540493       --> CGGCATCACTGGTAGAAAGCTCACTGACAAGTTCTACCGCTGGCACACCG
FD548158       --> CGGCATCACTGGTAGAAAGCTCACTGACAAGTTCTACCGCTGGCACACCG
FD963477       --> CGGCATCACTGGTAGAAAGCTCACTGACAAGTTCTACCGCTGGCATACCG
EX771531       --> CGGCATCACTGGTAGAAAGCTCACTGACAAGTTCTACCGCTGGCACACCG
EV529103       --> CGGCATCACTGGTAGAAAGCTCACTGACGAGTTCTACCGCTGGCACACCG

               351    -    401
UN39758        --> GATATGTTGGACACCTGAAAGAACGGAGTCTGAAAGATCAGATGGCCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959779       <-- GATATGTTGGACACCTGAAAGAACGGAGTTTGAAAGATCAGATGGCCAAA
FD544381       <-- GATATGTTGGACACCTGAAAGAACGGAGTCTGAAAGATCAGATGGCCAAA
EV544103       <-- GATATGTTGGACACCTGAAAGAACGGAGTCTGAAAGATCAGATGGCCAAA
EY948248       --> GATATGTTGGACACCTGAAAGAACGGAGTCTGAAAGATCAGATGGCCAAA
EX905503       --> GATATGTTGGACACCTGAAAGAACGGAGTCTGAAAGATCAGATGGCCAAA
FD540493       --> GATATGTTGGACACCTGAAAGAACGGAGTCTGAAAGATCAGATGGCCAAA
FD548158       --> GATATGTTGGACACCTGAAAGAACGGAGTCTGAAAGATCAGATGGCCAAA
FD963477       --> GATATGTTGGACACCTGAAAGAACGGAGTCTGAAAGATCAGATGGCCAAA
EX771531       --> GATATGTTGGACACCTGAAAGAACGGAGTCTGAAAGATCAGATGGCCAAA
EV529103       --> GATATGTTGGACACCTGAAAGAACGTAGTCTGAAAGATCAAATGGCCAAA

               401    -    451
UN39758        --> GACCCCACTGAGGTCATCCGCAAGGCTGTCTGGCGCATGCTTCCTAGTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959779       <-- GACCCCACTGAGGTCATCCGCAAGGCTGTCTGGCGCATGCTTCCTAGTAA
FD544381       <-- GACCCCACTGAGGTCATCCGCAAGGCTGTCTGGCGCATGCTTCCTAGTAA
EV544103       <-- GACCCCACTGAGGTCATCCGCAAGGCTGTCTGGCGCATGCTTCCTAGTAA
EY948248       --> GACCCCACTGAGGTCATCCGCAAGGCTGTCTGGCGCATGCTTCCTAGTAA
EX905503       --> GACCCCACTGAGGTCATCCGCAAGGCTGTCTGGCGCATGCTTCCTAGTAA
FD540493       --> GACCCCACTGAGGTCATCCGCAAGGCTGTCTGGCGCATGCTTCCTAGTAA
FD548158       --> GACCCCACTGAGGTCATCCGCAAGGCTGTCTGGCGCATGCTTCCTAGTAA
FD963477       --> GACCCCACTGAGGTCATCCGCAAGGCTGTCTGGCGCATGCTTCCTAGTAA
EX771531       --> GACCCCACTGAGGTCATCCGCAAGGCTGTCTGGCGCATGCTTCCTAGTAA
EV529103       --> GACCCCACTGAGGTCATCCGCAAGGCTGTCTGGCGCATGCTTCCTAGTAA

               451    -    501
UN39758        --> CAATTTGCGTGATGACAGAGATCGGAAGTTGAGGATATTTGAAGGCAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959779       <-- CAATTTGCGTGATGACAGAGATCGGAAGTTGAGGATATTTGAAGGCAATG
FD544381       <-- CAATTTGCGTGATGACAGAGATCGGAAGTTGAGGATATTTGAAGGCAATG
EV544103       <-- CAATTTGCGTGATGACAGAGATCGGAAGTTGAGGATATTTGAAGGCAATG
EY948248       --> CAATTTGCGTGATGACAGAGATCGGAAGCTGAGGATATTTGAAGGCAATG
EX905503       --> CAATTTGCGTGATGACAGAGATCGGAAGCTGAGGATATTTGAAGGCAATG
FD540493       --> CAATTTGCGTGATGACAGAGATCGGAAGCTGAGGATATTTGAAGGCAATG
FD548158       --> CAATTTGCGTGATGACAGAGATCGGAAGTTGAGGATATTTGAAGGCAATG
FD963477       --> CAATTTGCGTGATGACAGAGATCGGAAGTTGAGGATATTTGAAGGCAATG
EX771531       --> CAATTTGCGTGATGGCAGAGATCGGAAGTTGAGGATATTTGAAGGCAATG
EV529103       --> CAATTTGCGTGATGACAGAGATCGGAAGCTGAGGATATTTGAAGGCAATG

               501    -    551
UN39758        --> AACATCCTTTTGGGGACAAGCCACTCGAGCCATTCGTGATGCCGCCTCGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959779       <-- AACATCCTTTTGGGGACAAGCCACTCGAGCCATTCGTGATGCCGCCTCGT
FD544381       <-- AACATCCTTTTGGGGACAAGCCACTCGAACCATTCGTGATGCCGCCTCGT
EV544103       <-- AACATCCTTTTGGGGACAAGCCACTCGAGCCATTCGTGATGCCGCCTCGT
EY948248       --> AACATCCTTTTGGGGACAAGCCACTCGAGCCATTCGTGATGCCGCCTCGT
EX905503       --> AACATCCTTTTGGGGACAAGCCACTCGAGCCATTCGTGATGCCGCCTCGT
FD540493       --> AACATCCTTTTGGGGACAAGCCACTCGAGCCATTCGTGATGCCGCCTCGT
FD548158       --> AACATCCTTTTGGGGACAAGCCACTCGAACCATTCGTGATGCCGCCTCGT
FD963477       --> AACATCCTTTTGGGGACAAGCCACTCGAGCCATTCGTGATGCCGCCTCGT
EX771531       --> AACATCCTTTTGGGGACAAGCCACTCGAGCCATTCGTGATGCCGCCTCGT
EV529103       --> AACATCCTTTTGGGGACAAGCCACTCGAGCCATTCGTGATGCCGCCTCGT

               551    -    601
UN39758        --> ACAGTGAGAGAGATGCGACCCCGCGCTAGGCGAGCAATGATCCGTGCCCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959779       <-- ACAGTGAGAGAGATGCGACCCCGCGCTAGGCGAGCAATGATCCGTGCCCA
FD544381       <-- ACAGTGAGAGAGATGCGACCCCGCGCTAGGCGAGCAATGATCCGTGCCCA
EV544103       <-- ACAGTGAGAGAGATGCGACCCCGCGCTAGGCGAGCAATGATCCGTGCCCA
EY948248       --> ACAGTGAGAGAGATGCGACCCCGCGCCAGGCGAGCAATGATCCGTGCCCA
EX905503       --> ACAGTGAGAGAGATGCGACCCCGCGCCAGGCGAGTAATGATCCGTGCCCA
FD540493       --> ACAGTGAG..........................................
FD548158       --> ACAGTGAGAGAGATGCGACCCCGCGCTAGGCGAGCAATGATCCGTGCCCA
FD963477       --> ACAGTGAGAGAGATGCGACCCCGCGCTAGGCGAGCAATGATCCGTGCCCA
EX771531       --> ACAGTGAGAGAGATGCGACCCCGCACTAGGCGAGCAATGATCCGTGCCCA
EV529103       --> ACAGTGAGAGAGATGCGACCCCGCGCTAGGCGAGCAATGATCCGTGCCCA

               601    -    651
UN39758        --> GAAGAAGGCTGAGCAGGCAGAAAATGGTGGAGGAGAGGTTAAGAAAGGCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959779       <-- GAAGAAGGCTGAGCAGGCAGAAAATGGTGGAGCAGAGGTTAAGAAAGGCA  Raphanus raphanistrum subsp. maritimus
FD544381       <-- GAAGAAGGCTGAGCAGGCAGAAAATGGTGGAGGAGAGGTTAAGAAAGGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544103       <-- GAAGAAGGCTGAGCAGGCAGAAAATGGTGGAGGAGAGGTTAAGAAAGGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY948248       --> GAAGAAGGCTGA......................................  Raphanus sativus cv Rat-Tail Radish #3870
EX905503       --> GAAGAAGGCTGAGCAGGCAGAAAATGGTGGAGCAGAGGTTAAaa......  Raphanus sativus cv Rat-Tail Radish #3870
FD540493       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (MS)
FD548158       --> GAAGAAGGCTGAGCAGGCAGAAAATGGTGGAGGAGAGGTTAAGAAAGGCA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD963477       --> GAAGAAGGCTGAGCAGGCAGAAAATGGTGGAGCAGAGGTTAAGAAAGGCA  Raphanus raphanistrum subsp. maritimus
EX771531       --> GAAGAAGGCTGA......................................  Raphanus raphanistrum subsp. landra
EV529103       --> G.................................................  Raphanus raphanistrum subsp. maritimus

               651    -    701
UN39758        --> AGAAGAGGACTCCTCCTTCTCAAAGTGCAACTGCGTAGAAGAAAAGCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959779       <-- AGAAGAGGACTCCTCCTTCTCAAAGTGCAACTGCGTAGAAGAAAAGCTTC
FD544381       <-- AGAAGAGGACTCCTCCTTCTCAAAGTGCAACTGCGTAGAAGAAAAGCTTC
EV544103       <-- AGAAGAGGACTCCTCCTTCTCAAAGTGCAACTGCGTAGAAGAAAAGCTTC
EY948248       --> ..................................................
EX905503       --> ..................................................
FD540493       --> ..................................................
FD548158       --> AGAAGAGGACTCCTCCTTCTCAAAGTGCAACTGCGTAGAAGAAAAGCTTC
FD963477       --> AGAAGAGGACTCCTCCTTCTCAAAGTGCAACTGCGTAGAAGAAA-GCTTC
EX771531       --> ..................................................
EV529103       --> ..................................................

               701    -    751
UN39758        --> ACAGATGTGACTCAGTCTTATTAAGCAACGATCATAATGCAGTCGTGGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959779       <-- ACAGATGTGACTCAGTCTTATTAAGCAACGATCATAATGCAGTCGTGGTG
FD544381       <-- ACAGATGTGACTCAGTCTTATTAAGCAACGATCATAATGCAGTCGTGGTG
EV544103       <-- ACAGATGTGACTCAGTCTTATTAAGCAACGATCATAATGCAGTCGTGGTG
EY948248       --> ..................................................
EX905503       --> ..................................................
FD540493       --> ..................................................
FD548158       --> ACAGATGTGACTCAGTCTTATTAAGCAACGATCATAATGCAGTCGTGGTG
FD963477       --> ACAGATGTGACTCAGTCTTAT-AAGCA-CGATCATAATGCAGTCGTGGTG
EX771531       --> ..................................................
EV529103       --> ..................................................

               751    -    801
UN39758        --> TAAGTTCTTTTTGGTTGTTGAGTGCCAGACAATAGACACGACGGCCCTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959779       <-- TAAGTTTTTTTTGGTTGTTGAGTGCCAGACAATAGACACGACGGCCCTAT
FD544381       <-- TAAGTTCTTTTTGGTTGTTGAGTGCCAGACAATAGACACGACGGCCCTAT
EV544103       <-- TAAGTTCTTTTTGGTTGTTGAGTGCCAGACAATAGACACGACGGCCCTAT
EY948248       --> ..................................................
EX905503       --> ..................................................
FD540493       --> ..................................................
FD548158       --> TAAGTTCTT.........................................
FD963477       --> TAAGTT-TTTTTGGTTGTTGAGTGC-AGACA-TAGACAC...........
EX771531       --> ..................................................
EV529103       --> ..................................................

               801    -    851
UN39758        --> CATAAAGCAAAGCAAAACCCTTAAACATGGTCTCGTTTCTGGTTTAACTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959779       <-- CATAAAGCAAAGCAAAACCCTTAAACATGGTCTCCTTTCTGGTTTAACTG
FD544381       <-- CATAAAGCAAAGCAAAACCCTT............................
EV544103       <-- CATAAAGCAAAGCAAAACCCTTAAACATGGTCTCGTTTCTGGTTTAACTG
EY948248       --> ..................................................
EX905503       --> ..................................................
FD540493       --> ..................................................
FD548158       --> ..................................................
FD963477       --> ..................................................
EX771531       --> ..................................................
EV529103       --> ..................................................

               851    -    901
UN39758        --> TTAAGCTTTGTGTTCTTCTGCTGCCAGCCTAGATAAGTGAATACTTTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959779       <-- TTAAGCTTTGTGTTCTTCTGCTGCCAGCCTAGATAAGTGAATACTTTTTG
FD544381       <-- ..................................................
EV544103       <-- TTAAGCTCTGTGTTCTTCTGCTGCCAGCCTAGATAAGTGAATACTTTTTG
EY948248       --> ..................................................
EX905503       --> ..................................................
FD540493       --> ..................................................
FD548158       --> ..................................................
FD963477       --> ..................................................
EX771531       --> ..................................................
EV529103       --> ..................................................

               901    -    951
UN39758        --> AGGAATGTTAGTAGAATTAAGCATTTATGCCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD959779       <-- AGG.............................
FD544381       <-- ................................
EV544103       <-- AGGAATGTTAGTAGAATTAAGCATTTATGCCC
EY948248       --> ................................
EX905503       --> ................................
FD540493       --> ................................
FD548158       --> ................................
FD963477       --> ................................
EX771531       --> ................................
EV529103       --> ................................