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Alignment for radish unigene UN45947

               1      -     51
UN45947        --> GGAAATCCGGTCCGACAATGGCGATTTCCGTAACTCATTGTTTCTCCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565493       <-- ..................................................
FD982867       <-- ..................................................
EY895776       <-- ..................................................
EX750751       <-- ..................................................
EY927063       <-- ..................................................
FD575881       <-- ..................................................
FD545180       <-- ..................................................
EV527500       --> GGAAATCCGGTCCGACAATGGCGATTTCCGTAACTCATTGTTTCTCCTTC
EY900172       --> GGAAATCCGGTCCGACAATGGCGATTTCCGTAACTCATTGTTTCTCCTTC
FD986649       --> GGAAATCCGGTCCGACAATGGCGATTTCCGTAACTCATTGTTTCTCCTTC
FD988745       --> .....ggCGGTCCGACAATGGCGATTTCCGTAACTCATTGTTTCTCCTTC
EX747020       --> ......ggGGTCCGACAATGGCGATTTCCGTAACTCATTGTTTCTCCTTC
FD549088       --> ..................................................

               51     -    101
UN45947        --> TCCTCTTCATCGCTCTATCTGTCTCCATCTACATCAAGAAAATCGAGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565493       <-- ..................................................
FD982867       <-- ..................................................
EY895776       <-- ..................................................
EX750751       <-- ..................................................
EY927063       <-- ..................................................
FD575881       <-- ..................................................
FD545180       <-- ..................................................
EV527500       --> TCCTCTTCATCGCTCTATCTGTCTCCATCTACATCAAGAAAATCGAGAAT
EY900172       --> TCCTCTTCATCGCTCTATCTGTCTCCATCTACATCAAGAAAATCGAGAAT
FD986649       --> TCCTCTTCATCGCTCTATCTGTCTCCACCTACATCAAGAAAATCGAGAAT
FD988745       --> CCCTCTTCATCGCTCTATCTGTCTCCATCTACATCAAGAAAATCGAGAAT
EX747020       --> TCCTCTTCATCGCTCTATCTGTCTCCATCTACATCAAGAAAATCGAGAAT
FD549088       --> ........ggCGCTCTATCTGTCTCCATCTACATCAAGAAAATCGAGAAT

               101    -    151
UN45947        --> CATACCCATCTATTTCCATGGAAGACCACCTTCATCTCCATTATTTTCGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565493       <-- ..................................................
FD982867       <-- ..................................................
EY895776       <-- ..................................................
EX750751       <-- ..................................................
EY927063       <-- ..................................................
FD575881       <-- ..................................................
FD545180       <-- ..................................................
EV527500       --> CATACCCATCTATTTCCATGGAAGACCACCTTCATCTCCATTATTTTCGA
EY900172       --> CACACCCATCTATTTCCATGGAAGACCACCTTCATCTCCATTATTTTCGA
FD986649       --> CATACCCATCTATTTCCATGGAAGACCACCTTCATCTCCATTATTTTCGA
FD988745       --> CATACCCATCTATT-CCATGGAAGACCACCTTCATCTCCATTATTTTCGA
EX747020       --> CATACCCATCTATTTCCATGGAAGACCACCTTCATCTCCATTATTTTCGA
FD549088       --> CATACCCATCTATTTCCATGGAAGACCACCTTCATCTCCATTATTTTCGA

               151    -    201
UN45947        --> AACTAAACCGAGGGGTTCAATTCATGTATCTATCTCGGAAAAATGTCGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565493       <-- AACTAAACCGTGGGGTTCAATTCATGTATCTATCTCGGAAAAATGACGTA
FD982867       <-- ..................................................
EY895776       <-- ..................................................
EX750751       <-- ..................................................
EY927063       <-- ..................................................
FD575881       <-- ..................................................
FD545180       <-- ..................................................
EV527500       --> AACTAAACCGAGGGGTTCAATTCATGTATCTATCTCGGAAAAATGTCGTA
EY900172       --> AACTAAACCGAGGGGTTCAATTCATGTATCTATCTCGGAAAAATGTCGTA
FD986649       --> AACTAAACCGAGGGTTTCAATTCATGTATCTATCTCGGAAAAATGTCGTA
FD988745       --> GACTAAACCGAGGGGTTCAATTCATGTATCTATCTCGGAAAAATGTCGTA
EX747020       --> AACTAAACCGAGGGGTTCAATTCATGTATCTATCTCGGAAAAATGTCGTA
FD549088       --> AACTAAACCGAGGGGTTCAATTCATGTATCTATCTCGGAAAAATGTCGTA

               201    -    251
UN45947        --> TCATGTCACTCTGCCCACCAAGCTTCACCAACTAATGGTGAAGAAACGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565493       <-- TCATGTCTCTCTGCCCACCAAGCTTCACCAACTAATCGTGAAGAAACGAA
FD982867       <-- ..................................................
EY895776       <-- ..................................................
EX750751       <-- ..................................................
EY927063       <-- ..................................................
FD575881       <-- ..................................................
FD545180       <-- ..................................................
EV527500       --> TCATGTCACTCTGCCCACCAAGCTTCACCAACTAATGGTGAAGAAACGAA
EY900172       --> TCATGTCACTCTGCCCACCAAGCTTCACCAACTAATGGTGAAGAAACGAA
FD986649       --> TCATGTCACTCTGCCCACCAAGCTTCACCAACTAATGGTGAAGAAACGAA
FD988745       --> TCATGTCACTCTGCCCACCAAGCTTCACCAACTAATGGTGAAGAAACGAA
EX747020       --> TCATGTCACTCTGCCCACCAAGCTTCACCAACTAATGGTGAAGAAACGAA
FD549088       --> TCATGTCACTCTGCCCACCAAGCTTCACCAACAAATGGTGAAGAAACGAA

               251    -    301
UN45947        --> TTCAAAGCACCCACCAGATGTAAAAACCCTGATTAAAGCTTATAAACAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565493       <-- TTCAAAGCACCCACCAGATGTAAAAACCCTGATTAAAGCTTATAAACAAG
FD982867       <-- .....................AAAAACCCTGATTAAAGCTTATAAACAAG
EY895776       <-- ..................................................
EX750751       <-- ..................................................
EY927063       <-- ..................................................
FD575881       <-- ..................................................
FD545180       <-- ..................................................
EV527500       --> TTCAAAGCACCCACCAGATGTAAAAACCCTGATTAAAGCTTATAAACAAG
EY900172       --> TTCAAAGCACCCATCAGATGTAAAAACCCTGATTAAAGCTTATAAACAAG
FD986649       --> TTCAAAGCACCCGCCAGATGTAAAAACCCTGATTAAAGCTTATAAACAAG
FD988745       --> TTCAAAGCACCCGCCAGATGTAAAAACCCTGATTAAAGCTTATAAACAAG
EX747020       --> TTCAAAGCACCCACCAGATGTAAAAACCCTGATTAAAGCTTATAAACAAG
FD549088       --> TTCAAAGCACCCACCAGATGTAAAAACCCTGATTAAAGCTTATAAACAAG

               301    -    351
UN45947        --> CTCTCTTCAATGGACACGAACTCACCGTTACAGAGATCGAAACGGTTTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565493       <-- CTCTCTTCAATGGAGACGAACTCACCGTTACAGAGATCGAAACGGTTTTT
FD982867       <-- CTCTCTTCAATGGACACGAACTCACCGTTACAGAGATCGAAACGGTTTTT
EY895776       <-- .............................................TTTTT
EX750751       <-- ..................................................
EY927063       <-- ..................................................
FD575881       <-- ..................................................
FD545180       <-- ..................................................
EV527500       --> CTCTCTTCAATGGACACGAACTCACCGTTACAGAGATCGAAACGGTTTTT
EY900172       --> CTCTCTTCAATGGACACGAACTCACCTTTACAGAGATCGAAACGGTTTTT
FD986649       --> CTCTCTTCAATGGACACGAACTCACCGTTACAGAGATCGAAACGGTTTTT
FD988745       --> CTCTCTTCAATGGACACGAACTCACCGTTACAGAGATCGAAACGGTTTTT
EX747020       --> CTCTCTTCAATGGACACGAACTCACCGTTACAGAGATCGAAACGGT....
FD549088       --> CTCTCTTCAATGGACACGAACTCACCGTTACAGAGATCGAAACGGTTTTT

               351    -    401
UN45947        --> TGTGAAATCGAGAAGGAAAAGAATAGATTCGACCACAAGGTTTTATCATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565493       <-- TGTGAAATCGAGAAGGAAAAGAATAGATTCGACCACAAGGTTTTATCATT
FD982867       <-- TGTGAAATCGAGAAGGAAAAGAATAGATTCGACCACAAGGTTTTATCATT
EY895776       <-- TGTGAAATCGAGAAGGAAAAGAATAGATTCGACCACAAGGTTTTATCATT
EX750751       <-- .............................gGACCACAAGGTTTTATCATT
EY927063       <-- ...................................CAAGGTTTTATCATT
FD575881       <-- ..................................................
FD545180       <-- ..................................................
EV527500       --> TGTGAAATCGAGAAGGAAAAGAATAGATTCGACCACAAGGTTTTATCATT
EY900172       --> TGTGAAATCGAGAAGGAAAAGAATAGATTCGACCACAAGGTTTTATCATT
FD986649       --> TGTGAAATCGAGAAGGAAAAGAATAGATTCGACCACAAGGTTTTATCATT
FD988745       --> TGTGAAATTGAGAAGGAAAAGAATAGATTCGACCACAAGGTTTTATCATT
EX747020       --> ..................................................
FD549088       --> TGTGA.............................................

               401    -    451
UN45947        --> ATCAATGAAGATAGCTTCAGAGAAGGACACGAAAATCAGGTTGCAGGCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565493       <-- ATCAATGAAGGTAGCTTCAGAGAAGGACACGAAAATCAGGTTGCAGGCTG
FD982867       <-- ATCAATGAAGATAGCTTCAGAGAAGGACACGAAAATCAGGTTGCAGGCTG
EY895776       <-- ATCAATGAAGATAGCTTCAGAGAAGGACACGAAAATCAGGTTGCAGGCTG
EX750751       <-- ATCAATGAAGATAGCTTCAGAGAAGGACACGAAAATCAGGTTGCAGGCTG
EY927063       <-- ATCAATGAAGATAGCTTCAGAGAAGGACACGAAAATCAGGTTGCAGGCTG
FD575881       <-- ................TCAGAGAAGGACACGAAAATCAGGTTGCAGGCTG
FD545180       <-- ..................................................
EV527500       --> ATCAATGAAGATAGCTTCAGAGAAGGACACGAAAATCAGGTTGCAGGCTG
EY900172       --> ATCAATGAAGATAGCTTCAGAGAAGGACACGAAAATCAGGTTGCAGGCTG
FD986649       --> ATCAATGAAGATAGCTTCAGAGAAGGACACGAAAATCAGGTTGCAGGCTG
FD988745       --> ATCAATGAAGATAGCTTCAGAGAAGGACACGAAAATCAGGTTGCAGGCTG
EX747020       --> ..................................................
FD549088       --> ..................................................

               451    -    501
UN45947        --> ATTTTGACAATACAAGGAAAAAGCTTGACAAGGATCGGCTTAGCACAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565493       <-- ATTTTGACAATACAAGGAAAAAGCTTGACAAGGATCGGCTTAGCACAGAG
FD982867       <-- ATTTTGACAATACAAGGAAAAAGCTTGACAAGGATCGGCTTAGCACAGAG
EY895776       <-- ATTTTGACAATACAAGGAAAAAGCTTGACAAGGATCGGCTTAGCACAGAG
EX750751       <-- ATTTTGACAATACAAGGAAAAAGCTTGACAAGGATCGGCTTAGCACAGAG
EY927063       <-- ATTTTGACAATACAAGGAAAAAGCTTGACAAGGATCGGCTTAGCACAGAG
FD575881       <-- ATTTTGACAATACAAGGAAAAAGCTTGACAAGGATCGGCTTAGCACAGAG
FD545180       <-- ..................................................
EV527500       --> ATTTTGACAATACAAGGAAAAAGCTTGACAAGGATCGGCTTAGCACAGAG
EY900172       --> ATTTTGACAATACAAGGAAAAAGCTTGACAAGGATCGGCTTAGCACAGAG
FD986649       --> ATTTTGACAATACAAGGAAAAAGCTTGACAAGGATCGGCTTAGCACAGAG
FD988745       --> ATTTTGACAATACAAGGAAAAAGCTTGACAAGGATCGGCTTAGCACAGAG
EX747020       --> ..................................................
FD549088       --> ..................................................

               501    -    551
UN45947        --> TCAAACGCAAAAGTGCAAATCATGAAGAGTCTCTTGCCACTCGTTGATAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565493       <-- TCAAACGCAAAAGTGCAAATCATGAAGAGTCTCTTGCCACTCGTTGATAG
FD982867       <-- TCAAACGCAAAAGTGCAAATCATGAAGAGTCTCTTGCCACTCGTTGATAG
EY895776       <-- TCAAACGCAAAAGTGCAAATCATGAAGAGTCTCTTGCCACTCGTTGATAG
EX750751       <-- TCAAACGCAAAAGTGCAAATCATGAAGAGTCTCTTGCCACTCGTTGATAG
EY927063       <-- TCAAACGCAAAAGTGCAAATCATGAAGAGTCTCTTGCCACTCGTCGATAG
FD575881       <-- TCAAACGCAAAAGTGCAAATCATGAAGAGTCTCTTGCCACTCGTTGATAG
FD545180       <-- ...............CAAATCATGAAGAGTCTCTTGCCACTCGTTGATAG
EV527500       --> TCAAACGCAAAAGTGCAAATCATGAAGAGTCTCTTGCCACTCGTTGATAG
EY900172       --> TCAAACGCAAAAGTGCAAATCATGAAGAGTCTCTTGCCACTCGTTGATAG
FD986649       --> TCAAACGCAAAAGTGCAAATCATGAAGAGTCTCTTGCCACTCGTTGATAG
FD988745       --> TCAAACGCAAAAGTGCAATTCATGAAGAGTCTCTTGCCACTCGTTGATAG
EX747020       --> ..................................................
FD549088       --> ..................................................

               551    -    601
UN45947        --> TTTTGAGAGCGCTAGGCAACAGACTAAACCCAATACAGAAATGGAGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565493       <-- TTTTGAGAGCGCTAGGCAACAGACTAAACCCAATACAGAAATGGAGAAGA
FD982867       <-- TTTTGAGAGCGCTAGGCAGCAGACTAAACCCAATACAGAAATGGAGAAGA
EY895776       <-- TTTTGAGAGCGCTAGGCAACAGACTAAACCCAATACAGAAATGGAGAAGA
EX750751       <-- TTTTGAGAGCGCTAGGCAACAGACTAAACCCAATACAGAAATGGAGAAGA
EY927063       <-- TTTTGAGAGCGCTAGGCAACAGACTAAACCCAATACAGAAATGGAGAAGA
FD575881       <-- TTTTGAGAGCGCTAGGCAAC-GACTAAACCCAATACAGAAATGGAGAAGA
FD545180       <-- TTTTGAGAGCGCTAGGCAACAGACTAAACCCAATACAGAAATGGATAAGA
EV527500       --> TTTTGAGAGCGCTAGGCAACAGACTAAACCCAATACAGAAATGGAGAAGA
EY900172       --> TTTTGAGAGCGCTAGGCAACAGACTAAACCCAATACAGAAATGGAGAAGA
FD986649       --> TTTTGAGAGCGCTAGGCAGCAGACTAAACCCAATACAGAAATGGAGAAGA
FD988745       --> TTTTGAGAGCGCTAGGCAACAGACTAAACCCAATACAGAAATGGAGAAGA
EX747020       --> ..................................................
FD549088       --> ..................................................

               601    -    651
UN45947        --> AGATCGATACGAGTTATCAGGG-AATTTACAGGCAATTCGTTGAAGTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565493       <-- AGATCGATACGAGTTATCAGGG-AATTTACAGGCAATTCGTTGAAGTGTT
FD982867       <-- AGATCGGTACGAGTTATCAGGG-AATTTACAGGCAATTCGTTGAAGTGTT
EY895776       <-- AGATCGATACGAGTTATCAGGG-AATTTACAGGCAATTCGTTTAAGTGTT
EX750751       <-- AGATCGATACGAGTTATCAGGG-AATTTACAGGCAATTCGTTGAAGTGTT
EY927063       <-- AGATCGATACGAGTTATCAGGG-AATTTACAGGCAATTCGTTGAAGTGTT
FD575881       <-- AGATCGATACGAGTTATCAGGG-AATTTACAGGCAATTCGTTGAAGTGTT
FD545180       <-- AGATCGATACGAGTTATCAGGG-AATTTACAGGCAATTCGTTGAAGTGTT
EV527500       --> AGATCGATACGAGTTATCAGGGGAATTTACAGGCAATTCGTTGAAGTGTT
EY900172       --> AGATCGATACGAGTTATCAGGG-AATTTACAGGCAATTCGTTTAAGTGTT
FD986649       --> AGATCGGTACGAGTTATCAGGG-AATTTACAGGCAATTCGTTGAAGTGTT
FD988745       --> AGATCGATACGAGTTATCAGGG-AATTTACAGGCAATTCGTTGAAGTGTT
EX747020       --> ..................................................
FD549088       --> ..................................................

               651    -    701
UN45947        --> GAGACACCTTCGTGTTAAAGCCATTCCAACTCTGGGCAAGCCTTTTGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565493       <-- GAGACACCTTCGTGTTAAAGCCATTCCAACTCTGGGCAAGCCTTTTGATC
FD982867       <-- GAGACACCTTCGTGTTAAAGCCATTCCAACTCTGGGCAAGCCTTTTGATC
EY895776       <-- GAGACACCTTCGTGTTAAAGCCATTCCAACTCTGGGCAAGCCTTTTGATC
EX750751       <-- GAGACACCTTCGTGTTAAAGCCATTCCAACTCTGGGCAAGCCTTTTGATC
EY927063       <-- GAGACACCTTCGTGTTAAAGCCATTCCAACTCTGGGCAAGCCTTTTGATC
FD575881       <-- GAGACACCTTCGTGTTAAAGCCATTCCAACTCTGGGCAAGCCTTTTGATC
FD545180       <-- GAGACACCTTCGTGTTAAAGCCATTCCAACTCTGGGCAAGCCTTTTGATC
EV527500       --> GAGACACCTTCGTGTTAAAGCCATTCCAACTCTGGGCAAGCCTTTTGATC
EY900172       --> GAGACACCTTCGTGTTAAAGCCATTCCAACTCTGGGCAAGCCTTTTGATC
FD986649       --> GAGACACCTTCGTGTTAAAGCCATTCCAACTCTGGGCAAGCCTTTTGATC
FD988745       --> GAGACACCTTCGTGTTAAAGCCATTCCAACTCTGGGCAAGCCTTTTGATC
EX747020       --> ..................................................
FD549088       --> ..................................................

               701    -    751
UN45947        --> CTTTGTTGCACGAGGCTATTTCGCGAGAAGAATCTGAGGCGGTTAAGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565493       <-- CTTTGTTGCACGAGGCTACTTCGCGAGAAGAATCCGAGGCGGTTAAGGTA
FD982867       <-- CTTTGTTGCACGAGGCTATTTCGCGAGAAGAATCTGAGGCGGTTAAGGTA
EY895776       <-- CTTTGTTGCACGAGGCTATTTCGCGAGAAGAATCTGAGTCGGTTAAGGTA
EX750751       <-- CTTTGTTGCACGAGGCTATTTCGCGAGAAGAATCTGAGGCGGTTAAGGTA
EY927063       <-- CTTTGTTGCACGAGGCTACTTCGCGAGAAGAATCCGGGGCGGTTAAGGTA
FD575881       <-- CTTTGTTGCACGAGGCTACTTCGCGGGAAGAATCCGAGGCGGTTAAGGTA
FD545180       <-- CTTTGTTGCACGAGGCTATTTCGCGAGAAGAATCTGAGGCGGTTAAGGTA
EV527500       --> CTTTGTTGCACGAGGCTGTTTCGCGAGAAGAATCTGAGGCGGT.......
EY900172       --> CTTTGTTGCACGAG-CTATTTCGCGAGAAGAATCTGAGTCGGTaa.....
FD986649       --> CTTTGTTGCACGAG-CTATTTCGCGAGAAGAATC................
FD988745       --> CTTTGTTtca........................................
EX747020       --> ..................................................
FD549088       --> ..................................................

               751    -    801
UN45947        --> GGGATGATAACCGAGGAGCTTACCCGGGGTTTTCTTCTAGGAGATCGGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565493       <-- GGGATAATAACCGAGGATCTTACCCGGGGTTTTCTTCTAGGAGATCGGGT  Raphanus sativus var. oleiformis
FD982867       <-- GGGATGATAACCGAGGAGCTTACCCGGGGTTTTCTTCTAGGAGATCGGGT  Raphanus raphanistrum subsp. landra
EY895776       <-- GGGATGATAACCGAGGAGCTTACCCGGGGTTTTCTTCTAGGAGATCGGGT  Raphanus raphanistrum subsp. maritimus
EX750751       <-- GGAATGATAACCGAGGAGCTTACCCGGGGTTTTCTTCTAGGAGATCGGGT  Raphanus raphanistrum subsp. maritimus
EY927063       <-- GGGATAATAACCGAGGAGCTTACCCGGGGTTTTCTTCTAGGAGATCGGGT  Raphanus sativus var. oleiformis
FD575881       <-- GGGATAATAACCGAGGAGCTTACCCGGGGTTTTTTTCTAGGAGATCGGGT  Raphanus sativus cv Early Scarlet Globe
FD545180       <-- GGGATGATAACCGAGGAGCTTACCCGGGGTTTTCTTCTAGGAGATCGGGT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV527500       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY900172       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD986649       --> ..................................................  Raphanus raphanistrum subsp. landra
FD988745       --> ..................................................  Raphanus raphanistrum subsp. landra
EX747020       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD549088       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               801    -    851
UN45947        --> TCTGCGACCAGCAAAGGTTAAAGTCTCTCTAGGACCCATCAAGAAGAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565493       <-- TTTGAGACCAGCAAAGGTTAAAGTCTCTCTAGGACCCATCAAGAAGAAGA  Raphanus sativus var. oleiformis
FD982867       <-- TCTGCGACCAGCAAAGGTTAAAGTCTCTCTAGGACCCATCAAGAAGAAGA  Raphanus raphanistrum subsp. landra
EY895776       <-- TCTGCGACCAGCAAAGGTTAAAGTCTCTCTAGGACCCATCAAGAAGAAGA  Raphanus raphanistrum subsp. maritimus
EX750751       <-- TCTGCGACCAGCAAAGGTTAAAGTCTCTCTAGGACCCATCAAGAAGAAGA  Raphanus raphanistrum subsp. maritimus
EY927063       <-- TCTGAGACCAGCAAAGGTTAAAGTCTCTCTAGGACCCATCAAGAAGAAGA  Raphanus sativus var. oleiformis
FD575881       <-- TTTGAGACCAGCAAAGGTTAAAGTCTCTCTAGGACCCATCAAGAAGAAGA  Raphanus sativus cv Early Scarlet Globe
FD545180       <-- TTTGCGACCAGCAAAGGTTAAAGTCTCTTTAGGACCCATCAAGAAGAAGA  Raphanus raphanistrum subsp. raphanistrum (NY)
EV527500       --> ..................................................  Raphanus raphanistrum subsp. maritimus
EY900172       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD986649       --> ..................................................  Raphanus raphanistrum subsp. landra
FD988745       --> ..................................................  Raphanus raphanistrum subsp. landra
EX747020       --> ..................................................  Raphanus raphanistrum subsp. maritimus
FD549088       --> ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)

               851    -    901
UN45947        --> CTGCTTCACCTTCTGCTTGAGTTGATGTTTGGTAAATGGTTCTATGTGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565493       <-- CTGCTTCACCTTTTGCTTGAGTTGATGTTTGGTAAATGGTTCTATGTGTC
FD982867       <-- CTGCTTCACCTTCTGCTTGAGTTGATGTTTGGTAAATGGTTCTATGTGTC
EY895776       <-- CTGCTTCACCTTCTGCTTGAGTTGATGTTTGGTAAATGGTTCTATGTGTC
EX750751       <-- CTGCTTCACCTTCTGCTTGAGTTGATGTTTGGTAAATGGTTCTATGTGTC
EY927063       <-- CTGCTTCACCTTCTGCTTGAGTTGATGTTTGGTAAATGGTTCTATGTGTC
FD575881       <-- CTGCTTCACCTTCTGCTTGAGTTGATGTTTGGTAAATGGTTCTATGTGTC
FD545180       <-- CTGCTTCACCTTCTGCTTGAGTTGATGTTTGGTAAATGGTTCTATGTGTC
EV527500       --> ..................................................
EY900172       --> ..................................................
FD986649       --> ..................................................
FD988745       --> ..................................................
EX747020       --> ..................................................
FD549088       --> ..................................................

               901    -    951
UN45947        --> TTTGTGTTTAACTCAACTTCTTTCTTTTTCAATGGTAAACACACAAACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565493       <-- TTTGTGTTTAACTCAACTTCTTTCTTTTTCAACGGTAAACACACAAACAT
FD982867       <-- TTTGTGTTTAACTCAACTTCTTTCTTTTTCAATGGTAAACACACAAACAT
EY895776       <-- TTTGTGTTTAACTCAACTTCTTTCTTTTTCAATGGTAAACACACAAACAT
EX750751       <-- TTTGTGTTTAACTCAACTTCTTTCTTTTTCAATGGTAAACACACAAACAT
EY927063       <-- TTTGTGTTTAACTCAACTTCTTTCTTTTTCAATGGTAAACACACAAACAT
FD575881       <-- TTTGTGTTTAACTCAACTTCTTTCTTTTTCAATGGTAAACACACAAACGT
FD545180       <-- TTTGTGTTTAACTCAACTTCTTTCTTTTTCAATGGTAAACACACAAACAT
EV527500       --> ..................................................
EY900172       --> ..................................................
FD986649       --> ..................................................
FD988745       --> ..................................................
EX747020       --> ..................................................
FD549088       --> ..................................................

               951    -   1001
UN45947        --> AGCTATATCTGATTAGGAATTTCGTTTGCTGCTGAGAGTTGGTTTTACTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565493       <-- AGCTATATCTGATTAGG.................................
FD982867       <-- AGC...............................................
EY895776       <-- AGCTATATCTGATTAGGAATTTCGTTTGCTGCTGAGAGTTGGTTTTACTC
EX750751       <-- AGCTATATCTGATTAGGAATTTCGTTTGCTGCTGAGAGTTGGTTTTACTC
EY927063       <-- AGCTATATCTGATTAGGAATTTCGTTTGCTGCTGAGAGTTGGTTTTACTC
FD575881       <-- AGCTATATCTGATTAGGAATTTCGTTTGCTGCTGAGAGTTGGTTTTACTC
FD545180       <-- AGCTATATCTGATTAGGAATTTCGTTTGCTGCTGAGAGTTGGTTTTACTC
EV527500       --> ..................................................
EY900172       --> ..................................................
FD986649       --> ..................................................
FD988745       --> ..................................................
EX747020       --> ..................................................
FD549088       --> ..................................................

               1001   -   1051
UN45947        --> ATGGATTTATTTAATCAGAAGCTTCAGGTTCATGTCGCCAGTTTTGGTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565493       <-- ..................................................
FD982867       <-- ..................................................
EY895776       <-- ATGGATTTATTTAATCAGAAGCTTCAGGTTCATGTCGCC...........
EX750751       <-- ATGGATTTATTTAATCAGAAGCTTCAGGTTCATGTCGTCAGTTTTGGTTT
EY927063       <-- ATGGATTTATTTAATCAGAAGCTTCAGGTTCAg.................
FD575881       <-- ATGGATTTATTTAATCAGAAGCTTCAGGT.....................
FD545180       <-- ATGGATTTATTTAATCAGAAGCTTCAGGTTCATGTCGCC...........
EV527500       --> ..................................................
EY900172       --> ..................................................
FD986649       --> ..................................................
FD988745       --> ..................................................
EX747020       --> ..................................................
FD549088       --> ..................................................

               1051   -   1101
UN45947        --> TTAACAAATAAGTTGATACAAATATTTTTTCGACCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD565493       <-- .....................................
FD982867       <-- .....................................
EY895776       <-- .....................................
EX750751       <-- TTAACAAATAAGTTGATACAAATATTTTTTCGACCTG
EY927063       <-- .....................................
FD575881       <-- .....................................
FD545180       <-- .....................................
EV527500       --> .....................................
EY900172       --> .....................................
FD986649       --> .....................................
FD988745       --> .....................................
EX747020       --> .....................................
FD549088       --> .....................................