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Alignment for radish unigene UN50549

               1      -     51
UN50549        --> GAAGAAGTTTAATTTTATTGGATGACATTAATAATCCGCAAACCAAGGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX746377       <-- .............TTTATTGGATGACATTAATAATCCGCAAACCAAGGTA
EV552580       <-- ..................................................
FD961832       --> GAAGAAGTTTAATTTTATTGGATGACATTAATAATCCGCAAACCAAGGTA
FD576074       --> ..................................................
EV547468       --> ..................................................
EY926548       --> ..................................................
EX751639       --> ..................................................

               51     -    101
UN50549        --> CGAGGATGACTCTATTCAAGAAAAATGTTTAGAATAGAGACGAGATCAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX746377       <-- CGAGGATGACTCTATTCAAGAAAAATGTTTAGAATAGAGACGAGATCAGT
EV552580       <-- ..............................AGAATAGAGACGAGATCAGT
FD961832       --> CGAGGATGACTCTATTCAAGAAAAATGTTTAGAATAGAGATGAGATCAGT
FD576074       --> .........CTCTATTCAAGAAAAATGTTTAGAATAGAGACGAGATCAGT
EV547468       --> ..............................AGAATAGAGACGAGATCAGT
EY926548       --> ............................................ATCAGT
EX751639       --> .............................................TCAGT

               101    -    151
UN50549        --> TTAAGGGGAACACAAATGTCTCAAGCAGAAGCAACCAAGAGTCCGTTGTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX746377       <-- TTAAGGGGAACACAAATGTCTCAAGCAGAAGCAACCAAGAGTCCc.....
EV552580       <-- TTAAGGGGAACACAAATGTCTCTAGCAGAAGCAACCAAGAGTCCGTTGTG
FD961832       --> TTAAGGGGAACACAAATGTCTCAAGCAGAAGCAACCAAGAGTCCGTTGTG
FD576074       --> TTAAGGGGAACACAAATGTCTCAAGCAGAAGCAACCAAGAGTCTGTTGTG
EV547468       --> TTAAGGGGAACACAAATGTCTCTAGCAGAAGCAACCAAGAGTCCGTTGTG
EY926548       --> TTAAGGGGAACACAAATGTCTCAAGCAGAAGCAACCAAAAGTCCGTTGTG
EX751639       --> TTAAGGGGAACACAAATGTCTCAAGCAAAAGCAACCAAAAGTCCGTTGTG

               151    -    201
UN50549        --> CCTGAGAAGAGGCTCTGGGGAAGGTTCTCGTCCTCTGAACTCCACAAACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX746377       <-- ..................................................  Raphanus raphanistrum subsp. maritimus
EV552580       <-- CCTGAGAAGAGGCTCTGGGGAAGGTTATCGTCCTCTGAACTCCACAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD961832       --> CCTGAAAAGAGGCTCTGGGGAAGGTTCTCGTCCTCGGAACTCCACAAACA  Raphanus raphanistrum subsp. maritimus
FD576074       --> CCTGAGAAGAGGCTCTGGGGAAGGTTCTCGTCCTCTGAACTCCACAAACA  Raphanus sativus cv Early Scarlet Globe
EV547468       --> CCTGAGAAGAGGCTCTGGGGAAGGTTATCGTCCTCTGAACTCCACAAACA  Raphanus raphanistrum subsp. raphanistrum (NY)
EY926548       --> CCTGAAAAGAGGCTCTGGGGAAGGTTCTCGTCCTCTGAACTCCACAAACA  Raphanus sativus var. oleiformis
EX751639       --> CCTGAAAAAAGGCTCTGGGGAAGGTTCTCGTCCTCTGAACTCCACAAACA  Raphanus raphanistrum subsp. maritimus

               201    -    251
UN50549        --> CTTTTAGAGGCGCTTTTCCTCCTCCCAAAGCAAGTATGGTGTTTCTGAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX746377       <-- ..................................................
EV552580       <-- CTTTTAGAGGCGCTTTTCCTCCTCCCAAAGCAAGTATGGTGTTTCTGAAT
FD961832       --> CTTTTAGAGGCGCTTTTCCTCCTCCCAAAGCAAGTATGGTGTTTCTGAAT
FD576074       --> CTTTTAGAGGCGCTTTTCCTCCTCCCAAAGCAAGTATGGTGTTTCCGAAT
EV547468       --> CTTTTAGAGGCGCTTTTCCTCCTCCCAAAGCAAGTATGGTGTTTCTGAAT
EY926548       --> CTTTTAGAGGCGCTTTTCCTCCTCCCAAAGCAAGTATGGTGTTTCTGAAT
EX751639       --> CTTTTAGAGGCGCTTTTCCTCCTCCCAAAGCAAGTATGGTGTTTCTGAAT

               251    -    301
UN50549        --> CTCTGTCCTGTCTCTTTAACGGCCTTGATGTCATCTAATCCAGCATCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX746377       <-- ..................................................
EV552580       <-- CTCTGTCCTGTCTCTTTAACGGCCTTGATGTCATCTAATCCAGCATCTTC
FD961832       --> CTCTGTCCTGTCTCTTTAACGGCCTTGATGTCATCTAATCCAGCATCTTC
FD576074       --> CTCTGTCCTGTCTCTTTAACGGCCTTGATGTCATCTAATCCAGCATCTTC
EV547468       --> CTCTGTCCTGTCTCTTTAACGGCCTTGATGTCATCTAATCCAGCATCTTC
EY926548       --> CTCTGTCCTGTCTCTTTAACGGCCTTGATGTCATCTAATCCAGCATCTTC
EX751639       --> CTCTGTCCTGTCTCTTTAACGGCCTTGATGTCACCTAATCCAGCATCTTC

               301    -    351
UN50549        --> AAAAGCAGAAAACGCATCGGCAGACAAAACCTCCGCCCACTTGTAACTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX746377       <-- ..................................................
EV552580       <-- AAAAGCAGAAAACGCATCGGCAGACAAAACCTCCGCCCACTTGTAACTGT
FD961832       --> AAAAGCAGAAAACGCATCGGCAGACAAAACCTCCGCCCACTTGTAACTGT
FD576074       --> AAAAGCAAAAAACGCATCGGCAGACAAAACCTCCGCCCACTTGTAACTGT
EV547468       --> AAAAGCAGAAAACGCATCGGCAGACAAAACCTCCGCCCACTTGTAACTGT
EY926548       --> AAAAGCAGAAACCGCATCGGCAGACAAAACCTCCGCCCACTTGTAACTGT
EX751639       --> AAAAGCAAAAAACGCATCGGCAGACAAAACCTCCGCCCACTTGTAACTGT

               351    -    401
UN50549        --> AATATCCAGCTGCATAACCGCCTGCAAATATATGGCTGAAGCTACAGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX746377       <-- ..................................................
EV552580       <-- AATATCCAGCTGCATAACCGCCTGCAAATATATGGCTGAAGCTACAGAGG
FD961832       --> AATATCCAGCTGCATAACCGCCTGCAAATATATGGCTGAAGCTACAGAGG
FD576074       --> AATATCCAGCTGCATAACCGCCTGCAAATATATGGCTGAAGCTACAGAGG
EV547468       --> AATATCCAGCTGCATAACCGCCTGCAAATATATGGCTGAAGCTACAGAGG
EY926548       --> AATATCCAGCTGCATAACCGCCTGCAAATATATGGCTGAAGCTACAGAGG
EX751639       --> AATATCCAGCTGCATAACCGCCTGCAAATATATGGCTGAAGCTACAGAGG

               401    -    451
UN50549        --> AATCTATCCTCAGGAAGGGGAGGGATGACTTGTGTCTTCATGGATACCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX746377       <-- ..................................................
EV552580       <-- AATCTATCCTCAGGAAGGGGAGGGATGACTTGTGTCTTCATGGATACCCT
FD961832       --> AATCTATCCTCAGGAAGGGGAGGGATGACTTGTGTCTTCATGGATACCCT
FD576074       --> AATCTATCCTCAGGAAGGGGAGGGATGACTTGTGTCTTCATGGACACCCT
EV547468       --> AATCTATCCTCAGGAAGGGGAGGGATGACTTGTGTCTTCATGGATACCCT
EY926548       --> AATCTATCCTCAGGAAGGGGAGGGATGACTTGTGTCTTCATGGATACCCT
EX751639       --> AATCTATCCTCAGGAAGGGGAGGGATGACTTGTGTCTTCATGGATACCCT

               451    -    501
UN50549        --> TTGATCAACATCGTAAATAGACTCTGTCCCACTTGGCACATATTTCGTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX746377       <-- ..................................................
EV552580       <-- TTGATCAACATCGTAAATAGACTCTGTCCCACTTGGCACATATTTCGTGT
FD961832       --> TTGATCAACATCGTAAATAGACTCTGTCCCACTTGGCACATATTTCGTGT
FD576074       --> TTGATCAACATCGTAAATAGACTCTGTCCCACCTGGCACATATTTTGTGT
EV547468       --> TTGATCAACATCGTAAATAGACTCTGTCCCACTTGGCACATATTTCGTGT
EY926548       --> TTGATCAACATCGTAAATAGACTCTGTCCCACCTGGCACATATTT.....
EX751639       --> TTGATCAACATCGTAAATAGACTCTGTCCCACTTGGCACATATTTCGTGT

               501    -    551
UN50549        --> GCAGCTCCAGATCAACTGTAGCAAACTTCAGCTGACGAAGACTAAGGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX746377       <-- ..................................................
EV552580       <-- GCAGCTCCAGATCAACTGTAGCAAACTTCAGCTGACGAAGACTAAGGGAT
FD961832       --> GCAGTTCCAGATCAACTGTAGCAAACT.......................
FD576074       --> ..................................................
EV547468       --> GCAGCTCCAGATCAACTGTAGCAAACTTCAGCTGACGAAGACTAAGGGAT
EY926548       --> ..................................................
EX751639       --> GCAGCTCCAGATCAACTGTAGCAAACTTCAGCT.................

               551    -    601
UN50549        --> CCTGCACGGAATGTTCTTGCAGCCAGGAGCTTCTTGTACACATTCTCGGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX746377       <-- ..................................................
EV552580       <-- CCTGCACGGAATGTTCTTGCAGCCAGGAGCTTCTTGTACACATTCTCGGG
FD961832       --> ..................................................
FD576074       --> ..................................................
EV547468       --> CCTGCACGGAATGTTCTTGCAGCCAGGAGCTTCTTGTACACATTCTCGGG
EY926548       --> ..................................................
EX751639       --> ..................................................

               601    -    651
UN50549        --> AAGAGATTCCCCTGTTTGATAATGCTTAGCAATGCTCCAATTCAGATTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX746377       <-- ..................................................
EV552580       <-- AAGAGATTCCCCTGTTTGATAATGCTTAGCAATGCTCCAATTCAGATTCG
FD961832       --> ..................................................
FD576074       --> ..................................................
EV547468       --> AAGAGATTCCCCTGTTTGATAATGCTTAGCAATGCTCCAATTCAGATTCG
EY926548       --> ..................................................
EX751639       --> ..................................................

               651    -    701
UN50549        --> AGCTGTGCAACAGAGCACGGATCCCGGGTCTGACATGTTGAGCGTCGACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX746377       <-- ..................................................
EV552580       <-- AGCTGTGCAACAGAGCACGGATCCCGGGTCTGACATGTTGAGCGTCGACG
FD961832       --> ..................................................
FD576074       --> ..................................................
EV547468       --> AGCTGTGCAACAGAGCACGGATCCCGGGTCTGACATGTTGAGCGTCGACG
EY926548       --> ..................................................
EX751639       --> ..................................................

               701    -    751
UN50549        --> ACGTCGAACGGAGGGAACTCGAAGTTTTTCAACAGAGGATTTGAGGAGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX746377       <-- ..................................................
EV552580       <-- ACGTCGAACGGAGGGAACTCGAAGTTTTTCAACAGAGGATTTGAGGAGAG
FD961832       --> ..................................................
FD576074       --> ..................................................
EV547468       --> ACGTCGAACGGAGGGAACTCGAAGTTTTTCAACAGAGGATTTGAGGAGAG
EY926548       --> ..................................................
EX751639       --> ..................................................

               751    -    801
UN50549        --> AGAATCTTCGGAAGCCATGAGGTGAACGATAGAGAGAGAGAATGAGAGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EX746377       <-- ..................................................
EV552580       <-- AGAATCTTCGGAAGCCATGAGGTGAACGATAGAGAGAGAGAATGAGAGTT
FD961832       --> ..................................................
FD576074       --> ..................................................
EV547468       --> AGAATCTTCGGAAGCCATGAGGTGAACGATAGAGAGAGAGAATGAGAGTT
EY926548       --> ..................................................
EX751639       --> ..................................................

               801    -    851
UN50549        --> GGAGGCAGTGCCCC
                   ~~~~~~~~~~~~~~
EX746377       <-- ..............
EV552580       <-- GGAGGCAGTGCCCC
FD961832       --> ..............
FD576074       --> ..............
EV547468       --> GGAGGCAGTGCCCC
EY926548       --> ..............
EX751639       --> ..............