1      -     51
UN50910        --> GCTTCAAATATTATCTACCTTCCCACACTTGTTTTACATCCACATGAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940332       <-- ..................................................
FD562231       <-- ..................................................
EV568079       <-- ..................................................
EX897935       <-- ..................................................
EY926462       --> GCTTCAAATATTATCTACCTTCCCACACTTGTTTTACATCCACATGAAAA
EX901601       --> ...................................gCATCCACATGAAAA
FD566182       --> ..................................................
EX893339       --> ..................................................
FY443059       --> ..................................................
EX907457       --> ..................................................

               51     -    101
UN50910        --> GAAATTTAAATATGTTTGTTTTCTCTTGATCAAAACAAAACTATATAAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940332       <-- ..................................................
FD562231       <-- ..................................................
EV568079       <-- ..................................................
EX897935       <-- ..................................................
EY926462       --> GAAATTTAAATATGTTTGTTTTCTCTTGATCAAAACAAAACTATATAAAA
EX901601       --> GAAATTTAAATATGTTTGTTTTCTCTTGATCAAAACAAAACTATATAAAA
FD566182       --> .......................................gCTATATAAAA
EX893339       --> ..........................................acATAAAA
FY443059       --> ..............................................AAAA
EX907457       --> ..................................................

               101    -    151
UN50910        --> TGATTTGAACATTAATCATGATAACACATGTATATGTTTTCAATGTACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940332       <-- ..................................................
FD562231       <-- ..................................................
EV568079       <-- ..................................................
EX897935       <-- ..................................................
EY926462       --> TGATTTGAACATTAATCATGATAGCACATGTATATGTTTTCAATGTACTT
EX901601       --> TGATTTGAACATTAATCATGATAGCACATGTATATGTTTTCAATGTACTT
FD566182       --> TGATTTGAACATTAATCATGATAATACATGTATATGTTTTCAATGTACTT
EX893339       --> TGATTTGAACATTAATCATGATAATACATGTATATGTTTTCAATGTACTT
FY443059       --> TGATTTGAA-ATTAATCATGATAACACATGTATATGTTTTCAATGTACTT
EX907457       --> ......ggACATTAATCATGATAACACATGTATATGTTTTCAATGTACTT

               151    -    201
UN50910        --> TCTGACCATGAAAACATAGTTCTGTCTGCCTTAAGCAGCAACTTCTTGGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940332       <-- ................................................gg
FD562231       <-- ..................................................
EV568079       <-- ..................................................
EX897935       <-- ..................................................
EY926462       --> TCTGACCATGAAAACATAGTTCTGTCTGCCTTAAGCAGCAACTTCTTGGT
EX901601       --> TCTGACCATGAAAACATAGTTCTGTCTGCCTTAAGCAGCAACTTCTTGGT
FD566182       --> TCTGACCATGAAAACATAATTCTGTCTGCCTTAAGCAGCAACTTCTTGGT
EX893339       --> TCTGACCATGAAAACATAATTCTGTCTGCCTTAAGCAGCAACTTCTTGGT
FY443059       --> TCTGACCATGAAAACATAGTTCTGTCTGCCTTAAGCAGCAACTTCTTGGT
EX907457       --> TCTGACCATGAAAACATAGTTCTGTCTGCCTTAAGCAGCAACTTCTTGGT

               201    -    251
UN50910        --> CCTTGGACGAAAGCTGGTTCTGAATATGCTGAGGAACAACATCGAACTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940332       <-- tCTTGGACGAAAGCTGGTTCTGAATATGCTGAGGAACAACATCGAACTTA
FD562231       <-- .tcttGACGAAAGCTGGTTCTGAATATGCTGAGGAACAACATCGAACTTA
EV568079       <-- ..................................................
EX897935       <-- ..................................................
EY926462       --> CCTTGGACGAAAGCTGGTTCTGAATATGCTGAGGAACAACATCGAACTTA
EX901601       --> CCTTGGACGAAAGCTGGTTCTGAATATGCTGAGGAACAACATCGAACTTA
FD566182       --> CCTTGGACGAAAGCTGGTTCTGAATATGCTGAGGAACAACATCGAACTTA
EX893339       --> CCTTGGACGAAAGCTGGTTCTGAATATGCTGAGGAACAACATCGAACTTA
FY443059       --> CCTTGGACGAAAGCTGGTTCTGAATATGCTGAGGAACAACATCGAACTTA
EX907457       --> CCTTGGACGAAAGCTGGTTCTGAATATGCTGAGGAACAACATCGAACTTA

               251    -    301
UN50910        --> GCCAACTGCATTGTGTAAGACGCACGACCTTTTGTCATCCCTCTCAATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940332       <-- GCCAACTGCATTGTGTAAGACGCACGACCTTTTGTCATCCCTCTCAATGT
FD562231       <-- GCCAACTGCATTGTGTAAGACGCACGACCTTTTGTCATCCCTCTCAATGT
EV568079       <-- ..................................................
EX897935       <-- ..................................................
EY926462       --> GCCAACTGCATTGTGTAAGACGCACG........................
EX901601       --> GCCAACTGCATTGTGTAAGACGCACGACCTTTTGTCATCCCTCTCAATGT
FD566182       --> GCCAACTGCATTGTGTAAGACGCACGACCTTTTGTCATCCCTCTCAATGT
EX893339       --> GCCAACTGCATTGTGTAAGACGCACGACCTTTTGTCATCCCTCTCAATGT
FY443059       --> GCCAACTGCATTGTGTAAGACGCACGACCTTTTGTCATCCCTCTCAATGT
EX907457       --> GCCAACTGCATTGTGTAAGACGCACGACCTTTTGTCATCCCTCTCAATGT

               301    -    351
UN50910        --> ACTCACATACTGAAACATCTCTGCTAATGGAACCAGAGAATCCACCACCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940332       <-- ACTCACATACTGAAACATCTCTGCTAATGGAACCAGAGAATCCACCACCT
FD562231       <-- ACTCACATACTGAAACATCTCTGCTAATGGAACCAGAGAATCCACCACCT
EV568079       <-- ..................................................
EX897935       <-- ..................................................
EY926462       --> ..................................................
EX901601       --> ACTCACATACTGAAACATCTCTGCTAATGGAACCAGAGAATCCACCACCT
FD566182       --> ACTCACATACTGAAACATCTCTGCTAATGGAACCAGAAAATCCACCACCT
EX893339       --> ACTCACATACTGAAACATCTCTGCTAATGGAACCAGAGAATCCACCACCT
FY443059       --> ACTCACATACTGAAACATCTCTGCTAATGGAACCAGAGAATCCACCACCT
EX907457       --> ACTCACATACTGAAACATCTCTGCTAATGGAACCAGAGAATCCACCACCT

               351    -    401
UN50910        --> TGAGACCACCGGGTTTGTCTCCAAAGCTGTTGATCTGACCTCTTCTGGAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940332       <-- TGAGACCACCGGGTTTGTCTCCAAAGCTGTTGATCTGACCTCTTCTGGAG  Raphanus sativus cv Early Scarlet Globe
FD562231       <-- TGAGACCACCGGGTTTGTCTCCAAAGCTGTTGATCTGACCTCTTCTAGAG  Raphanus sativus var. oleiformis
EV568079       <-- ...................................TGACCTCTTCTAGAG  Raphanus raphanistrum subsp. landra
EX897935       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
EY926462       --> ..................................................  Raphanus sativus var. oleiformis
EX901601       --> TGAGACCACCGGGTTTGTCTCCAAAGCTGTTGATCTGACCTCTTCTGGAG  Raphanus sativus cv Early Scarlet Globe
FD566182       --> TGAGACCACCGGGTTTGTCTCCAAAGCTGTTGATCTGACCTCTTCTAGAG  Raphanus sativus var. oleiformis
EX893339       --> TGAGACCACCGGGTTTGTCTCCAAAGCTGTTGATCTGACCTCTTCTAGAG  Raphanus sativus var. oleiformis
FY443059       --> TGAGACCACCGGGTTTGTCTCCAAAGCTGTTGATCTGACCTCTTCTGGAG  Raphanus sativus cv GSK3-1
EX907457       --> TGAGACCACCGGGTTTGTCTCCAAAGCTGTTGATCTGACCTCTTCTGGAG  Raphanus sativus cv Rat-Tail Radish #3870

               401    -    451
UN50910        --> TTAAGATCACCAA-TGACATCACCAAGATGTTCTTCAGGTGTAACAACTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940332       <-- TTAAGATCACCAA-TGACATCACCAAGATGTTCTTCAGGTGTAACAACTT
FD562231       <-- TTAAGATCACCAA-TGACATCACCAAGATGTTCTTCAGGTGTAACAACTT
EV568079       <-- TTAAGATCACCAAATGACATCACCAAGATGTTCTTCAGGTGTAACAACTT
EX897935       <-- .................CATCACCAAGATGTTCTTCAGGTGTAACAACTT
EY926462       --> ..................................................
EX901601       --> TTAAGATCACCAA-TGACATCACCAAGATGTTCTTCAGGTGTAACAACTT
FD566182       --> TTAAGATCACCAA-TGACATCACCAAGATGTTCTTCAGGTGTAACAACTT
EX893339       --> TTAAGATCACCAA-TGACATCACCAAGATGTTCTTCAGGTGTAACAACTT
FY443059       --> TTAAGATCACCAA-TGACATCACCAAGATGTTCTTCAGGTGTAACAACTT
EX907457       --> TTAAGATCACCAA-TGACATCACCAAGATGTTCTTCAGGTGTAACAACTT

               451    -    501
UN50910        --> CAACTCTCATGATAGGTTCAAGCATTCTCGGACCAGCTTTCCTCATCCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940332       <-- CAACTCTCATGATAGGTTCAAGCATTCTCGGACCAGCTTTCCTCATCCCT
FD562231       <-- CAACTCTCATGATAGGTTCAAGCATTCTCGGACCAGCTTTCCTCATCCCT
EV568079       <-- CAACTCTCATGATAGGTTCAAGCATTCTCGGACCAGCTTTCCTCATCCCT
EX897935       <-- CAACTCTCATGATAGGTTCAAGCATTCTCGGACCAGCTTTCCTCATCCCT
EY926462       --> ..................................................
EX901601       --> CAACTCTCATGATAGGTTCAAGCATTCTCGGACCAGCTTTCCTCATCCCT
FD566182       --> CAACTCTCATGATAGGTTCAAGCATTCTCGGACCAGCTTTCCTCATCCCT
EX893339       --> CAACTCTCATGATAGGTTCAAGCATTCTCGGACCAGCTTTCCTCATCCCT
FY443059       --> CGACTCTCATGATAGGTTCAAGCATTCTCGGACCAGCTTTCCTCATCCCT
EX907457       --> CGACTCTCATGATAGGTTCAAGCATT-TCGGACCAGCTTTCCTCATCCCT

               501    -    551
UN50910        --> TCACGGAAAGCTCCTCTCGCAGCTAGCTGGAAAGCTAGCACGCTCGAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940332       <-- TCACGGAAAGCTCCTCTCGCAGCTAGCTGGAAAGCTAGCACGCTCGAGTC
FD562231       <-- TCACGGAAAGCTCCTCTCGCAGCTAGCTGGAAAGCTAGCACGCTCGAGTC
EV568079       <-- TCACGGAAAGCTCCTCTCGCAGCTAGCTGGAAAGCTAGCACGCTCGAGTC
EX897935       <-- TCACGGAAAGCTCCTCTCGCAGCTAGCTGGAAAGCTAGCACGCTCGAGTC
EY926462       --> ..................................................
EX901601       --> TCACGGAAAGCTCCTCTCGCAGCTAGCTGGAAAGCTAGCACGCTCGAGTC
FD566182       --> TCACGGAAAGCTCCTCTCGCAGCTAGCTGGAAAGCTAGCACGCTCGAGTC
EX893339       --> TCACGGAAAGCTCCTCTCGCAGCTAGCTGGAAAGCTAGCACGCTCGAGTC
FY443059       --> TCACGGAAAGCTCCTCTCGCAGCTAGCTGGAAAGCTAGCACGCTCGAGTC
EX907457       --> TCACGGAAAGCTCCTCTCGCAGCTAGCTGGAAAGCTAGCACGCTCGAGTC

               551    -    601
UN50910        --> CACATCATGGTATGATCCATCAACTAGACAAGCACGGACGTCAACAACCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940332       <-- CACATCATGGTATGATCCATCAACTAGACAAGCACGGACGTCAACAACCG
FD562231       <-- CACATCATGGTATGATCCATCAACTAAACAAGCACGGACGTCAACAACCG
EV568079       <-- CACATCATGGTATGATCCATCAACTAGACAAGCACGGACGTCAACAACCG
EX897935       <-- CACATCATGGTATGATCCATCAACTAGACAAGCACGGACGTCAACAACCG
EY926462       --> ..................................................
EX901601       --> CACATCATGGTATGATCCATCAACTAGACAAGCACGGACGTCAACAACCG
FD566182       --> CACATCATGGTATGATCCATCAACTAAACAAGCACGGACGTCAACAACCG
EX893339       --> CACATCATGGTATGATCCATCAACTAGACAAGCACGGACGTCAACAACCG
FY443059       --> CACATCATGGTATGATCCATCAACTAGACAAGCACGGACATCGACAACAG
EX907457       --> CACATCATGGTATGATCCATCAACTAGACAAGCACGGACGTCAACAACCG

               601    -    651
UN50910        --> GAAAACCCGCAAGCACACCTGAGCCCATACACTCCTCAAGTCCTTTCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940332       <-- GAAAACCCGCAAGCACACCTGAGCCCATACACTCCTCAAGTCCTTTCATC
FD562231       <-- GAAAACCCGCAAGCACACCTGAGCCCATACACTCCTCAAGTCCTTTCATC
EV568079       <-- GAAAACCCGCAAGCACACCTGAGCCCATACACTCCTCAAGTCCTTTCATC
EX897935       <-- GAAAACCCGCAAGCACACCTGAGCCCATACACTCCTCAAGTCCTTTCATC
EY926462       --> ..................................................
EX901601       --> GAAAACCCGCAAGCACACCTGAGCCCATACACTCCTCAAGTCCTTTCATC
FD566182       --> GAAAACCCGCAAGCACACCTGAGCCCATACACTCCTCAAGTCCTTTCATC
EX893339       --> GAAAACCCGCAAGCACACCTGGGCCCATACCCTCCTCAAGTCCTTTCATC
FY443059       --> GAAAACCCGCAAGCACACCTGAGCCCATACACTCCTCAAGTCCTTTCATC
EX907457       --> GAAAACCCGCAAGCACACCTGAGCCCATACACTCCTCAAGTCCTTTCATC

               651    -    701
UN50910        --> ACACCGGGGATATACTCTCTCGGCACCGCTCCTCCTTTGATCTCACTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940332       <-- ACACCGGGGATATACTCTCTCGGCACCGCTCCTCCTTTGATCTCACTCTT  Raphanus sativus cv Early Scarlet Globe
FD562231       <-- ACACCGGGGATATACTCTCTTGGCACTGCTCCTCCTTTGATCTCACTCTT  Raphanus sativus var. oleiformis
EV568079       <-- ACACCGGGGATATACTCTCTTGGCACCGCTCCTCCTTTGATCTCACTCTT  Raphanus raphanistrum subsp. landra
EX897935       <-- ACACCGGGGATATACTCTCTCGGCACCGCTCCTCCTTTGATCTCACTCTT  Raphanus sativus cv Early Scarlet Globe
EY926462       --> ..................................................  Raphanus sativus var. oleiformis
EX901601       --> ACACCGGGGATATACTCTCTCGGCACCGCTCCTCCTTTGATCTCACTCTT  Raphanus sativus cv Early Scarlet Globe
FD566182       --> ACACCGGGGATATACTCTCTTGGCACTGCTCCTCCTTTGATCTCACTCTT  Raphanus sativus var. oleiformis
EX893339       --> ACACCGGGGATATACTCTCTTGGCACTGCTCCTCCTTTGATCTCACTCTT  Raphanus sativus var. oleiformis
FY443059       --> ACACCGGGGATATACTCTCTCGGCACCGCTCCTCCTTTGATCTCACTCTT  Raphanus sativus cv GSK3-1
EX907457       --> ACACCGGGGATATACTCTCTCGGCACCGCTCCTCCTTTGATCTCACTCTT  Raphanus sativus cv Rat-Tail Radish #3870

               701    -    751
UN50910        --> GAACTCGTATCCTGATCCTGCTTCCAACGGCTCAAACCTGACTGTAATAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940332       <-- GAACTCGTATCCTGATCCTGCTTCCAACGGCTCAAACCTGACTGTAATAT
FD562231       <-- GAACTCGTATCCTGATCCTGCTTCCAACGGCTCAAACCTGACTGTAATAT
EV568079       <-- GAACTCGTATCCTGATCCTGCTTCCAACGGCTCAAACCTGACTGTAATAT
EX897935       <-- GAACTCGTATCCTGATCCTGCTTCCAACGGCTCAAACCTGACTGTAATAT
EY926462       --> ..................................................
EX901601       --> GAACTCGTATCCTGATCCTGCTTCCAACGGCTCAAACCTGACTGTAATAT
FD566182       --> GAACTCGTATCCTGATCCTGCTTCCAACGGCTCAAACCTGACTGTAATAT
EX893339       --> GAACTCGTATCCTGATCCTGCTTCCAACGGCTCAAACCTGACTGTAATAT
FY443059       --> GAACTCGTATCCTGATCCTGCTTCCAACGGCTCAAACCTGACTGTAATAT
EX907457       --> GAACTCGTATCCTGATCCTGCTTCCAACGGCTCAAACCTGACTGTAATAT

               751    -    801
UN50910        --> CAGCAAACTGTCCTTGTCCACCTGATTGCTTCTTGTGTGTGTATTTCACT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940332       <-- CAGCAAACTGTCCTTGTCCACCTGATTGCTc...................  Raphanus sativus cv Early Scarlet Globe
FD562231       <-- CAGCAAACTGTCCTTGTCCACCTGATTGCTTCTTGTGTGTGTATTTCACT  Raphanus sativus var. oleiformis
EV568079       <-- CAGCAAACTGTCCTTGTCCACCTGATTGCTTCTTGTGTGTGTATTTCACT  Raphanus raphanistrum subsp. landra
EX897935       <-- CAGCAAACTGTCCTTGTCCACCTGATTGCTTCTTGTGCGTGTACTTCACT  Raphanus sativus cv Early Scarlet Globe
EY926462       --> ..................................................  Raphanus sativus var. oleiformis
EX901601       --> CAGCAAACTGTCCTTGTCCACCTGATTGCTTCTTGTGCGTGTACTTCACT  Raphanus sativus cv Early Scarlet Globe
FD566182       --> CAGCAAACTGTCCTTGTCCACCTGATTGCTTCTTGTGTGTGTATTTCACT  Raphanus sativus var. oleiformis
EX893339       --> CAGCAAACTGTCCTTGTCCACCTGATTGCTTCTTGTGTGTGTATTTCACT  Raphanus sativus var. oleiformis
FY443059       --> CAGCAAACTGTCCTTGTCCACCTGATTGCTTCTTGTGTGTGTATTTCACT  Raphanus sativus cv GSK3-1
EX907457       --> CAGCAAACTGACCTTGTCCACCTGATTGCTTCTTGTGTGTGTACTTCACT  Raphanus sativus cv Rat-Tail Radish #3870

               801    -    851
UN50910        --> TCAGCTACTTTTGAGATACTCTCACGGTAGTTCACTTGCGGTGCTCCAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940332       <-- ..................................................
FD562231       <-- TCAGCTACTTTTGAGATACTCTCACGGTAGTTCACTTGCGGTGCTCCAAC
EV568079       <-- TCAGCTACTTTTGAGATAC...............................
EX897935       <-- TCAGCTACTTTTGAGATACTCTCACGGTAGTTCACTTGCGGTGCTCCAAC
EY926462       --> ..................................................
EX901601       --> TCAGCTACTTTTGAGATACTCT............................
FD566182       --> TCAGCTACTTTTGAGATACTCTCACGG.......................
EX893339       --> TCAGCTACTTTTGAGATACTCTCACGGTAGTTCACTTGCGGTGCTCCAAC
FY443059       --> TCAGCTACTTTTGAGATACTCTCACGGTAGTTCACTTGCGGTGCTCCAAC
EX907457       --> TCAGCTACTTTTGAGATACTCTCGCGGTAGTTCACTTGCGGTGCTCCAAC

               851    -    901
UN50910        --> GTTCGCCTCAACCTTGAACTCTCTTTTAAGCCTGTCGACGATGATCTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940332       <-- ..................................................
FD562231       <-- GTTCGCCTCAACCTTGAACTCTCTTTTAAGCCTGTCGACGATGATCTCAA
EV568079       <-- ..................................................
EX897935       <-- GTTCGCCTCAACCTTGAACTCTCTTTTAAGCCTGTCGACGATGATCTTAA
EY926462       --> ..................................................
EX901601       --> ..................................................
FD566182       --> ..................................................
EX893339       --> GTTCGCCTCAACCTTGAACTCTCTTTTAAGCCTGTCGACGATGATCTCAA
FY443059       --> GTTCGCCTCAACCTTGAACTCTCTTTTAAGCCTGTCGACGATGATCTCAA
EX907457       --> GTTCGCCTCAACCTTGAACTCTCTTT........................

               901    -    951
UN50910        --> GATGAAGCTCTCCCATCCCTTCGATGACGGTTTGGTTCATCTCTTCGTCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940332       <-- ..................................................
FD562231       <-- GATGAAGCTCTCCCATCCCTTCGATGACGGTTTGGTTCATCTCCTCATCG
EV568079       <-- ..................................................
EX897935       <-- GATGAAGCTCTCCCATCCCTTCAATGACGGTTTGGTTCATCTCTTCGTCA
EY926462       --> ..................................................
EX901601       --> ..................................................
FD566182       --> ..................................................
EX893339       --> -ATGAAGCT.........................................
FY443059       --> GATGAAGCTCTCCCATCCCTTCGATGACGG....................
EX907457       --> ..................................................

               951    -   1001
UN50910        --> CGTGAGAAATGGAAAGACGGTCTTCTTGAGCGAGCTTGATCAGTCCTGTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940332       <-- ..................................................
FD562231       <-- CGTGAAAAA.........................................
EV568079       <-- ..................................................
EX897935       <-- CGTGAGAAATGGAAAGACGGTCTTCTTGAGCGAGCTTGATCAGTCCTGTA
EY926462       --> ..................................................
EX901601       --> ..................................................
FD566182       --> ..................................................
EX893339       --> ..................................................
FY443059       --> ..................................................
EX907457       --> ..................................................

               1001   -   1051
UN50910        --> GCCATTTTATCAATGTCTGCTTTCGTTTTTGGCACAATCGCCACCTTGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940332       <-- ..................................................
FD562231       <-- ..................................................
EV568079       <-- ..................................................
EX897935       <-- GCCATTTTATCAATGTCTGCTTTCGTTTTTGGCACAATCGCCACCTTGAT
EY926462       --> ..................................................
EX901601       --> ..................................................
FD566182       --> ..................................................
EX893339       --> ..................................................
FY443059       --> ..................................................
EX907457       --> ..................................................

               1051   -   1101
UN50910        --> GACGGGATCAGGGAAGTCCATACGCTCAAGGACAACAGGGCTTTCTGGAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EY940332       <-- ..................................................
FD562231       <-- ..................................................
EV568079       <-- ..................................................
EX897935       <-- GACGGGATCAGGGAAGTCCATACGCTCAAGGACAACAGGGCTTTCTGGAT
EY926462       --> ..................................................
EX901601       --> ..................................................
FD566182       --> ..................................................
EX893339       --> ..................................................
FY443059       --> ..................................................
EX907457       --> ..................................................

               1101   -   1151
UN50910        --> CC
                   ~~
EY940332       <-- ..
FD562231       <-- ..
EV568079       <-- ..
EX897935       <-- CC
EY926462       --> ..
EX901601       --> ..
FD566182       --> ..
EX893339       --> ..
FY443059       --> ..
EX907457       --> ..