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Alignment for radish unigene UN51415

               1      -     51
UN51415        --> ATAGAATTGAAATGAAGTTTTATTAGAGGACTAAAACATTATTTGTGATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535706       <-- ..........................AGGACTAAAACATTATTTGTGATC
EW731771       <-- ..................................................
EY900021       <-- ..................................................
FD576384       <-- ..................................................
FD564366       <-- ..................................................
FD572349       <-- ..................................................
FD580883       --> ATAGAATTGAAATGAAGTTTTATTAGAGGACTAAAACATTATTTGTGATC
EY895671       --> .......................TAGAGGACTAAAACATTATTTGTGATC
FY445380       --> .........................GAGGACTAAAACATTATTTGTGATC
FD576008       --> ..............................................GATC
EW736411       --> ..................................................
FD567867       --> ..................................................

               51     -    101
UN51415        --> ACAAATCTCTCACACATTCACTCTTATCTTTGAAAATGTTCAGCGTCTCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535706       <-- ACAAATCTCTCACACATTCACTCGTATCTT-GAAAATGTTCAGCGTCTCT
EW731771       <-- ..................................................
EY900021       <-- ..................................................
FD576384       <-- ..................................................
FD564366       <-- ..................................................
FD572349       <-- ..................................................
FD580883       --> ACAAATCTCTCACACATTCACTCTTATCTTTGAAAATATTTAGCGTCTCT
EY895671       --> ACAAATCTCTCACACATTCACTCGTATCTTTGAAAATGTTCAGCGTCTCT
FY445380       --> ACAAATCTCTCACACATTCACTCTTATCTTTGAAAATGTTCAGCGTCTCT
FD576008       --> ACAAATCTCTCACACATTCACTCGTATCTTTGAAAATGTTCAGCGTCTCT
EW736411       --> .CAAATCTCTCACACATTCACTCTTATCTTTGAAAATGTTCAGCGTCTCT
FD567867       --> ......................ggTATCTTTGAAAATGTTCAGCGTCTCT

               101    -    151
UN51415        --> CACCTGATATAACCAACAAACAAAGTCTGTAACAAAACAAGACCAAGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535706       <-- CACCTGATATAACCAACAAACAAAGTCTGTAACAAAACAAGACCAAGAAA
EW731771       <-- ..................................................
EY900021       <-- ..................................................
FD576384       <-- ..................................................
FD564366       <-- ..................................................
FD572349       <-- ..................................................
FD580883       --> CACCTGATATAACCAACAAACAAAGTCTGTAACAAAACATGACCAAGAAA
EY895671       --> CACCTGATATAACCAACAAACAAAGTCTGTAACAAAACAAGACCAAGAAA
FY445380       --> CACCTGATATAACCAACAAACAAAGTCTGTAACAAAACAAGACCAAGAAA
FD576008       --> CACCTGATATAACCAACAAACAAAGTCTGTAACAAAACAAGACCAAGAAA
EW736411       --> CACCTGATATAACCAACAAACAAAGTCTGTAACAAAACAAGACCAAGAAA
FD567867       --> CACCTGATATAACCAACAAACAAAGTCTGTAACAAAACAAGACCAAGAAA

               151    -    201
UN51415        --> AACAAGACAAGAACCACAGTTAGTTGAAGACATGTCTTAACCACAATCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535706       <-- AACAAGACAAGAACCACAGTTAGTTGAAGACATGTCTTAACCACAATCAA
EW731771       <-- AACAAAACAAGAACCACAATTAGT-GAAGACATGTCTTAACCACAATCAA
EY900021       <-- ..................................................
FD576384       <-- ..................................................
FD564366       <-- ..................................................
FD572349       <-- ..................................................
FD580883       --> AACAAAACAAGAACCACAATTAGTTGAAGACATGTCTTAACCACAATCAA
EY895671       --> AACGAGACAAGAACCACAGTTAGTTGAAGACATGTCTTAACCACAATCAA
FY445380       --> AACAAGACAAGAACCACAGTTAGTTGAAGACATGTCTTAACCACAATCAA
FD576008       --> AACAAGACAAGAGCCACAGTTAGTTGAAGAAATGTCTTAACCACAATCAA
EW736411       --> AACAAAACAAGAACCACAATTAGTTGAAGACATGTCTTAACCACAATCAA
FD567867       --> AACAAGACAAGAACCACAGTTAGTTGAAGACATGTCTTAACCACAATCAA

               201    -    251
UN51415        --> GAACCTCATTAGTTCAATTAAGTGAACTAAGAAACTCAACCCAAATATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535706       <-- GAACCTCATTAGTTCAATTAAGTGAACTAAGAAACTCAACCCAAATATGT
EW731771       <-- GAAC-TCATTAGTTCAATTAAGTGAACTAAGAAACTCAACCCAAATATGT
EY900021       <-- ........TTAGTTCAATTAAGTGAACTAAGAAACTCAACCCAAATATGT
FD576384       <-- ..................................................
FD564366       <-- ..................................................
FD572349       <-- ..................................................
FD580883       --> GAACCTCATTAGTTCAATTAAGTGAACTAAGAAACTCAACCCAAATATGT
EY895671       --> GAACCTCATTAGTTCAATTAAGTGAACTAAGAAACTCAACCCAAATATGT
FY445380       --> GAACCTCATTAGTTCAATTAAGTGAACTAAGAAACTCAACCCAAATATGT
FD576008       --> GAACCTCATTAGTTCAATTAAGTGAACTAAGAAACTCAACCCAAATATGT
EW736411       --> GAACCTCATTAGTTCAATTAAGTGAACTAAGAAACTCAACCCAAATATGT
FD567867       --> GAACCTCATTAGTTCAATTAAGTGAACTAAGAAACTCAACCCAAATATGT

               251    -    301
UN51415        --> TCTGCTCTCTTGGTCGTCTCAAGAGCGAACTCCTCAGCAGCTTGCTCGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535706       <-- TCTGCTCTCTTGGTCGTATCAAGAGCGAACTCCTCAGCAGCTTGCTCGTC
EW731771       <-- TCTGCTCTCTTGGTCGTCTCAAGAGCGAACTCCTCAGCAGCTTGCTCGTC
EY900021       <-- TCTGCTCTCTTGGTCGTCTCAAGAGCGAACTCCTCAGCAGCTTGCTCGTC
FD576384       <-- ..................................................
FD564366       <-- ..................................................
FD572349       <-- ..................................................
FD580883       --> TCTGCTCTCTTGGTCGTCTCAAGAGCGAACTCCTCAGCAGCTTGCTCGTC
EY895671       --> TCTGCTCTCTTGGTCGTCTCAAGAGCGAACTCCTCAGCAGCTTGCTCGTC
FY445380       --> TCTGCTCTCTTGGTCGTCTCAAGAGCGAACTCCTCAGCAGCTTGCTCGTC
FD576008       --> TCTGCTCTCTTGGTCGTCTCAAGAGCGAACTCCTCAGCAGCTTGCTCGTC
EW736411       --> TCTGCTCTCTTGGTCGTCTCAAGAGCGAACTCCTCAGCAGCTTGCTCGTC
FD567867       --> TCTGCTCTCTTGGTCGTCTCAAGAGCGAACTCCTCAGCAGCTTGCTCGTC

               301    -    351
UN51415        --> CTTCGCCTTACGCACAGCCACGTGATACTCTTCATAAGCCTGAGAAGCCT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535706       <-- CTTCGCCTTACGCACAGCCACGTGATACTCTTCATAAGCCTGAGAAGCCT
EW731771       <-- TTTCGCTTTACGCACAGCCACGTGATACTCTTCATAAGCCTGAGAAGCCT
EY900021       <-- CTTCGCCTTACGCACAGCCACGTGATACTCTTCATAAGCCTGAGAAGCCT
FD576384       <-- ...........................................GAAGCCT
FD564366       <-- ..................................................
FD572349       <-- ..................................................
FD580883       --> CTTCGCCTTACGCACAGCCACGTGATACTCTTCATAAGCCTGAGAAGCCT
EY895671       --> CTTCGCCTTACGCACAGCCACGTGATACTCTTCATAAGCCTGAAAAGCCT
FY445380       --> CTTCGCCTTACGCACAGCCACATGATACTCTTCATAAGCCTGAGAAGCCT
FD576008       --> CTTCGCCTTACGCACAGCCACATGATACTCTTCATAAGCCTGAGAAGCCT
EW736411       --> CTTCGCCTTACGCACAGCCACGTGATACTCTTCATAAGCCTGAGAAGCCT
FD567867       --> CTTCGCCTTACGCACAGCCACATGATACTCTTCATAAGCCTGAGAAGCCT

               351    -    401
UN51415        --> CCTTTAGAAGCCGTGCTAGGTTAGTCTCCGTAGACTTAAACTTAAGATCA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535706       <-- CCTTAAGAAGCCGTGCTAGATTGGTCTCCGTAGACTTAAACTTAAGATCA
EW731771       <-- CCTTTAGAAGCCGTGCTAGGTTAGTCTCCGCAGACTTAAACTTAAGATCA
EY900021       <-- CCTTAAGAAGCCGTGCTAGATTGGTCTCCGTAGACTTAAACTTAAGATCA
FD576384       <-- CCTTTAGAAGCCGTGCTAGGTTAGTCTCCGTAGACTTAAACTTAAGATCA
FD564366       <-- ..................................................
FD572349       <-- ..................................................
FD580883       --> CCTTTAGAAGCCGTGCTAGGTTAGTCTCCGTAGACTTAAACTTAAGATCA
EY895671       --> CCTTAAGAAGCCGTGCTAGATTGGTCTCCGTAAACTTAAACTTAAGATCA
FY445380       --> CCTTTAGAAGCCGTGCTAGGTTAGTCTCCGTAGACTTAAACTTAAGATCA
FD576008       --> CCTTAAGAAGCCGTGCTAGGTTAGTCTCCGTAGACTTAAACTTAAGATCA
EW736411       --> CCTTTAGAAGCCGTGCTAGGTTAGTCTCCGCAGACTTAAACTTAAGATCA
FD567867       --> CCTTAAGAAGCCGTGCTAGGTTAGTCTCCGTAGACTTAAACTTAAGATCA

               401    -    451
UN51415        --> ATGTTCAGTTTCTCTGCTTCAAGCTTAACCAACAGTTTCTTGATCGCAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535706       <-- ATGTTCAGTTTCTCTGCTTCAAGCTTAACCAACAGTTTCTTGATCGCAAA
EW731771       <-- ATGTTCAGTTTCTCTGCTTCAAGCTTAACCAACAGTTTCTTGATCGCAAA
EY900021       <-- ATGTTCAGTTTCTCTGCTTCAAGCTTAACCAACAGTTTCTTGATCGCAAA
FD576384       <-- ATGTTCAGTTTCTCTGCTTCAAGCTTAACCAACAGTTTCTTAATCGCAAA
FD564366       <-- ..................................................
FD572349       <-- ..................................................
FD580883       --> ATGTTCAGTTTCTCTGCTTCAAGCTTAACCAACAGTTTCTTAATCGCAAA
EY895671       --> ATGTTCAGTTTCTCTGCTTCAAGCTTAACCAACAGTTTCTTGATCGCAAA
FY445380       --> ATGTTCAGTTTCTCTGCTTCAAGCTTAACCAACAGTTTCTTGATCGCAAA
FD576008       --> GTGTTCAGTTTCTCTGCTTCAAGCTTAACCAACAGTTTCTTGATCGCAAA
EW736411       --> ATGTTCAGTTTCTCTGCTTCAAGCTTAACCAACAGTTTCTTGATCGCAAA
FD567867       --> ATGTTCAGTTTCTCTGCTTCAAGCTTAACCAACAGTTTCTTGATCGCAAA

               451    -    501
UN51415        --> GATTTTGATAGACAACGCGTCTCCTCCTTGAGCAAGAGTCTTGGCGAATG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535706       <-- GATTTTGATAGACAACGCGTCTCCTCCTTGAGCAAGAGTCTTGGCGAATG
EW731771       <-- GATTTTGATAGACAACGCGTCTCCTCCTTGAGCAAGAGTCTTGGCGAATG
EY900021       <-- GATTTTGATAGACAACGCGTCTCCTCCTTGAGCAAGAGTCTTGGCGAATG
FD576384       <-- GATTTTGATAGACAACGCGTCTCCTCCTTGAGCAAGAGTCTTGGCGAATG
FD564366       <-- .................................................G
FD572349       <-- ..................................................
FD580883       --> GATTTTGATAGACAACGCGTCTCCTCCTTGAGCAAGAGTCTTGGCGAATG
EY895671       --> GATTTTGATAGACAACGCGTCTCCTCCTTGAGCAAGAGTCTTGGCGAATG
FY445380       --> GATTTTGATAGACAACGCGTCTCCTCCTTGAGCTAGAGTCTTGGCGAATG
FD576008       --> GATTTTGATAGACAACGCGTCTCCTCCTTGAGCAAGAGTCTTGGCGAATG
EW736411       --> GATTTTGATAGACAACGCGTCTCCTCCTTGAGCAAGAGTCTTGGCGAATG
FD567867       --> GATTTTGATAGACAACGCGTCTCCTCCTTGAGCAAGAGTCTTGGCGAATG

               501    -    551
UN51415        --> CGAACTCGGCGTCCACGGCTCTCTGCTTCTCCATGGCGGTTTCTTTGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535706       <-- CGAACTCGGCGTCCACGGCTCc............................  Raphanus raphanistrum subsp. maritimus
EW731771       <-- CGAACTCGGCGTCCACGGCTCTCTGCTTCTCCATGGCGGTTTCTTTGAGA  Raphanus sativus cv Rat-Tail Radish #3870
EY900021       <-- CGAACTCGGCGTCCACGGCTCTCTGCTTCTCCATGGCGGTTTCTTTGAGA  Raphanus raphanistrum subsp. maritimus
FD576384       <-- CGAACTCGGCGTCCACGGCTCTCTGCTTCTCCATGGCGGTTTCTTTGAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD564366       <-- CGAACTCAGCGTCCACGGCTCTCTGCTTCTCCATGGCGGTTTCTTTGAGA  Raphanus sativus var. oleiformis
FD572349       <-- ..................................................  Raphanus sativus cv Early Scarlet Globe
FD580883       --> CGAACTCGGCGTCCACGGCTCTCTGCTTCTCCATGGCGGTTTCTTTGAGA  Raphanus sativus cv Rat-Tail Radish #3870
EY895671       --> CGAACTCGGCGTCCACGGCTCTCTGCTTCTCCATGGCGGTTTCTTTGAGA  Raphanus raphanistrum subsp. maritimus
FY445380       --> CGAACTCAGCGTCCACGGCTCTCTGCTTCTCCATGGCGGTTTCTTTGAGA  Raphanus sativus cv GSK3-1
FD576008       --> CGAACTCAGCGTCCACGGCCCTCTGCTTCTCCATGGCGGTTTCTTTGAGA  Raphanus sativus cv Early Scarlet Globe
EW736411       --> CGAACTCGGCGTCCACGGCTCTCTGCTTCTCCATGGCGGTTTCTTTGAGA  Raphanus sativus cv Rat-Tail Radish #3870
FD567867       --> CGAACTCAGCGTCCACGGCTCTCTGCTTCTCCATGGCGGTTTCTTTGAGA  Raphanus sativus var. oleiformis

               551    -    601
UN51415        --> AGCTTGGCGCGTGTCTGAGCAATGTGAACTCTCTGTGAAGCCTCGAGTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535706       <-- ..................................................
EW731771       <-- AGCTTGGCGCGTGTCTGAGCAATGTGAACTCTCTGTGAAGCCTCGAGTCC
EY900021       <-- AGCTTGGCGCGTGTTGTAGCAATGTGAACTCTCTGTGAAGCCTCGAGCCC
FD576384       <-- AGCTTGGCGCGTGTCTGAGCAATGTGAACTCTCTGTGAAGCCTCGAGTCC
FD564366       <-- AGCTTGGCGCGTGTCTGAGCAATGTGAACTCTCTGTGAAGCCTCGAGTCC
FD572349       <-- ..................................................
FD580883       --> AGCTTGGCGCGTGTCTGAGCAATGTGAACTCTCTGTGAAGCCTCGAG...
EY895671       --> AGCTTGGCGCGTGTTGTAGCAATGTGAACTCTCTGTGAAGCCTCGAGCCC
FY445380       --> AGCTTGGCGCGTGTTGTAGCAATGTGAACTCTCTGTGAAGCCTCGAGTCC
FD576008       --> AGCTTGGCGCGTGTCTGAGCAATGTGAACTCTCTGTGAAGCCTCGAGTCC
EW736411       --> AGCTTGGCGCGTGTCTGAGCAATGTGAACTCTCTGTGAAGCCTCGAGTCC
FD567867       --> AGCTTGGCGCGTGTCTGAGCAATGTGAACTCTCTGTGAAGCCTCGAGTCC

               601    -    651
UN51415        --> TTCTTTAATGACGGTTTTGTATTTGGCTAACAAAGAGATGTAACCTATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535706       <-- ..................................................
EW731771       <-- TTCTTTAATGACGGTTTTGTATTTGGCTAACAAAGAGATGTAACCTATTG
EY900021       <-- TTCTTTAATGACGGTTTTGTATTTGGCTAACAAAGAGATGTAACCTATTG
FD576384       <-- TTCTTTAATGACGGTTTTGTATTTGGCTAACAAAGAGATGTAACCTATTG
FD564366       <-- TTCTTTAATGACGGTTTTGTATTTGGCTAACAAAGAGATGTAACCTATTG
FD572349       <-- ................................................TG
FD580883       --> ..................................................
EY895671       --> TTCTTTAATGACGGTTTTGTATTTGGCTAACAAAGAGATGTAACCTATTG
FY445380       --> TTCTTTAATGACGGTTTTGTATTTGGCTAACAAAGAGATGTAACCTATTG
FD576008       --> TTCTTTAATGACGGTTTTGTATTTGGCTAACAAAGAGATGTAACCTATTG
EW736411       --> TTCTTTAATGACGGTTTTGTATTTGGCTAACAAAGAGATGTAACCTATTG
FD567867       --> TTCTTTAATGACGGTTTTGTATTTGGCTAACAAAGAGATGTAACCTATTG

               651    -    701
UN51415        --> AAGCTGAGCTGAGTACCTCGTAACGTGTACCGGCTTCGATAATCTCGTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535706       <-- ..................................................
EW731771       <-- AAGCTGAGCTGAGTACCTCGTAACGTGTACCGGCTTCTATAATCTCGTCG
EY900021       <-- AAGCTGAGCTGAGTACCTCGTAACGTGTACCGGCTTCGATAATCTCGTCG
FD576384       <-- AAGCTGAGCTGAGTACCTCGTAACGTGTACCGGCTTCTATAATCTCGTCG
FD564366       <-- AGGCTGAGCTGAGTACCTCGTAACGTGTACCGGCTTCGATAATCTCGTCG
FD572349       <-- AAGCTGAGCTGAGTACCTCGTAACGTGTACCGGCTTCGATAATCTCGTCG
FD580883       --> ..................................................
EY895671       --> A.................................................
FY445380       --> AAGCTGAGCTGAGTACCTCGTAACGTGTACCGGCTTCGATAATCTCGTCG
FD576008       --> AAGCTGAGCTGAGTACCTCGTAACGTGTACCGGCTTCGATAATCTCGTCG
EW736411       --> AAGCTGAGCTGAGTACCTCGTAACGTGTACCGGCTTCTATAATCTCGTCG
FD567867       --> AGGCTGAGCTGAGTACCTCGTAACGTGTACCGGCTTCGATAATCTCGTCG

               701    -    751
UN51415        --> AAGTTGGGATGGTTTACAAGGTCACGTGCGGTTAGACCGCGTAGCTTCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535706       <-- ..................................................
EW731771       <-- AAGTTGGGATGGTTTACAAGGTCACGTGCGGTTAGACCGCGTAGCTTCTT
EY900021       <-- AAGTTGGGATGGTTTACAAGGTCACGTGCGGTTAGACCGCGTAGCTTCTT
FD576384       <-- AAGTTGGGATGGTTTACAAGGTCACGTGCGGTTAGACCGCGTAGCTTCTT
FD564366       <-- AAGTTGGGATGGTTTACAAGGTCACGTGCGGTTAGACCGCGTAGCTTCTT
FD572349       <-- AAGTTGGGATGGTTTACAAGGTCACGTGCGGTTAGACCGCGTAGCTTCTT
FD580883       --> ..................................................
EY895671       --> ..................................................
FY445380       --> AAGTTGGGATGGTTTACAAGGTCACGTGCGGTTAGACCGCGTAGCTTCTT
FD576008       --> AAGTTGGGATGGTTTACAAGGTCACGTGCGGTTAGACCGCGTAGCTTCTT
EW736411       --> AAGTTGG...........................................
FD567867       --> AAGTTGGGATGGTTTACAAGGTCACGTGCGGTTAGACCGCGTAGCTTCTT

               751    -    801
UN51415        --> TAGGGTTAGCTTTAAGCTCTCTATGTTCTCGGATGTAGACGAGACAATGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535706       <-- ..................................................
EW731771       <-- TAGGGTTAGCTTTAAGCTCTCTATGTTCTCGGATGTAGACGAGACAATGT
EY900021       <-- TAGGGTTAGCTTTAAGCTCTCTATGTTCTCGGATGTAGACGAGACAATGT
FD576384       <-- TAGGGTTGGCTTTAAGCTCTCTATGTTCTCGGATGTAGACGAGACAATGT
FD564366       <-- TAGGGTTAGCTTTAAGCTCTCTATGTTCTCGGATGTAGACGAGACAATGT
FD572349       <-- TAGGGTTAGCTTTAAGCTCTCTATGTTCTCGGATGTAGACGAGACAATGT
FD580883       --> ..................................................
EY895671       --> ..................................................
FY445380       --> TAGGGTTAGCTTTAAGCTCTCTATGTTCTCGGATGTAGACGAGACAATGT
FD576008       --> TAGGGTTAGCTTTAAGCTCTCTATGTTCTCGGATGTAGACGAGACAATGT
EW736411       --> ..................................................
FD567867       --> TAGGGTTAGCTT......................................

               801    -    851
UN51415        --> CTGTGCGTCCCTTTGAGGTTGTTTCTTGTCTATGGGTGTGAACGAGATTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535706       <-- ..................................................
EW731771       <-- CTGTGCGTCCCTTTGAGGTTGTTTCTTGTCTATGGGTGTGAACGAGATTG
EY900021       <-- CTGTGCGTCCCTTTGAGGTTGTTTCTTGTCTATGGGTGTGAACGAGATTG
FD576384       <-- CTGTGCGTCCCTTTGAGGTTGTTTCTTGTCTATGGGTGTGAACGAGATTG
FD564366       <-- CTGTGCGTCCCTTTGAGGTTGTTTCTTGTCTATGGGTGTGAACGAGATTG
FD572349       <-- CTGTGCGTCCCTTTGAGGTTGTTTCTTGTCTATGGGTGTGAACGAGATTG
FD580883       --> ..................................................
EY895671       --> ..................................................
FY445380       --> CTTTGCGTCCCTTTGAGGTTGTTTCTTGTCTATGGGTGTGAACAAGATTG
FD576008       --> CTGTGCGTCC-TTTGAG-TTGTTTCTTGTCTATGGGTGTGAACGAGATTG
EW736411       --> ..................................................
FD567867       --> ..................................................

               851    -    901
UN51415        --> TTCAGTGAAGTGGTGAGGCTAGAGGTCTCTGAGCCCTGGAAGTTTGATTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535706       <-- ..................................................
EW731771       <-- TTCAGTGAAGTGGTGAGGCTAGAGGTCTCTGAGCCCTGGAAGTTTGATTC
EY900021       <-- TTCAGTGAAGTGGTGAGGCTAGAGGTCTCTGAGCCCTGGAAGTTTGATTC
FD576384       <-- TTCAGTGAAGTGGTGAGGCTAGAGGTCTCTGAGCCCTGGAAGTTTGATTC
FD564366       <-- TTCAGTGAAGTGGTGAGGCTAGAGGTCTCTGAGCCCTGGAAGTTTGATTC
FD572349       <-- TTCAGTGAAGTGGTGAGGCTAGAGGTCTCTGAGCCCTGGAAGTTTGATTC
FD580883       --> ..................................................
EY895671       --> ..................................................
FY445380       --> T.................................................
FD576008       --> TTCAGTGAAGTGGTGAGGCTAGAG-TCTCTGAGCCCTGGAAGTTTG....
EW736411       --> ..................................................
FD567867       --> ..................................................

               901    -    951
UN51415        --> TTCAGCAAGTATCTCTCCTATGTTAATTGAACAATCAGTGTCTACCTTAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535706       <-- ..................................................
EW731771       <-- TTCAGCGAGTATCTCCCCTATGTTAATTGAACAATCAGTGTCTACCTTAA
EY900021       <-- TTCAGCAAGTATATCTCCTATGTTAATc......................
FD576384       <-- TTCAGCGAGTATCTCCCCTATGTTAATTGAACAATCAGTGTCTACCTTAA
FD564366       <-- TTCAGCAAGTATCTCTCCTATGTTAATTGAACAATCAGTGTCTACCTTAA
FD572349       <-- TTCAGCAAGTATCTCTCCTATGTTAATTGAACGATCAGTGTCTACCTTAA
FD580883       --> ..................................................
EY895671       --> ..................................................
FY445380       --> ..................................................
FD576008       --> ..................................................
EW736411       --> ..................................................
FD567867       --> ..................................................

               951    -   1001
UN51415        --> TACCATCTTTGCCTTGGTTAAAACAACCACACACACCATCTGTAGACTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535706       <-- ..................................................
EW731771       <-- GACCATCTTTGCC.....................................
EY900021       <-- ..................................................
FD576384       <-- GACCATCTTc........................................
FD564366       <-- TACCATCTTTGCCTTGGTTAAAACAACCACACACACCATCTGTAGACTTT
FD572349       <-- TACCATCTTTGCCTTGGTTAAAACAACCACACACACAATCTGTAGACTTT
FD580883       --> ..................................................
EY895671       --> ..................................................
FY445380       --> ..................................................
FD576008       --> ..................................................
EW736411       --> ..................................................
FD567867       --> ..................................................

               1001   -   1051
UN51415        --> AGAAGACTGCTAAAACCAGAGTTGGATCCACCAGAAGTTTTCTGCACTTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535706       <-- ..................................................
EW731771       <-- ..................................................
EY900021       <-- ..................................................
FD576384       <-- ..................................................
FD564366       <-- AGAAGACTGCTAAAACCAGAGTTGGATCCACCAGAAGTTTTCTGCACTTT
FD572349       <-- AGAAGACTGCTAAAACCAGAGTTGGATCCACCAGAAGTTTTCTGCACTTT
FD580883       --> ..................................................
EY895671       --> ..................................................
FY445380       --> ..................................................
FD576008       --> ..................................................
EW736411       --> ..................................................
FD567867       --> ..................................................

               1051   -   1101
UN51415        --> ACTTATGGTTTGTGTATTCTTTGAAGCTGCTGCTTCATATTCGCGTTCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535706       <-- ..................................................
EW731771       <-- ..................................................
EY900021       <-- ..................................................
FD576384       <-- ..................................................
FD564366       <-- ACTTATGGTTTGTGTATTCTTTGAAGCTGCTGCTTCATATTCGCGTTCAA
FD572349       <-- ACTTATGGTTTGTGTATTCTTTGAAGCTGCTGCTTCATATTCGCGTTCAA
FD580883       --> ..................................................
EY895671       --> ..................................................
FY445380       --> ..................................................
FD576008       --> ..................................................
EW736411       --> ..................................................
FD567867       --> ..................................................

               1101   -   1151
UN51415        --> TTTCTTCCAACATGCTGCTTCTATGAGTTTCAGCTTCTTCTTTATAAGTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535706       <-- ..................................................
EW731771       <-- ..................................................
EY900021       <-- ..................................................
FD576384       <-- ..................................................
FD564366       <-- TTTCTTCCAACATGCTGCTTCTATGAGTTTCAGCTTCTTCTTTATAAGTC
FD572349       <-- TTTCTTCCAACATGCTGCTTCTATGAGTTTCAGCTTCTTCTTTATAAGTC
FD580883       --> ..................................................
EY895671       --> ..................................................
FY445380       --> ..................................................
FD576008       --> ..................................................
EW736411       --> ..................................................
FD567867       --> ..................................................

               1151   -   1201
UN51415        --> TTTTCTACATGGCCCTTAGTCGCAGCTTCAAACTCACGTTCAATAGCATC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535706       <-- ..................................................
EW731771       <-- ..................................................
EY900021       <-- ..................................................
FD576384       <-- ..................................................
FD564366       <-- TTTTCTACATGGCCCTTAGTCGCAGCTTCAAACTCACGTTCAATAGCATC
FD572349       <-- TTTTCTACATGGCCCTTAGTCGCAGCTTCAAACTCACGTTCAATAGCATC
FD580883       --> ..................................................
EY895671       --> ..................................................
FY445380       --> ..................................................
FD576008       --> ..................................................
EW736411       --> ..................................................
FD567867       --> ..................................................

               1201   -   1251
UN51415        --> AAGCATACTTTTCCTAGTTTCCAGGTGTTCATCATGATCTTTGCCTTCGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535706       <-- ..................................................
EW731771       <-- ..................................................
EY900021       <-- ..................................................
FD576384       <-- ..................................................
FD564366       <-- AAGCATACc.........................................
FD572349       <-- AAGCATACTTTTCCTAGTTTCCAGGTGTTCATCATGATCTTTGCCTTCGG
FD580883       --> ..................................................
EY895671       --> ..................................................
FY445380       --> ..................................................
FD576008       --> ..................................................
EW736411       --> ..................................................
FD567867       --> ..................................................

               1251   -   1301
UN51415        --> TTGAATCACTAGACTTTTGCTCTCCAAGACCTTTTGTAGCAGCTTCC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD535706       <-- ...............................................
EW731771       <-- ...............................................
EY900021       <-- ...............................................
FD576384       <-- ...............................................
FD564366       <-- ...............................................
FD572349       <-- TTGAATCACTAGACTTTTGCTCTCCAAGACCTTTTGTAGCAGCTTCC
FD580883       --> ...............................................
EY895671       --> ...............................................
FY445380       --> ...............................................
FD576008       --> ...............................................
EW736411       --> ...............................................
FD567867       --> ...............................................