1      -     51
UN51485        --> GGGATAGGGAGGGGAAAAGCAGAAAGAAACCCTAATTTCACACCAGCAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528821       <-- GGGATAGGAAGGGGAAAAGCAGAGAGAAACCCTAATTTCACACCAGCAGA
EV571677       <-- .......GGAGGGGAAAAGCAGAAAGAAACCCTAATTTCACACCAGCAGA
EV572143       <-- .......GGAGGGGAAAAGCAGAAAGAAACCCTAATTTCACACCAGCAGA
EX768709       <-- .....................................ggACACCAGCAGA
FD532307       --> GGGATAGGAAGGGGAAAAGCAGAGAGAAACCCTAATTTCACACCAGCAGA
EV566578       --> .......GGAGGGGAAAAGCAGAAAGAAACCCTAATTTCACACCAGCAGA
EV567150       --> .......GGAGGGGAAAAGCAGAAAGAAACCCTAATTTCACACCAGCAGA
EY923899       --> ..................GCAGAAAGAAACCCTAATTTCACACCAGCAGA
EX764874       --> .....................................ggACACCAGCAGA

               51     -    101
UN51485        --> AGAAGAAGAAGAAGATTCAGCAGCAACAAGAGATGATGAAGAACACGCAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528821       <-- AGAAGAAGAAGAAGATTCAGCAGCAACAAGAGATGATGAAGAACACGCAA
EV571677       <-- AGAAGAAGAAGAAGATTCAGCAACAACAAGAGATGATGAAGAACACGCAA
EV572143       <-- AGAAGAAGAAGAAGATTCAGCAACAACAAGAGATGATGAAGAACACGCAA
EX768709       <-- AGAAGAAGAAGAAGATTCAGCAGCAACAAGAGATGATGAAGAACACGCAA
FD532307       --> AGAAGAAGAAGAAGATTCAGCAGCAACAAGAGATGATGAAGAACACGCAA
EV566578       --> AGAAGAAGAAGAAGATTCAGCAACAACAAGAGATGATGAAGAACACGCAA
EV567150       --> AGAAGAAGAAGAAGATTCAGCAACAACAAGAGATGATGAAGAACACGCAA
EY923899       --> AGAAGAAGAAGAAGATTCAGCAGCAACAAGAGATGATGAAGAACACGCAA
EX764874       --> AGAAGAAGAAGAAGATTCAGCAGCAACAAGAGATGATGAAGAACACGCAA

               101    -    151
UN51485        --> ACGATTTTCGGCAAGTACTGGCGTAGAGGTTTTTCATCCATCGCTTCTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528821       <-- ACGATTTTCGGCAAGTACTGGCGTAGAGGTTTTTCATCCATCGCTTCTTC
EV571677       <-- ACGATTTTCGGCAAGTACTGGCGTAGAGGTTTTTCATCCATCGCTTCTTC
EV572143       <-- ACGATTTTCGGCAAGTACTGGCGTAGAGGTTTTTCATCCATCGCTTCTTC
EX768709       <-- ACGATTTTCGGCAAGTACTGGCGTAGAGGTTTTTCATCCGTCGCTTCTTC
FD532307       --> ACGATTTTCGGCAAGTACTGGCGTAGAGGTTTTTCATCCATCGCTTCTTC
EV566578       --> ACGATTTTCGGCAAGTACTGGCGTAGAGGTTTTTCATCCATCGCTTCTTC
EV567150       --> ACGATTTTCGGCAAGTACTGGCGTAGAGGTTTTTCATCCATCGCTTCTTC
EY923899       --> ACGATTTTCGGCAAGTACTGGCGTAGAGGTTTTTCATCCATCGCTTCTTC
EX764874       --> ACGATTTTCGGCAAGTACTGGCGTAGAGGTTTTTCATCCGTCGCTTCTTC

               151    -    201
UN51485        --> CCCTCTGACCTCGAGGGTCAAGCAGGAGTTGGCGGAGCAGAATGGCTTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528821       <-- CCCTCTGACCTCGAGGGTCAAGCAGGAGTTGGCGGAGCAGAATGGCTTGG
EV571677       <-- CCCTCTGACCTCGAGGGTCAAGCAGGAGTTGGCGGAGCAGAATGGCTTGG
EV572143       <-- CCCTCTGACCTCGAGGGTCAAGCAGGAGTTGGCGGAGCAGAATGGCTTGG
EX768709       <-- CCCTCTGACCTCGAGGGTCAAGCAGGAGTTGGCGGAGCAGAATGGCTTGG
FD532307       --> CCCTCTGACCTCGAGGGTCAAGCAGGAGTTGGCGGAGCAGAATGGCTTGG
EV566578       --> CCCTCTGACCTCGAGGGTCAAGCAGGAGTTGGCGGAGCAGAATGGCTTGG
EV567150       --> CCCTCTGACCTCGAGGGTCAAGCAGGAGTTGGCGGAGCAGAATGGCTTGG
EY923899       --> CCCTCTGACCTCGAGGGTCAAGCAGGAGTTGGCGGAGCAGAATGGCTTGG
EX764874       --> CCCTCTGACCTCGAGGGTCAAGCAGGAGTTGGCGGAGCAGAATGGCTTGG

               201    -    251
UN51485        --> GTCTCTTTGGAGCATTTATTGGTGGATGGTGTATCAAAGCTTCCATAAAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528821       <-- GTCTCTTTGGAGCATTTATTGGTGGATGGTGTATCAAAGCTTCCATAAAT
EV571677       <-- GTCTCTTTGGAGCATTTATTGGTGGATGGTGTATCAAAGCTTCCATAAAT
EV572143       <-- GTCTCTTTGGAGCATTTATTGGTGGATGGTGTATCAAAGCTTCCATAAAT
EX768709       <-- GTCTCTTTGGAGCATTTATTGGTGGATGGTGTATCAAAGCTTCCATAAAT
FD532307       --> GTCTCTTTGGAGCATTTATTGGTGGATGGTGTATCAAAGCTTCCATAAAT
EV566578       --> GTCTCTTTGGAGCATTTATTGGTGGATGGTGTATCAAAGCTTCCATAAAT
EV567150       --> GTCTCTTTGGAGCATTTATTGGTGGATGGTGTATCAAAGCTTCCATAAAT
EY923899       --> GTCTCTTTGGAGCATTTATTGGTGGATGGTGTATCAAAGCTTCCATAAAT
EX764874       --> GTCTCTTTGGAGCATTTATTGGTGGATGGTGTATCAAAGCTTCCATAAAT

               251    -    301
UN51485        --> GTTTACAAGAAAAGAGAGCATTGGTACAGAGTGGACAGATTGTCTAAAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528821       <-- GTTTACAAGAAAAGAGAGCATTGGTACAGAGTGGACAGATTGTCTAAAGA
EV571677       <-- GTT-ACAAGAAAAGAGAGCATTGGTACAGAGTGGACAGATTGTCTAAAGA
EV572143       <-- GTT-ACAAGAAAAGAGAGCATTGGTACAGAGTGGACAGATTGTCTAAAGA
EX768709       <-- GTTTACAAGAAAAGAGAGCATTGGTACAGAGTGGACAGATTGTCTAAAGA
FD532307       --> GTTTACAAGAAAAGAGAGCATTGGTACAGAGTGGACAGATTGTCTAAAGA
EV566578       --> GTT-ACAAGAAAAGAGAGCATTGGTACAGAGTGGACAGATTGTCTAAAGA
EV567150       --> GTT-ACAAGAAAAGAGAGCATTGGTACAGAGTGGACAGATTGTCTAAAGA
EY923899       --> GTTTACAAGAAAAGAGAGCATTGGTACAGAGTGGACAGATTGTCTAAAGA
EX764874       --> GTTTACAAGAAAAGAGAGCATTGGTACAGAGTGGACAGATTGTCTAAAGA

               301    -    351
UN51485        --> GAACGACGAGCGTTTTGTTGATCTGTTGACTAGATCTTCCCAGCTCACAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528821       <-- GAACGACGAGCGTTTTGTTGATCTGTTGACTAGATCTTCCCAGCTCACAA
EV571677       <-- GAACGATGAGCGTTTTGTTGATCTGTTGACTAGATCTTCCCAGCTCACAA
EV572143       <-- GAACGATGAGCGTTTTGTTGATCTGTTGACTAGATCTTCCCAGCTCACAA
EX768709       <-- GAACGACGAGCGTTTTGTTGATCTGTTGACTAGATCTTCCCAGCTCACAA
FD532307       --> GAACGACGAGCGTTTTGTTGATCTGTTGACTAGATCTTCCCAGCTCACAA
EV566578       --> GAACGATGAGCGTTTTGTTGATCTGTTGACTAGATCTTCCCAGCTCACAA
EV567150       --> GAACGATGAGCGTTTTGTTGATCTGTTGACTAGATCTTCCCAGCTCACAA
EY923899       --> GAACGACGAGCGTTTTGTTGATCTGTTGACTAGATCTTCCCAGCTCACAA
EX764874       --> GAACGACGAGCGTTTTGTTGATCTGTTGACTAGATCTTCCCAGCTCACAA

               351    -    401
UN51485        --> TGGCAAGGACTGAAGCCAGTCGCAAACGTTTGATGGATATGAAAGACACA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528821       <-- TGGCAAGGACTGAAGCCAGTCGCAAACGTTTGATGGATATGAAAGACACA
EV571677       <-- TGGCAAGGACTGAAGCCAGTCGCAAACGTTTGATGGATATGAAAGACACA
EV572143       <-- TGGCAAGGACTGAAGCCAGTCGCAAACGTTTGATGGATATGAAAGACACA
EX768709       <-- TGGCAAGGACTGAAGCCAGTCGCAAACGTTTGATGGATATGAAAGACACA
FD532307       --> TGGCAAGGACTGAAGCCAGTCGCAAACGTTTGATGGATATGAAAGACACA
EV566578       --> TGGCAAGGACTGAAGCCAGTCGCAAACGTTTGATGGATATGAAAGACACA
EV567150       --> TGGCAAGGACTGAAGCCAGTCGCAAACGTTTGATGGATATGAAAGACACA
EY923899       --> TGGCAAGGACTGAAGCCAGTCGCAAACGTTTGATGGATATGAAAGACACA
EX764874       --> TGGCAAGGACTGAAGCCAGTCGCAAACGTTTGATGGATATGAAAGACACA

               401    -    451
UN51485        --> GTCGATTCTGACTAGTCTCTTCCCCGATGTAATAATTATTATTGTGCCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528821       <-- GTCGATTCTGACTAGTCTCTTCCCCGATGTAATAATTATTATTGTGCCTT
EV571677       <-- GTCGATTCTGACTAGTCTCTTCCCCGATGTAATAATAATTATTGTGCCTT
EV572143       <-- GTCGATTCTGACTAGTCTCTTCCCCGATGTAATAATAATTATTGTGCCTT
EX768709       <-- GTCGATTCTGACTAGTCTCTTCCCCGATGTAATAATTATTATCGTGCCTT
FD532307       --> GTCGATTCTGACTAGTCTCTTCCCCGATGTAATAATTATTATTGTGCCTT
EV566578       --> GTCGATTCTGACTAGTCTCTTCCCCGATGTAATAATAATTATTGTGCCTT
EV567150       --> GTCGATTCTGACTAGTCTCTTCCCCGATGTAATAATAATTATTGTGCCTT
EY923899       --> GTCGATTCTGACTAGTCTCTTCCCCGATGTAATAATTATTATTGTTCCTT
EX764874       --> GTCGATTCTGACTAGTCTCTTCCCCGATGTAATAATTATTATCGTGCCTT

               451    -    501
UN51485        --> GTATCTGCACACTCTGGAACATGCTTTTGGAGTTTATTGGAGATAGTTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528821       <-- GTATCTGCACACTCTGGAACATGCTTTTGGAGTTGATTGGAGATAGTTTA  Raphanus raphanistrum subsp. maritimus
EV571677       <-- GTATCTGCACACTCTGGAACATGCTTTTGGAGTTTATTGGAGATAGTTTA  Raphanus raphanistrum subsp. landra
EV572143       <-- GTATCTGCACACTCTGGAACATGCTTTTGGAGTTTATTGGAGATAGTTTA  Raphanus raphanistrum subsp. landra
EX768709       <-- GTATCTGCACACTCTGGAACATGCTTTTGGAGTTGATTGGAGATAGTTTA  Raphanus raphanistrum subsp. raphanistrum (NY)
FD532307       --> GTATCTGCACACTCTGGAACATGCTTTTGGAGTTGATTGGAGATAGTTTA  Raphanus raphanistrum subsp. maritimus
EV566578       --> GTATCTGCACACTCTGGAACATGCTTTTGGAGTTTATTGGAGATAGTTTA  Raphanus raphanistrum subsp. landra
EV567150       --> GTATCTGCACACTCTGGAACATGCTTTTGGAGTTTATTGGAGATAGTTTA  Raphanus raphanistrum subsp. landra
EY923899       --> GTATCTGCACACTCTGGAACATGCTTTTGGAGTTTATTGGAGATAGTTTA  Raphanus raphanistrum subsp. landra
EX764874       --> GTATCTGCACACTCTGGAACATGCTTTTGGAGTTGATTGGAGATAGTTTA  Raphanus raphanistrum subsp. raphanistrum (NY)

               501    -    551
UN51485        --> TCTTGTGCTTTGTTGTTGGTATTTGTAACTAATCTGTGTCAAATGATCTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528821       <-- TCTTGTGCTTTGTTGTTGGTATTTGTAACTAATCTGTGTCAAATGATCTT
EV571677       <-- TCTTGTGCTTTGTTGTTGGTATTTGTAACTAATCTGTGTCAAATGATCTT
EV572143       <-- TCTTGTGCTTTGTTGTTGGTATTTGTAACTAATCTGTGTCAAATGATCTT
EX768709       <-- TCTTGTGCTTTGTTGTTGGTATTTGTAACTAATCTGTGTCAAATGATCTT
FD532307       --> TCTTGTGCTTTGTTGTTGGTATTTGTAACTAATCTGTGTCAAATGATCTT
EV566578       --> TCTTGTGCTTTGTTGTTGGTATTTGTAACTAATCTGTGTCAAATGATCTT
EV567150       --> TCTTGTGCTTTGTTGTTGGTATTTGTAACTAATCTGTGTCAAATGATCTT
EY923899       --> TTTTGTGCTTTGTTGTTGGTATTTGTAACTAATCTGTGTCAAATGATCTT
EX764874       --> TCTTGTGCTTTGTTGTTGGTATTTGTAACTAATCTGTGTCAAATGATCTT

               551    -    601
UN51485        --> AGAACAACAACTAGTTCTGACAATAGCATCTATTATTAAGTCTTTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
FD528821       <-- AGAACAACAACTAGTTCTGATAATAGCATCTATTATTAAGTCTTTG
EV571677       <-- AGAACAACAACTAGTTCTGAC.........................
EV572143       <-- AGAACAACAACTAGTTCTGAC.........................
EX768709       <-- AGAACAgc......................................
FD532307       --> AGAACAACAACTAGTTCTGATAATAGCATCTATTATTAAGTCTTTG
EV566578       --> AGAACAACAACTAGTTCTGAC.........................
EV567150       --> AGAACAACAACTAGTTCTGAC.........................
EY923899       --> AGAACAACAACTAGTTCTGATAATAGCATCTATTATTAAGTC....
EX764874       --> AGAACAgc......................................