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Alignment for radish unigene UN51573

               1      -     51
UN51573        --> GGAGAAAACACAAATACGCAGAGAAAGGAAGGAGCCCCTGAGGGAGAGAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547289       <-- ..................................................
EV544094       <-- ..................................................
EV545028       <-- ..................................................
FD975331       <-- ..................................................
EV548419       --> GGAGAAAACACAAATACGCAGAGAAAGGAAGGAGCCCCTGAGGGAGAGAA
EY914978       --> ..................................................
EY898340       --> ..................................................
EV549584       --> ..................................................
EX894186       --> ..................................................
EY900047       --> ..................................................
EY941308       --> ..................................................
FD535955       --> ..................................................
FD979214       --> ..................................................
FD979250       --> ..................................................

               51     -    101
UN51573        --> GTGAGAAGTAACGCAAAGATTCAAAAGAGAACCAGACTTCTCTCACTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547289       <-- ..................................................
EV544094       <-- ..................................................
EV545028       <-- ..................................................
FD975331       <-- ..................................................
EV548419       --> GTGAGAAGTAACGCAAAGATTCAAAAGAGAACCAGACTTCTCTCACTGTT
EY914978       --> ..................................................
EY898340       --> ..................................................
EV549584       --> ..................................................
EX894186       --> ..................................................
EY900047       --> ..................................................
EY941308       --> ..................................................
FD535955       --> ..................................................
FD979214       --> ..................................................
FD979250       --> ..................................................

               101    -    151
UN51573        --> TCATCTTCTCAAATCACCTTTTAGCTCCCGATTCGTTTCTCACTCTTCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547289       <-- ..................................................
EV544094       <-- ..................................................
EV545028       <-- ..................................................
FD975331       <-- ..................................................
EV548419       --> TCATCTTCTCAAATCACCTTTTAGCTCCCGACTCGTTTCTCACTCTTCTT
EY914978       --> ggATCTTCTCAAATCACCTTTTAGCTCCCGATTCGTTTCTCACTCTTCTT
EY898340       --> ....................ggAGCTCCCGATTCGTTTCTCACTCTTCTT
EV549584       --> .................................................G
EX894186       --> .................................................G
EY900047       --> .................................................G
EY941308       --> .................................................G
FD535955       --> .................................................G
FD979214       --> ..................................................
FD979250       --> ..................................................

               151    -    201
UN51573        --> GGCCGTTAACCACAAGTAAACAGAGGCTGGAGCTGGGGAAGAAAAGGATT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547289       <-- ..................................................
EV544094       <-- ..................................................
EV545028       <-- ..................................................
FD975331       <-- ..................................................
EV548419       --> TGCCGTTAACCACAAGTTAACAGAGGCTGGAGCTGGGGAAGAAACGGATT
EY914978       --> TGCCGTTAACCACAAGTAAACAGAGGCTGGAGCTGGGGAAGAAAAGGATT
EY898340       --> TGCCGTTAACCACAAGTAAACAGAGGCTGGAGCTGGGGAAGAAAAGGATT
EV549584       --> GGCCGTTAACCACAAGTAAACAGAGGCAGGAGCTGGGGAAGAAAAGGATT
EX894186       --> GGCCGTTAACCACAAGTAAACAGAGGCTGGAGCTGGGGAAGAAAAGGATT
EY900047       --> GGCCGTTAACCACAAGTAAACAGAGTCTGGAGCTGGGGAAGAAAAGGATT
EY941308       --> GGCCGTTAACCACAAGTAAACAGAGGCTGGAGCTGGGGAAGAAAAGGATT
FD535955       --> GGCCGTTAACCACAAGTAAACAGAGGCTGGAGCTGGGGAAGAAAAGGATT
FD979214       --> GGCCGTTAACCACAAGTAAACAGAGGCTGGAGCTGGGGAAGAAAAGGATT
FD979250       --> GGCCGTTAACCACAAGTAAACAGAGGCTGGAGCTGGGGAAGAAAAGGATT

               201    -    251
UN51573        --> GTCTATGGAGGGAGACGGCGTAAAAGGTTTGGGATGCCAGAAGACTATGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547289       <-- ..................................................
EV544094       <-- ..................................................
EV545028       <-- ..................................................
FD975331       <-- ..................................................
EV548419       --> GTCTATGGAGGGAGACGGCGTAAAAGGTTTGGGATGCCAGAAGACTATGG
EY914978       --> GTCTATGGAGGGAGACGGCGTAAAAGGTTTGGGATGCCCGAAGACTATGG
EY898340       --> GTCTATGGAGGGAGACGGCGTAAAAGGTTTGGGATGCCAGAAGACTATGG
EV549584       --> GTCTATGGAGGGAGACGGCGTAAAAGGTTTGGGATGCCAGAAGACTATGG
EX894186       --> GTATATGGAGGGAGACGACGTAAAAGGTTTGGGATGCCAGAAGACTATGG
EY900047       --> GTCTATGGAGGGAGACGGCGTAAAAGGTTTGGGATGCCAGAAGACTATGG
EY941308       --> GTATATGGAGGGAGACGGCGTAAAAGGTTTGGGATGCCAGAAGACTATGG
FD535955       --> GTCTATGGAGGGAGACGGCGTAAAAGGTTTGGGATGCCAGAAGACTATGG
FD979214       --> GTCTATGGAGGGAGACGGCGTAAAAGGTTTGGGATGCCAGAAGACTATGG
FD979250       --> GTCTATGGAGGGAGACGGCGTAAAAGGTTTGGGATGCCAGAAGACTATGG

               251    -    301
UN51573        --> ATGGGAAGGCGAGTAACGGGAACAAGGCTGTACCTTCTTGTTGCCTCAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547289       <-- ..................................................
EV544094       <-- ..................................................
EV545028       <-- ..................................................
FD975331       <-- ..................................................
EV548419       --> ATGGGAAGGCGAGTAACGGGAACAAGGCTGTACCTTCTTGTTGCCTCAAG
EY914978       --> ATGGGAAGGCGAGTAACGGGAACAAGGCTGTACCTTCTTGTTTCCTCAAG
EY898340       --> ATGGGAAGGCGAGTAACGGGAACAAGGCTGTACCCTCTTGTTGCCTCAAG
EV549584       --> ATGGGAAGGCGAGTAACGGGAACAAGGCTGTACCTTCTTGTTGCCTCAAG
EX894186       --> ATGGGAAGGCGAGTAACGGGAACAAGGCTGTACCTTCTTGTTGCCTCAAG
EY900047       --> ATGGGAAGGCGAGTAACTGGAACAAGGCTGTACCTTCTTGTTGCCTCAAG
EY941308       --> ATGGGAAGGCGAGTAACGGGAACAAGGCTGTACCTTCTTGTTGCCTCAAG
FD535955       --> ATGGGAAGGCGAGTAACGGGAACAAGGCTGTACCTTCTTGTTGCCTCAAG
FD979214       --> ATGGGAAGGCGAGTAACGGGAACAAGGCTGTACCTTCTTGTTGCCTCAAG
FD979250       --> ATGGGAAGGCGAGTAACGGGAACAAGGCTGTACCTTCTTGTTGCCTCAAG

               301    -    351
UN51573        --> GCCATGGCTTGCTTACCTGAGGAAGATGCTAAGTGCCACTCCACTGTTGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547289       <-- ..................................................
EV544094       <-- ..................................................
EV545028       <-- ..................................................
FD975331       <-- ..................................................
EV548419       --> GCCATGGCTTGCTTACCTGAGGAAGATGCTAAGTGCCACTCCACTGTTGT
EY914978       --> GCCATGGCTTGCTTACCTGAGGAAGATGCTAAGTGCCACTCCACTGTTGT
EY898340       --> GCCATGGCTTGCTTACCTGAGGAAGATGCTAAGTGCCACTCCACTGTTGT
EV549584       --> GCCATGGCTTGCTTACCTGAGGAAGATGCTAAGTGCCACTCCACTGTTGT
EX894186       --> GCCATGGCTTGCTTACCTGAGGAAGATGCTAAGTGCCACTCCACTGTTGT
EY900047       --> GCCATGGCTTGCTTACCTGAGGAAGATGCTAAGTGCCACTCCACTGTTGT
EY941308       --> GCCATGGCTTGCTTACCTGAGGAAGATGCTAAGTGCCACTCCACTGTTGT
FD535955       --> GCCATGGCTTGCTTACCTGAGGAAGATGCTAAGTGCCACTCCACTGTTGT
FD979214       --> GCCATGGCTTGCTTACCTGAGGAAGATGCTAAGTGCCACTCCACTGTTGT
FD979250       --> GCCATGGCTTGCTTACCTGAGGAAGATGCTAAGTGCCACTCCACTGTTGT

               351    -    401
UN51573        --> TTCTGGATGGTTCTCCGAACCTCACTCTCGCTCTGGGAAAAAAGGGGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547289       <-- ..................................................
EV544094       <-- ..................................................
EV545028       <-- ..................................................
FD975331       <-- ..................................................
EV548419       --> TTCTGGATGGTTCTCCGAACCTCATTCTCGCTCTGGGAAAAAAGGGGAAG
EY914978       --> TTCTGGATGGTTCTCCGAACCTCACTCTCGCTCTGGGAAAAAAGGGGAAG
EY898340       --> TTCTGGATGGTTCTCCGAACCTCACTCTCGCTCTGGGAAAAAAGGGGAAG
EV549584       --> TTCTGGATGGTTCTCCGAACCTCACTCTCGCTCTGGGAAAAAAGGGGAAG
EX894186       --> TTCTGGATGGTTCTCCGAACCTCACTCTCGCTCTGGAAAAAAAGGCGAAG
EY900047       --> TTCTGGATGGTTCTCCGAACCTCACTCTCGCTCTGGGAAAAAAGGGGAAG
EY941308       --> TTCTGGATGGTTCTCCGAACCTCACTCTCGCTCTGGAAAAAAAGGCGAAG
FD535955       --> TTCTGGATGGTTCTCCGAACCTCACTCTCGCTCTGGGAAAAAAGGGGAAG
FD979214       --> TTCTGGATGGTTCTCCGAACCTCACTCTCGCTCTGGGAAAAAAGGGGAAG
FD979250       --> TTCTGGATGGTTCTCCGAACCTCACTCTCGCTCTGGGAAAAAAGGGGAAG

               401    -    451
UN51573        --> CTGTCTATTTCAATAACCCTATGTGGCCTGGTGAAGCACACTCACTGAAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547289       <-- ..................................................
EV544094       <-- ..................................................
EV545028       <-- ..................................................
FD975331       <-- ..................................................
EV548419       --> CTGTCTATTTCAATAACCCTATGTGGCCTGGTGAAGCACACTCACTGAAA
EY914978       --> CTGTCTATTTCAATAACCCTATGTGGCCTGGTGAAGCACATTCACTGAAA
EY898340       --> CTGTCTATTTCAATAACCCTATGTGGCCTGGTGAAGCACACTCACTAAAA
EV549584       --> CTGTCTATTTCAATAACCCTATGTGGCCTGGTGAAGCACACTCACTGAAA
EX894186       --> CTGTCTATTTCAATAACCCTATGTGGCCTGGTGAAGCACACTCACTAAAA
EY900047       --> CTGTCTATTTCAATAACCCTATGTGGCCTGGTGAAGCACACTCACTGAAA
EY941308       --> CTGTCTATTTCAATAACCCTATGTGGCCTGGTGAAGCACACTCACTAAAA
FD535955       --> CTGTCTATTTCAATAACCCTATGTGGCCTGGTGAAGCACACTCACTGAAA
FD979214       --> CTGTCTATTTCAATAACCCTATGTGGCCTGGTGAAGCACACTCACTGAAA
FD979250       --> CTGTCTATTTCAATAACCCTATGTGGCCTGGTGAAGCACACTCACTGAAA

               451    -    501
UN51573        --> GTTGAGAAAGTTCTGTTTAAGGACAAGTCAGAGTATCAGGAAGTCCTAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547289       <-- ..................................................
EV544094       <-- ..................................................
EV545028       <-- ..................................................
FD975331       <-- ..................................................
EV548419       --> GTTGAGAAAGTTCTGTTTAAGGACAAGTCAGAGTATCAGGAAGTCCTAGT
EY914978       --> GTTGAGAAAGTTCTGTTTAAGGACAAGTCAGAGTATCAGGAAGTCCTAGT
EY898340       --> GTTGAGAAAGTTCTGTTTAAGGACAAGTCAGAGTATCAGGAAGTCCTAGT
EV549584       --> GTTGAGAAAGTTCTGTTTAAGGACAAGTCAGAGTATCAGGAAGTCCTAGT
EX894186       --> GTTGAGAAAGTTCTGTTTAAGGACAAGTCAGAGTATCAGGAAGTCTTAGT
EY900047       --> GTTGAGAAAGTTCTGTTTAAGGACAAGTCAGAGTATCAGGAAGTCCTAGT
EY941308       --> GTTGAGAAAGTTCTGTTTAAGGACAAGTCAGAGTATCAGGAAGTCTTAGT
FD535955       --> GTTGAGAAAGTTCTGTTTAAGGACAAGTCAGAGTATCAGGAAGTCCTAGT
FD979214       --> GTTGAGAAAGTTCTGTTTAAGGACAAGTCAGAGTATCAGGAAGTCCTAGT
FD979250       --> GTTGAGAAAGTTCTGTTTAAGGACAAGTCAGAGTATCAGGAAGTCCTAGT

               501    -    551
UN51573        --> GTTTGAGTCAGCTACCTACGGGAAAGTGCTTGTTCTAGATGGTATTGTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547289       <-- ..................................................
EV544094       <-- ..................................................
EV545028       <-- ..................................................
FD975331       <-- ..................................................
EV548419       --> GTTTGAGTCAGCTACCTACGGGAAAGTGCTTGTTCTAGATGGTATTGTAC
EY914978       --> GTTTGAGTCAGCTACCTACGGGAAAGTGCTTGTTCTAGATGGTATTGTAC
EY898340       --> GTTTGAGTCAGCTACCTACGGGAAAGTGCTTGTTCTAGATGGTATTGTAC
EV549584       --> GTTTGAGTCAGCTACCTACGGGAAAGTGCTTGTTCTAGATGGTATTGTAC
EX894186       --> GTTTGAGTCAGCTACCTACGGGAAAGTGCTTGTTCTAGATGGTATTGTAC
EY900047       --> GTTTGAGTCAGCTACCTACGGGAAAGTGCTTGTTCTAGATGGTATTGTAC
EY941308       --> GTTTGAGTCAGCTACCTACGGGAAAGTGCTTGTTCTAGATGGTATTGTAC
FD535955       --> GTTTGAGTCAGCTACCTACGGGAAAGTGCTTGTTCTAGATGGTATTGTAC
FD979214       --> GTTTGAGTCAGCTACCTACGGGAAAGTGCTTGTTCTAGATGGTATTGTAC
FD979250       --> GTTTGAGTCAGCTACCTACGGGAAAGTGCTTGTTCTAGATGGTATTGTAC

               551    -    601
UN51573        --> AGCTGACTGAAAAAGACGAATTCGCATATCAGGAGATGATAGCACATCTG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547289       <-- ..................................................
EV544094       <-- ..................................................
EV545028       <-- ..................................................
FD975331       <-- ..................................................
EV548419       --> AGCTGACTGAAAAAGACGAATTCGCATATCAGGAGATGATAGCACATCTG
EY914978       --> AGCTGACTGAAAAAGACGAATTCGCATATCAGGAGATGATAGCACATCTG
EY898340       --> AGCTGACTGAAAAAGACGAATTCGCATATCAAGAGATGATAGCACATCTG
EV549584       --> AGCTGACTGAAAAAGACGAATTCGCATATCAGGAGATGATAGCACATCTG
EX894186       --> AGCTGACTGAAAAAGACGAATTCGCATATCAGGAGATGATAGCACATCTG
EY900047       --> AGCTGACTGAAAAAGACGAATTCGCATATCAGGAGATGGTAGCACATCTG
EY941308       --> AGCTGACTGAAAAAGACGAATTCGCATATCAGGAGATGATAGCACATCTG
FD535955       --> AGCTGACTGAAAAAGACGAATTCGCATATCAGGAGATGATAGCACATCTG
FD979214       --> AGCTGACTGAAAAAGACGAATTCGCATATCAGGAGATGATAGCACATCTG
FD979250       --> AGCTGACTGAAAAAGACGAATTCGCATATCAGGAGATGATAGCACATCTG

               601    -    651
UN51573        --> CCTCTTTGCTCTACACCTTCTCCTAAAAATGTTCTAGTTGTTGGGGGAGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547289       <-- ......................CTAAAAATGTTCTAGTTGTTGGGGGAGG
EV544094       <-- ..........................AAATGTTCTAGTTGTTGGGG-AGG
EV545028       <-- ..........................AAATGTTCTAGTTGTTGGGGGAGG
FD975331       <-- ..................................................
EV548419       --> CCTCTTTGCTCTACACCTTCTCCTAAAAATGTTCTAGTTGTTGGGGGAGG
EY914978       --> CCTCTTTGCTCTACACCTTCTCCTAAAAATGTTCTAGTTGTTGGGGGAGG
EY898340       --> CCTCTTTGCTCTACACCTTCTCCTAAAAATGTTCTAGTTGTTGGGGGAGG
EV549584       --> CCTCTTTGCTCTACACCTTCTCCTAAAAATGTTCTAGTTGTTGGGGGAGG
EX894186       --> CCTCTTTGCTCTACACCTTCTCCTAAAAATGTTCTAGTTGTTGGGGGAGG
EY900047       --> CCTCTTTGCTCTACACCTTCTCCTAAAAATGTTCTAGTTGTTGGGGGAGG
EY941308       --> CCTCTTTGCTCTACACCTTCTCCTAAAAATGTTCTAGTTGTTGGGGGAGG
FD535955       --> CCTCTTTGCTCTACACCTTCTCCTAAAAATGTTCTAGTTGTTGGGGGAGG
FD979214       --> CCTCTTTGCTCTACACCTTCTCCTAAAAATGTTCTAGTTGTTGGGGGAGG
FD979250       --> CCTCTTTGCTCTACACCTTCTCCTAAAAATGTTCTAGTTGTTGGGGGAGG

               651    -    701
UN51573        --> TGACGGTGGTGTTCTCAGGGAGATTTCTCGCCATAGCTCTGTTGAGGTTA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547289       <-- TGACGGTGGTGTTCTCAGGGAGATTTCTCGCCATAGCTCTGTTGAGGTTA
EV544094       <-- TGACGGTGGTGTTCTCAGGGAGATTTCTCGCCATAGCTCTGTTGAGGTTA
EV545028       <-- TGACGGTGGTGTTCTCAGGGAGATTTCTCGCCATAGTTCTGTTGAGGTTA
FD975331       <-- ..................................................
EV548419       --> TGACGGTGGTGTTCTCAGGGAGATTTCTCGCCATAGCTCTGTTGAGGTTA
EY914978       --> TGACGGTGGTGTTCTCAGGGAGATTTCTCGCCATAGCTCTGTTGAGGTTA
EY898340       --> TGACGGTGGTGTTCTCAGGGAGATTTCTCGCCATAGCTCTGTTGAGGTTA
EV549584       --> TGACGGTGGTGTTCTCAGGGAGATTTCTCGCCATAGTTCTGTTGAGGTTA
EX894186       --> TGACGGTGGTGTTCTCAGGGAGATTTCTCGCCATAGCTCTGTTGAGGTTA
EY900047       --> TGACGGTGGTGTTCTCAGGGAGATCTCTCGCCATAGCTCTTTTGAGGTTA
EY941308       --> TGACGGTGGTGTTCTCAGGGAGATTTCTCGCCATAGCTCTGTTGAGGTTA
FD535955       --> TGACGGTGGTGTTCTCAGGGAGATTTCTCGCCATAGCTCTGTTGAGGTTA
FD979214       --> TGACGGTGGTGTTCTCAGGGAGATTTCTCGCCATAGCTCTGTTGAGGTTA
FD979250       --> TGACGGAGGTGTTCTCAGGGAGATTTCTCGCCATAGCTCTGTTGAGGTTA

               701    -    751
UN51573        --> TTGACATTTGCGAGATAGACAAGATGGTTATAGATGTGTCTAAGAAGTTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547289       <-- TTGACATTTGCGAGATAGACAAGATGGTTATAGATGTGTCTAAGAAGTTC
EV544094       <-- TTGACATTTGCGAGATAGACAAGATGGTTATAGATGTGTCTAAGAAGTTC
EV545028       <-- TTGACATTTGCGAGATAGACAAGATGGTTATAGATGTGTCTAAGAAGTTC
FD975331       <-- ..................................................
EV548419       --> TTGACATTTGCGAGATAGACAAGATGGTTATAGATGTGTCTAAGAAGTTC
EY914978       --> TTGACATTTGCGAGATAGACAAGATGGTTATAGATGTGTCTAAGAAGTTC
EY898340       --> TTGACATTTGCGAGATAGACAAGATGGTTATAGATGTGTCTAAGAAGTTC
EV549584       --> TTGACATTTGCGAGATAGACAAGATGGTTATAGATGTGTCTAAGAAGTTC
EX894186       --> TTGACATTTGCGAGATAGACAAGATGGTTATAGATGTGTCTAAGAAGTTC
EY900047       --> TTGACATTTGCGAGATAGACAAGATGGTTATAGATGTGTCTAAGAAGTTC
EY941308       --> TTGACATTTGCGAGATAGGCAAGATGGTTATAGATGTGTCTAAGAAGTTC
FD535955       --> TTGACATTTGCGAGATAGACAAGATGGTTATAGATGTGTCTAAGAAGTTC
FD979214       --> TTGACATTTGCGAGATAGACAAGATGGTTATAGATGTGTCTAAGAAGTTC
FD979250       --> TTGACATTTGCGAGATAGACAAGATGGTTATAGATGTGTCTAAGAAGTTC

               751    -    801
UN51573        --> TTCCCCGAGTTAGCTGTTGGATTTGAAGACCCTCGTGTTCAACTTCACAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547289       <-- TTCCCCGAGTTAGCTGTTGGATTTGAAGACCCTCGTGTTCAACTTCACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV544094       <-- TTCCCCGAGTTAGCTGTTGGATTTGAAGACCCTCGTGTTCAACTTCACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EV545028       <-- TTCCCCGAGTTAGCTGTTGGATTTGAAGACCCTCGTGTTCAACTTCACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD975331       <-- ..................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EV548419       --> T.................................................  Raphanus raphanistrum subsp. raphanistrum (NY)
EY914978       --> TTCCCCGAGTTAGCTGTTGGATTTGAAGACCCTCGTGTTCAACTTCACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EY898340       --> TTCCCCGAGTTAGCGGTTGGATTTGAAGATCCTCGTGTTCAACTTCACAT  Raphanus raphanistrum subsp. maritimus
EV549584       --> TTCCCCGAGTTAGCTGTTGGATTTGAAGACCCTCGTGTTCAACTTCACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
EX894186       --> TTCCCCGAGTTAGCGGTTGGATTTGAAGATCCTCGTGTTCA-CTTCACAT  Raphanus sativus cv Early Scarlet Globe
EY900047       --> TTCCCCGAGTTAGCGGTTGGATTTGAAGATCCTCGTGTTCAACTTCACAT  Raphanus raphanistrum subsp. maritimus
EY941308       --> TTCCCCGAGTTAGCGGTTGGATTTGAAGATCCTCGTGTTCAACTTCACAT  Raphanus sativus cv Early Scarlet Globe
FD535955       --> TTCCCCGAGTTAGCGGTTGGATTTGAAGATCCTCGTGTTCAACTTCACAT  Raphanus raphanistrum subsp. maritimus
FD979214       --> TTCCCCGAGTTAGCTGTTGGATTTGAAGACCCTCGTGTTCAACTTCACAT  Raphanus raphanistrum subsp. raphanistrum (NY)
FD979250       --> TTCCCCGAGTTAGCTGTTGGATTTGAAGACCCTCGTGTTCAACTTCACAT  Raphanus raphanistrum subsp. raphanistrum (NY)

               801    -    851
UN51573        --> TGGTGATGCTGTTGAGTTCCTTCGTAAGTCCCCTGCAGGGAAGTATGACG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547289       <-- TGGTGATGCTGTTGAGTTCCTTCGTAAGTCCCCTGCAGGGAAGTATGACG
EV544094       <-- TGGTGATGCTGTTGAGTTCCTTCGTAAGTCCCCTGCAGGGAAGTATGACG
EV545028       <-- TGGTGATGCTGTTGAGTTCCTTCGTAAGTCCCCTGCAGGGAAGTATGACG
FD975331       <-- ..................................................
EV548419       --> ..................................................
EY914978       --> TGGTGATGCTGTTGAGTTCCTTCGTAAGTCCCCTGCAGG-AAGTATGACG
EY898340       --> TGGTGATGCTGTTGAGTTCCTTCGTAAGTCCCCTGCAGG-AAGTATGACG
EV549584       --> TGGTGATGCTGTTGAGTTCCTTCGTAAGTCCCCTGCAGGGAAGTATGACG
EX894186       --> TGGTGATGCTGTTGAGTTCCTTCGTAAGTCCC-TGCAGG-AAGTATGATG
EY900047       --> TGGTGATGCTGTTGAGTTCCTTCGTAAGTCCCCTGCAGGGAAGTATGACG
EY941308       --> TGGTGATGCTGTTGAGTTCCTTCGTAAGTCCCCTGCAGGGAAGTATGAtg
FD535955       --> TGGTGATGCTGTTGAGTTCCTTCGTAAGTCCCtg................
FD979214       --> TGGTGATGCTGTTGAGTTCCTTCGTAAGTCCC-TGCAGG-AAGTATGACG
FD979250       --> TGGTGATGCTGTTGAGTTCCTTCGTAAGTCCCCTGCAGGGAAGTATGACG

               851    -    901
UN51573        --> CCATTATTGTCGATTCTTCAGATCCTGTTGGTCCTGCTCAGGCGCTTGTT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547289       <-- CCATTATTGTCGATTCTTCAGATCCCGTTGGTCCTGCTCAGGCGCTTGT.
EV544094       <-- CCATTATTGTCGATTCTTCAGATCCTGTTGGTCCTGCTCAGGCGCTTGTT
EV545028       <-- CCATTATTGTCGATTCTTCAGATCCTGTTGGTCCTGCTCAGGCGCTTGTT
FD975331       <-- ................TTCGGATCCTGTTGGTCCTGCTCAGGCGCTTGTT
EV548419       --> ..................................................
EY914978       --> ..................................................
EY898340       --> CCATTATTGTCGATTCTTCAGATCCTGTTGGTCCTG..............
EV549584       --> CCATTATTGTCGATTCTTCAGATCCTGTTGGTCCTGCTCAG-CGCTTGTT
EX894186       --> CCATTATTGTCGATTCTTC...............................
EY900047       --> CCATTATTGTCGATTCTTCAGATCCTGTTGGTCCTGCTCAG-CGCTTGTT
EY941308       --> c.................................................
FD535955       --> ..................................................
FD979214       --> CCATTATTGTCGATTCTTC...............................
FD979250       --> CCATTATTGTCGATTCTTCGGATCCTGTTGGTCCTGC.............

               901    -    951
UN51573        --> GAGAAGCCTTTCTTTGAAACGTTAGCTAGAGCGTTGAAGCCTGGTGGTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547289       <-- ..................................................
EV544094       <-- GAGAAGCCTTTCTTTGAAACGTTAGCTAGAGCGTTGAAGCCTGGTGGTAT
EV545028       <-- GAGAAGCCTTTCTTTGAAACGTTAGCTAGAGCGTTGAAGCCTGGTGGTAT
FD975331       <-- GAGAAGCCTTTCTTTGAAACGTTAGCTAGAGCGTTGAAGCCTGGTGGTAT
EV548419       --> ..................................................
EY914978       --> ..................................................
EY898340       --> ..................................................
EV549584       --> GAGAAGCCTTTCTT....................................
EX894186       --> ..................................................
EY900047       --> GAGAAGCCTTTCTTTGAAACGTTAGCTAGAGCGT-GAAGCC.........
EY941308       --> ..................................................
FD535955       --> ..................................................
FD979214       --> ..................................................
FD979250       --> ..................................................

               951    -   1001
UN51573        --> TCTTTGCAACATGGCGGAAAGTATGTGGCTCCATACTCATCTTATCGAAG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547289       <-- ..................................................
EV544094       <-- TCTTTGCAACATGGCGGAAAGTATGTGTCTCCATACTCATCTTATCGAAG
EV545028       <-- TCTTTGCAACATGGCGGAAAGTATGTGGCTCCATACTCATCTTATCGAAG
FD975331       <-- TCTTTACAACATGGCGGAAAGTATGTGGCTCCATACTCATCTTATCGAAG
EV548419       --> ..................................................
EY914978       --> ..................................................
EY898340       --> ..................................................
EV549584       --> ..................................................
EX894186       --> ..................................................
EY900047       --> ..................................................
EY941308       --> ..................................................
FD535955       --> ..................................................
FD979214       --> ..................................................
FD979250       --> ..................................................

               1001   -   1051
UN51573        --> ACATGATCTCCATTTGCCGCCAGACATTCAAAAACGTTCAGTACGCCTGG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547289       <-- ..................................................
EV544094       <-- ACATGATCTCCATTTGCCGCCAGACATTCAAAAACGTTCAGTACGCCTGG
EV545028       <-- ACATGATCTCCATTTGCCGCCAGACATTCAAAAACGTTCAGTACGCCTGG
FD975331       <-- ACATGATCTCCATTTGCCGCCAGACATTCAAAAACGTTCAGTACGCCTGG
EV548419       --> ..................................................
EY914978       --> ..................................................
EY898340       --> ..................................................
EV549584       --> ..................................................
EX894186       --> ..................................................
EY900047       --> ..................................................
EY941308       --> ..................................................
FD535955       --> ..................................................
FD979214       --> ..................................................
FD979250       --> ..................................................

               1051   -   1101
UN51573        --> AGCAGCGTCCCAACATATCCTAGCGGCGTGATTGGCTTTGTCTTGTGCTC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547289       <-- ..................................................
EV544094       <-- AGCAGCGTCCCAACATATCCTAGCGGCGTGATTGGCTTTGTCTTGTGCTC
EV545028       <-- AGCAGCGTCCCAACATATCCTAGCGGCGTGATTGGCTTTGTCTTGTGCTC
FD975331       <-- AGCAGCGTCCCAACATATCCTAGCGGCGTGATTGGCTTTGTCTTGTGCTC
EV548419       --> ..................................................
EY914978       --> ..................................................
EY898340       --> ..................................................
EV549584       --> ..................................................
EX894186       --> ..................................................
EY900047       --> ..................................................
EY941308       --> ..................................................
FD535955       --> ..................................................
FD979214       --> ..................................................
FD979250       --> ..................................................

               1101   -   1151
UN51573        --> TACCGAAGGACCTGCTGTTGATTTCAAGAACCCTATCAACCCTATTGAGA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547289       <-- ..................................................
EV544094       <-- TACCGAAGGACCTGCTGTTGATTTCAAGAACCCTATCAACCCTATTGAGA
EV545028       <-- TACCGAAGGACCTGCTGTTGATTTCAAGAACCCTATCAACCCTATTGAGA
FD975331       <-- TACCGAAGGACCTGCTGTTGATTTCAAGAACCCTATCAACCCTATTGAGA
EV548419       --> ..................................................
EY914978       --> ..................................................
EY898340       --> ..................................................
EV549584       --> ..................................................
EX894186       --> ..................................................
EY900047       --> ..................................................
EY941308       --> ..................................................
FD535955       --> ..................................................
FD979214       --> ..................................................
FD979250       --> ..................................................

               1151   -   1201
UN51573        --> AACTAGACGGTGCCATGACCTATAAACGAGAAATGAAGTTTTATAACTCG
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547289       <-- ..................................................
EV544094       <-- AACTAGACGGTGCCATGACCTATAAACGAGAAATGAAGTTTTATAACTCG
EV545028       <-- AACTAGACGGTGCCATGACCTATAAACGAGAAATGAAGTTTTATAACTCG
FD975331       <-- AACTAGACGGTGCCATGACCTATAAACGAGAAATGAAGTTTTATAACTCG
EV548419       --> ..................................................
EY914978       --> ..................................................
EY898340       --> ..................................................
EV549584       --> ..................................................
EX894186       --> ..................................................
EY900047       --> ..................................................
EY941308       --> ..................................................
FD535955       --> ..................................................
FD979214       --> ..................................................
FD979250       --> ..................................................

               1201   -   1251
UN51573        --> GATATGCACAGAGCAGCTTTCGCGTTACCCACATTCCTGCGGAGAGAAGT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547289       <-- ..................................................
EV544094       <-- GATATGCACAGAGCAGCTTTCGCGTTACCCACATTCCTGCGGAGAGAAGT
EV545028       <-- GATATGCACAGAGCAGCTTTCGCGTTACCCACATTCCTGCGGAGAGAAGT
FD975331       <-- GATATGCACAGAGCAGCTTTCGCGTTACCCACATTCCTGCGGAGAGAAGT
EV548419       --> ..................................................
EY914978       --> ..................................................
EY898340       --> ..................................................
EV549584       --> ..................................................
EX894186       --> ..................................................
EY900047       --> ..................................................
EY941308       --> ..................................................
FD535955       --> ..................................................
FD979214       --> ..................................................
FD979250       --> ..................................................

               1251   -   1301
UN51573        --> GGCATCACTTCTTGCTTCTTCTTGACGTCTCTTTGGCTTTGACTGTTTAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547289       <-- ..................................................
EV544094       <-- GGCATCACTTCTTGCTTCTTCTTGACGTCTCTTTGGCTTTGACTGTTTAC
EV545028       <-- GGCATCACTTCTTGCTTCTTCTTGACGTCTCTTTGGCTTTGACTGTTTAC
FD975331       <-- GGCATCACTTCTTGCTTCTTCTTGACGTCTCTTTGGCTTTGACTGTTTAC
EV548419       --> ..................................................
EY914978       --> ..................................................
EY898340       --> ..................................................
EV549584       --> ..................................................
EX894186       --> ..................................................
EY900047       --> ..................................................
EY941308       --> ..................................................
FD535955       --> ..................................................
FD979214       --> ..................................................
FD979250       --> ..................................................

               1301   -   1351
UN51573        --> TTTATCCCTCCCTCATATATAAAACTCTTAAGAGAAACTCTTCTTTATAA
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547289       <-- ..................................................
EV544094       <-- TTTATCCCTCCCTCATATATAAAACTCTTAAGAGAAACTCTTCTTTATAA
EV545028       <-- TTTATCCCTCCCTCATATATAAAACTCTTAAGAGAAACTCTTCTTTATAA
FD975331       <-- TTTATCCCTCCCTCATATATAAAACTCTTAAGAGAAACTCTTCTTTATAA
EV548419       --> ..................................................
EY914978       --> ..................................................
EY898340       --> ..................................................
EV549584       --> ..................................................
EX894186       --> ..................................................
EY900047       --> ..................................................
EY941308       --> ..................................................
FD535955       --> ..................................................
FD979214       --> ..................................................
FD979250       --> ..................................................

               1351   -   1401
UN51573        --> AGAGGAATGAAATAATTGAGAATCAGAGGAGAGGCTTTGTATCTCTGAAC
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547289       <-- ..................................................
EV544094       <-- AGAGGAATGAAATAATTGAGAATCAGAGGAGAGGCTTTGTATCTCTGAAC
EV545028       <-- AGAGGAATGAAATAATTGAGAATCAGAGGAGAGGCTTTGTATCTCTGAAC
FD975331       <-- AGAGGAATGAAATAATTGAGAATCAGAGGAGAGGCTTTGTATCTCTGAAC
EV548419       --> ..................................................
EY914978       --> ..................................................
EY898340       --> ..................................................
EV549584       --> ..................................................
EX894186       --> ..................................................
EY900047       --> ..................................................
EY941308       --> ..................................................
FD535955       --> ..................................................
FD979214       --> ..................................................
FD979250       --> ..................................................

               1401   -   1451
UN51573        --> TCACTCCTTTATAATTAAAGACTAATAATTTTTATATATTGGCTTTTCAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547289       <-- ..................................................
EV544094       <-- TCACTCCTTTATAATTAAAGACTAATAATTTTTATATATTGGCTTTTCAT
EV545028       <-- TCACTCCTTTATAATTAAAGACTAATAATTTTTc................
FD975331       <-- TCACTCCTTTATAATTAAAGACTAATAATTTTTATATATTGGCTTTTCAc
EV548419       --> ..................................................
EY914978       --> ..................................................
EY898340       --> ..................................................
EV549584       --> ..................................................
EX894186       --> ..................................................
EY900047       --> ..................................................
EY941308       --> ..................................................
FD535955       --> ..................................................
FD979214       --> ..................................................
FD979250       --> ..................................................

               1451   -   1501
UN51573        --> GAATTGTTTTTGTTTTTTATAAGTTCAATCAATCATATACATTAT
                   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
EV547289       <-- .............................................
EV544094       <-- GAATTGTTTTTGTTTTTTATAAGTTCAATCAATCATATACATTAT
EV545028       <-- .............................................
FD975331       <-- .............................................
EV548419       --> .............................................
EY914978       --> .............................................
EY898340       --> .............................................
EV549584       --> .............................................
EX894186       --> .............................................
EY900047       --> .............................................
EY941308       --> .............................................
FD535955       --> .............................................
FD979214       --> .............................................
FD979250       --> .............................................