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Simple sequence repeat (SSR)
>UN54380
GGATCGTCTTCCCCAAATTAGGGTTTCCCTTCTTTCTTCCTGGAGTTAAAAGTTAATTAAATTATGAGAGGCGGTGGCAAGAGAAGATCAAGCG
CCGGTGGTTCCGGGAAAAGCAAATCCAGATCTCCGGGACACCGCGCGAGAACAAACTCCAATTCCGCGCCGGGATCTTCCTCCGGCGGTCGTCG
CCGACGTACTACCAACACTCTGTTCGTGGAAGGAGGCGCTCTCTCCGATTTCCCTAAAGATCATTCCTTTTCGACTCCGTCTCGCGGAAGAAGC
TCTTCCGGGAAAGGATCGAAGAAGAAGCTATGCCTGATGTTGTGAAAGTGAAACCGTCGAAGAGGAATTCGGGGTTCATTTCTATAGGAGGGAT
GAAGCTTTACACTGAAGATATATCTGACGATGATGATGAAGAGAGTGGTGGAGAAGAAGAAGAAGAAGAAGGAAGCACTGGATCTGAAGAGAAC
GAGTCATCTGATGAGAGTGAAAGCTCGGAGGATATGTTTGGAAGTGATAACGAGATTGATGACGCTGTTGCGAAGGATTACTTGGAAGGTATTG
GTGGGAGTGAGAATATGTTGGATGCTCACTGGTTGGCAGAAGAGTCGTTAGATCAACTGGATTTGTCTGGAAGTGATTCTTCTGCTGAGAAGAA
AACAGGGAAGAAGTTGACTGGTTTTGCTCTGCAAAAGCGTCAATGTAGTATGGGAAGAAGAAAGTGACAAGAAGTCATTACTCTGGGCATGGT |
Primers for UN54380 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AGGAATTCGGGGTTCATTTC |
60.131 |
20 |
TCCAAACATATCCTCCGAGC |
60.036 |
20 |
168 |
345 |
512 |
2 |
GGAATTCGGGGTTCATTTCT |
60.131 |
20 |
TCCAAACATATCCTCCGAGC |
60.036 |
20 |
167 |
346 |
512 |
3 |
GAGGAATTCGGGGTTCATTT |
60.131 |
20 |
TCCAAACATATCCTCCGAGC |
60.036 |
20 |
169 |
344 |
512 |
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