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Simple sequence repeat (SSR)
>UN54414
GGAACACACTCCGATTTTGGCTCTTCCTTCCTTCCCCTCACTACCTTACAAAAAAACCCTAAACCCCCAATTTTCTCCTTCACTCACAATCGTT
GAAAAATGGAAGACGAAGAAGGCATCGGGTTGATTTTAGCCAGAGCCACCGAGCTCAGACTCAAGATCAGCGATTGCATCGACAGCTCCAGCAC
CCCCGTCGGCGGAGACGGAGACGAGCTTTCTTTTCCCGGAGAAGGAGAGAAAGATAGGACTATTATCAGGAGTCAAGATAAAGATTTTGATTCA
ATCAGCTGTGGAGATGTAGAGGAAGAGGAAGAAGAAGAAGAAGCTGAACAGCTTTTGCGTATACGCGATGCTCTTGAATCCCTAGAATCTCAGC
TTGCTGCTTTACAGAATCAACGGCAGAGACAACAGTATGAGAAGCAAGTGGCTCTCTCTGAGATTGATCACAGCAGGAAGGTGTTGCTCGAGAA
GCTCAAGGAGTACAAAGGGAAAGAACTCGTCGTACTACGCGAGGCTTCGACTTTCGCTGGCGAGAGAGTTGACTATGAGAGCGATCTTCTCCTT
CCTCCTTACCATGTTCATCCTCCTCCTCTCTCCCTCGGTTTAGATAACAGCAATGGCTACTTGCCTCATCTACCGTCTAAGCAGAAGATATCTG
ATGAAAACGGGTTTGGGTCGGGACATGTGAGAAAGGAAACAGAGGTGGAAAGCCCCCGCGGAGCTCAAATCGTGGAGTTTTTCGCTTCTTAGGC
TCTGTCGCCAGATCATGCTTCCGGTCATCGGTGTGATTTCAATCTTGTCTGCTTCGGGATATGGTCCCGGAGATCAGT |
Primers for UN54414 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AATGGAAGACGAAGAAGGCA |
59.813 |
20 |
TAGGGATTCAAGAGCATCGC |
60.318 |
20 |
268 |
99 |
366 |
2 |
TGATTTTAGCCAGAGCCACC |
60.214 |
20 |
TAGGGATTCAAGAGCATCGC |
60.318 |
20 |
242 |
125 |
366 |
3 |
CGGGTTGATTTTAGCCAGAG |
59.702 |
20 |
TAGGGATTCAAGAGCATCGC |
60.318 |
20 |
247 |
120 |
366 |
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