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Simple sequence repeat (SSR)
>UN54425
GGATTTTATTTGATAAATCTCTGATACAAATATCAGAAGAGAGAGTCATAAGTATGCACCATGAGCTGCAAAGATTAGGCAGAGATGTAGTTCT
TGAACCATTCATTCGCCAGCCTGCAAAGCGTCAGTTCTTGATGGATACTAGCGAGGGTTGCGACGTTCTTATTGATCACACTGGTAATGAGAGG
ATGTTTGGCATTTCTTTCAAAGTATCAGGGACATCGAGAAGAGATGAATTCAAAGGAATGAAAAAGTTGCAGTTTTTGAGTATGTTCAAGGAGA
GTTTGTACGGTAAAGAAGTCAGATTTCATTTAGTGAAAGGCCTCCTCTCTGTGGGAACGCCTTGATAATATTTTTTGTACATTTTGTCAAAGAC
AACACACGTATTCGACTATAACCTACATTGTATAGCTTGGGAAGCAGCCGGTATCGTGGTCCTCTGAAGCAAGAGAGTGAGCAACATCGTTCGT
TGACAAAAGCAAAGCAGGCTCTAACAACCGCTGTCTCGGAAGGCAAAGTGGTTATACTCGCTTATGTCTGGACTTTGTCTCATTTCTTTTGTCG
TCCAACTATATATATTGTGATCACAGGGCAGAATGGAGGAAGAGAAACTCACAGCAACCATAGCCGGAGAGGATTCTCAGAATTGATACTAGCC
TAATTTGGATTCTCCTATTTTCTTCACAAGATCCTCTCAGAAGAAATAAAGATTCGGTTAAACTTGTAAAGAGAGAGAGAGAGGATGTCAGTTT
GCATAAATAGATGGTCCATTGTAACAGAATCTTTATGCATCTGTGGATGCATCTGGGAGAGATATGGACTCCCAGTAAACCATAGTTCTGGATA
TGTAA |
Primers for UN54425 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ACCATAGCCGGAGAGGATTC |
60.431 |
20 |
GGGAGTCCATATCTCTCCCAG |
59.904 |
21 |
205 |
621 |
825 |
2 |
ACCATAGCCGGAGAGGATTC |
60.431 |
20 |
GGGAGTCCATATCTCTCCCA |
58.891 |
20 |
205 |
621 |
825 |
3 |
ACCATAGCCGGAGAGGATTC |
60.431 |
20 |
CTCCCAGATGCATCCACAG |
60.213 |
19 |
191 |
621 |
811 |
|
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