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Simple sequence repeat (SSR)
>UN54501
GGACACCAACCGACGGCTATGGCAACCATTTTCAGATTCTCACTCGGTCTACTCCCGGTTTCCGCCGCCTTGACATGTTGCTCAATCCGGTTCC
CCGTTTCAAGACCCGCTTCGTTGAACCGTAATCTGTATCATTTATCTTCTTCTTCTTCTTCTTCTTTGAAGACCAAAGCAGGTTGGTTACTGGG
CCTCGGGGACAACAAGAAAAAGAAAGTGGATATACCGGATATCGTGGCAGCTGGAGATCCGGTTCTCCACGAAAAGGCCCGAGAAGTCGACCCT
GAAGAAATCGGGTCGGAGCGTATTCAGAAGATAATTGATGATATGGTTAAAGTAATGAGATTGGCTCCTGGAGTTTGGCCTTTGCTGCTCCTCA
GATTGGTGTCCCCCTTAAGAATCATTTGTTCTTGGAGATACAAAAGAGTATATCAGTTACGCACCAAAGGAGGAGACTTTTGCTCAAGACAGAC
GTCCCCTTTTGATCTTATGGTAATGGGTGAATCCCGGAGCTTAAAAGCGAGTAGCGACAAGAAAGCTCTCTTCTTTGAAGGATGTGTGAGTGTT
GATGGATTCAGAGCTGTGGGTGGAGAGGCACCTTGAAGTGGTAGTGACAGGCTACGATCGTCAAGGGAAATGGGATGGAAGTGAATGCTTCGGG
CTGGCAAGCGAGGATTTTGCAGCATGAGTGTGATCATTTGGATGGTTATCTTTAAGTTGATAAGATGATACCACGCACTTTTAGGACAGTCGAT
AACTTGGAATTGCCTCTAGCCGAAGACTGTCCTAAA |
Primers for UN54501 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ACTCGGTCTACTCCCGGTTT |
59.994 |
20 |
TCTTTTTCTTGTTGTCCCCG |
60.081 |
20 |
170 |
42 |
211 |
2 |
ACTCGGTCTACTCCCGGTTT |
59.994 |
20 |
CTTTTTCTTGTTGTCCCCGA |
60.081 |
20 |
169 |
42 |
210 |
3 |
ACTCGGTCTACTCCCGGTTT |
59.994 |
20 |
TTTTTCTTGTTGTCCCCGAG |
60.081 |
20 |
168 |
42 |
209 |
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