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Simple sequence repeat (SSR)
>UN54540
GGGCCGATGTAACTGTTACAATCTAACACCATGCTTCATCAATGTTCTTCATGAGTAACATTGAAACGCGTTGAGCAGATTCTCCTCCCCACAC
ACTATATATCTCACAAGGTTTTCCTCCTAGATTGATTGTGTAGAAGAACGTGTTGAAAGCATCATGTGCAAAGACACCGGCGAAATCGTCTCCT
TCCGTCAAGGAAAAAATTCACAAAATCCAAAGGTCTCTCATCTGTTCTACCTGTTTATAAATCTCCAGCAGCCAAAAAGAATAAGATCTGACTC
TGTAGGCAGCACCACCACCGCCGGCTCTTCCTCCCTCTCCGTCGAAGAAGAAGAAGAAGAAGATGCTGACAGCTTCGACGGCGAACATCGTCTA
CAAAAGAAGCCAGTCCTTGCAGAAGGAGGATGCGGCAATATTTCCCGACAAAGAAACCCTCAAATTCATTTCTCAGAGTTGAAAGCAGGCTGAT
GCAGACAAATTGTTGAGACGATGCTGCTTCGATTTTGAGAGGCTCGGAGCCTCGGAATGTGAAGAAAATGCTTATGGGTGTTGATATGCTGTTC
ATTAATTGGAAGCCCGAGCTTCAAGTATGGTGACGCCCCAGTTGCTATTAGATTCACGGACCTAACCGTCTTCCTTAAACATTCAGAAACAGTT
GAACCCGTTCCGCCCTGAGAGTTTCCGGTTCCACAATTATGAATAACTCATGGCGCTAGCCAATACGAACCCTGATCTGCCAGGGTATTAGAAC
AATTTTCATTTCCAATAAAGAGACACATAGTATTCAACGCATCATGGTGATTGAGAATTAAACAATCGTCTGCCTGAGTGTAACTGCCTTGCGA
TTGAGAGCTCTG |
Primers for UN54540 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ATCTCCAGCAGCCAAAAAGA |
59.955 |
20 |
CGAGCCTCTCAAAATCGAAG |
60.088 |
20 |
268 |
249 |
516 |
2 |
ATCTCCAGCAGCCAAAAAGA |
59.955 |
20 |
AGCCTCTCAAAATCGAAGCA |
60.096 |
20 |
266 |
249 |
514 |
3 |
ATCTCCAGCAGCCAAAAAGA |
59.955 |
20 |
GCCTCTCAAAATCGAAGCAG |
60.096 |
20 |
265 |
249 |
513 |
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