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Simple sequence repeat (SSR)
>UN54550
GGAGCTTTCCAGTTTCGCTGCGCCTCTTGAAAAATCGGATCCGAGTATCAAAGGTTTCAGGAAAAAATGAAGCATTCAAAGGATCCGTTTGAAG
CAGCGATAGAGGAGGAGGAGGAGCAAGACGAGTCACCGCCGGAATCGCCCGGAGGCGGAGGCGATGACGAGGGACGGATTGAAATCGACCAGGC
TCCGGAGGAGAGTGAGAGAGACGTGGGTGGTGTTCGCCGTCAGAGCAAGAAATCTAAAACCTCCTCCTCCGTCGTTGTTGCTGCTGAAGGGAAG
AACAAAGATGAAGAAGAGGAGGAAGAGAACATGGAAGCTGAGTTAACCAAGTATCCAACTACTGTTGATCCAGCTAAGATGGCCAAGATGCAGG
TCATTTTGTCGCAGTTCACTGAGGATCAAATGAGCAGATATGAATCTTTTAGGAGATCTGCATTTCAAAAAGGGAACATGAGGAAGTTATTACA
GGGAGTGACAGGGAGTCAGAAGATCAGTATGCCAGTTATAATTGTGAACTGTGGTATCGCAAAGATGTTTGTTGGTGAACTAGTGGAAACAGCT
AGAGTTGTAATGGGGGGAAAGGAACGACTCAGGTCCTATCAGACCTTGCCATATCGGAGAGTCTTATAGGAGACTTAAGCTCGAAGGCAAAGTA
CCTAAAAGATCTGTTCCTCGTCTTTTCCGCTAACTCAGAACAAGATCCAAAAGAGGAGTTACTTTCTCAGCCCCATTAGATATGAGTCT |
Primers for UN54550 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AAAGGATCCGTTTGAAGCAG |
59.312 |
20 |
ACCACCCACGTCTCTCTCAC |
60.161 |
20 |
142 |
78 |
219 |
| 2 |
AAAGGATCCGTTTGAAGCAG |
59.312 |
20 |
ACACCACCCACGTCTCTCTC |
60.161 |
20 |
144 |
78 |
221 |
| 3 |
AAAGGATCCGTTTGAAGCAG |
59.312 |
20 |
CCACCCACGTCTCTCTCACT |
60.306 |
20 |
141 |
78 |
218 |
|
|
