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Simple sequence repeat (SSR)
>UN54567
GGGAAGCTGAATTTCAGAAATGGCGATTTCTACGTTACTCTCAACCTCTTCTTTCACTCTATCTCCCTCATCTAGAAAAACCAATCTCCTCACT
CCAATACCCACTAGGGCTCTCTCATCATCTCCCATCTCTCCAGGAGGATTGAATCGAAACAGTTTCATACAGAGTCAAAGTCCCAGTTTTTACT
ACTACCCATCACGCCGTAACTTCACCAGACGCCGCCGCTCTTCTTCTCCAGATGGGTTTCTCGGAACAACCAAAGAAGATGAAGATGACGACGA
AAGCTTCCAGCTTGTTGGCGTAAACCCGTTGAGATTCGCGGTATGCGTTGTGTTCTGGACCACTCTCTCTCTGCTCTGGTTCGCTAGGTCCGGC
GATGCCAAAGCCGCCGCCGCCGCCGCTGACTCCACCATCAAATCATCCTCCTTTGGTCTCAGAATCGCCGCCGCTCTCCGCCGGTTCGGTTGGC
GAGACGAATCTGTGGTCTTTGCTTTAGCCACGCTTCCGGTTATCGAGCTCTTTGTAGCCGGTGCTTGGACAGGAGCTATCATAGCATCGGTCCT
AGACATGCCCTTCTGGTCTGCGGTTACGTCTAATTTCTGCGGGGTTGTGTTGGCGGGACTGCTTGTGAACTTGCTGGTGAATCTTGGTCTGAGA
GAAGCCTTTGTGGCTGGTGTTGCTCTCTTCTTTGTGTCTACGTTTATGTGGAGTGTATTGAGGAAGATTAGGAAGTCTGTAAGACCAACTTTGC
CTTGAATTGGTTTCTTTTTAAATGCCAAGGACTTCTTCGCATATTGCTTCTGTTTCTCATGTTATAATTTTGGATT |
Primers for UN54567 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CTACCCATCACGCCGTAACT |
60.015 |
20 |
GGAGGATGATTTGATGGTGG |
60.135 |
20 |
238 |
190 |
427 |
| 2 |
GGTTTCTCGGAACAACCAAA |
59.948 |
20 |
GGAGGATGATTTGATGGTGG |
60.135 |
20 |
185 |
243 |
427 |
| 3 |
GGTTTCTCGGAACAACCAAA |
59.948 |
20 |
AAGCGTGGCTAAAGCAAAGA |
60.152 |
20 |
263 |
243 |
505 |
|
|
