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Simple sequence repeat (SSR)
>UN05079
AGAAGCATAGTGTCACTATATTCTACACTACATTACAACATTCCACCCAACTGCAATTACAGCTGGAAGAAAAAAAAATCGTCTACATCAACAA
CAACAACAACAACAACAACAATAATGGGGTTGATTCACTAACAAGTGGGGACTAAGAATGTAGTTTTTTTACTCCACCACAGAGGCAATCAAGC
CCTACGGCTCTGTATTTGATGATAACAAGAGACTCAGTGCTGCTGTTAGAAGAGTAGAGTACCGAGCAAGGCAGATGTTAAGGAAACAGTGAGA
TTGTCATCAATGTCGGTGCTTATAGGGAGTGATTCCACAATAGCCGATGCTATAGAGATGATGAAGAAGCGAAGAATCATATCCCACCCACTGT
TCTCAATGTAACCAAACGAAGCAAAGTAGTACATATACGCAACGGATACTGAGAATCCTGCGATAGCCATCCCAATGCTACCAGCGATTGATTT
GTTTCTGTTGTAAGGAAGCTTTTTTGTTCCAAGCCGCCTCCCAACAATGTCAGCCATACCATCTCCTGCGCAGAGGTTGCATATCACTGCAATG
GCTATTGGGGATGTCTTCCAATAGAAGATACATACCAATGTGATTGAGATTGCATAATAAAGCGGTCCCTTGAGTAGTTCCCTGCGATCTCCGT
GTCTGCTCATAGACTTGATAGTTCCTTAGTCTTGGTAGACTCCAAGGCCCAGGAGCAGCATCCTTATTATATTGACTCCAATTATAAGAGAAGC
GAAGAGCGCTCCTTGGAGTCCAGAACTGAAGAGTGGCCAGCAAAGCGTAAAAGCAAGGCCAATATTTATGTGCACAAACTTCCTGATGAGTTTC
TGGTCGAAGATGCCGCGCTTGCCAATCTCTCCCCAGGAACCGAGGCACGAGAAAGCGACGACGCCGGAGATTCCGGTGGCGCAGACATCTGAGA
GTACTGTGTTTTCCGGAAACATAACGGCTTGTTGATCTGAAGGCTAGTCGAGATTCCAAGAGTTCGATGGAACATTTTTCTGCAAATCCCCC |
Primers for UN05079 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ACAACATTCCACCCAACTGC |
60.823 |
20 |
AGCACCGACATTGATGACAA |
60.12 |
20 |
268 |
35 |
302 |
| 2 |
ACAACATTCCACCCAACTGC |
60.823 |
20 |
AAGCACCGACATTGATGACA |
60.12 |
20 |
269 |
35 |
303 |
| 3 |
ACAACATTCCACCCAACTGC |
60.823 |
20 |
TCTGCCTTGCTCGGTACTCT |
60.156 |
20 |
229 |
35 |
263 |
|
|
