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Simple sequence repeat (SSR)
>UN54737
CCAGATCACACACTATCACAGCACAGAGAGAACCAGAATTTGAAAGAACACAAAGCCAAACAATTTCCGACAAAAAAAAAAGAGATGAAAGATT
ACAACATTCTTTTTGTTAGTTATCATCAATCATAACTGCTCTCAAAACCACCTAAGCGTAAACTGAACCATAAGAGAGAGCCATGAGAAGCACC
GCCGCTTGCTCTTCCTCCCCGAGCTTCCGCAGCTGCTTCTCCACCGTCGATCGTTTCGTCATCCCCAAATCCATCATCCTCAGTGATTCACCAA
ATTTAGGGTTTCTTTTCAGATCGCCGCCGCCGCCGCCGCCGCCGCAGGAGTTTGGTTTCTTCGGCTGCTTCTTGTCTTCCCCTCCTCCTCTTCT
TTTCTTCCTGTTTCTGATCCCACACGCGTTACAAAGCGACTACACAAGAAGAAAAGAACCAAACATCAGATCAGATCGGATCAGATCAAACTCG
GTTAGGGTTTATTATTGGTTCTCTGACCTTTGGACCGGCGGGACCGCCACGCCAGAAAGGAGTTTTGCTTGTACCACAATCGGCGCAAGTCTTC
TTGTCGTTACAACAAGCCTTGTTCTGTTCGATCACATCCTCTCCACCTATTCTTCTCTCCGAATCCTGAAAAAACAAGAAGATCATTCAACAAA
GAGCGATCAGCTTTAACAAACAGATCATCTCCCGGAAACAGAGATCGGATCAGTCACCTTCTCGCTGTGATCTAGCATTTCTCCACTTCCTATG
ATCAGAATCGCTAGGGTTTGAGATTGATCGCCC |
Primers for UN54737 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CCCAAATCCATCATCCTCAG |
60.272 |
20 |
CAAGAAGCAGCCGAAGAAAC |
60.132 |
20 |
105 |
252 |
356 |
2 |
CCCAAATCCATCATCCTCAG |
60.272 |
20 |
ACAAGAAGCAGCCGAAGAAA |
60.132 |
20 |
106 |
252 |
357 |
3 |
CCCAAATCCATCATCCTCAG |
60.272 |
20 |
AGGAGGGGAAGACAAGAAGC |
59.817 |
20 |
117 |
252 |
368 |
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