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Simple sequence repeat (SSR)
>UN54800
GGAAACTTTTCAACACACCAGATCTTTTTTGTTACTTATTTGCTCACCAAAACTTGTCTACTTAACAAGCCTCCCAAATCTCAACAATTTCATT
CACAAATCCATCCGTAATATCGAGAGATCATCCTAGAAAAACCATAAAATCACTTATTTAAAAGAAAGAAGAAAAAAGAAGATGGATAATAACA
ATAACCAGCAAACGTTTTGGCAGTTCAGCGATCAATTGAGAGTCCTCCAGGCGCCCCACAATCTTTCCTTAAACGACTCCATCTGGAGCACCAC
CAACAAACGCACCGACGACCGCAGAAACTTCGACATCGCAGCCGCCTCCACCAACAAAACCCTATCGAATATCACAACAACAACAAGGCTTCTT
CCGACAACAACAACAACAACAACAACAACGCTGCGAGCTGGAACACCTGGAAGTCTATCTCCAACGGTTTCGGACCCATCGGCTCAAAATCAAC
AACATCCACAAACGTCAATTTCAACCACACCGACGACAACCCCTGGAAACTCAACAACTCGGACGTGAACAACGGCGATTTCAACAAGGGCATC
TACTCCTCCCAGCCCAAGAGCTATGGCTTCAATTTCAAGAACAACAAGGGGATGATCATCGATCAAGATCATCATCAGATCTCCCAGAAAGGAG
TAGGGAAGAAGAACAGGAAGAATCAGAAGAATAACAACAACAACAAAGGAAGATGACAAGATCACCAACGAGAAGAGGTTTAAGACTCTTCCTC
CCGCGGAGGCACTTCCGAGGAACGAGACCATCGGTGGTTACATCTTTGTCTGCAACAACGACACCATGGGAGGAGAATCTGAAGCGCCAGCTA |
Primers for UN54800 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCTCCACCAACAAAACCCTA |
59.824 |
20 |
TTGAGTTTCCAGGGGTTGTC |
59.943 |
20 |
198 |
327 |
524 |
| 2 |
CCTCCACCAACAAAACCCTA |
59.824 |
20 |
CCGAAACCGTTGGAGATAGA |
60.066 |
20 |
123 |
327 |
449 |
| 3 |
CCTCCACCAACAAAACCCTA |
59.824 |
20 |
TCCGAAACCGTTGGAGATAG |
60.066 |
20 |
124 |
327 |
450 |
|
|
