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Simple sequence repeat (SSR)
>UN54811
GAAGGCTGCTGCTAAAAAGGATAGCAGTAGTGATGAATCCGACTCTGATGAATCCGATGAGGAAGAAACCCCAAAGAAGAAGAACGCTGATGTA
GAGACGGTGGTCGCTTTGGCCATGTTGAGTTTGCTACTGCTGAAGCTGCACAGAAGGCATTGCAACTCCACGGTAAGCCCTTGCTTGGTCGTGA
TATTCGTCTTGATGTTGCTGCTGAGAGGGGAGACAGACCCGCATACACTCCACAAAGCGGTAACGGTGGTGGTAACTTCAGAAGCGGTGGTGGT
GGTGGTGGTGACGGTCAAAAGATTTTCGTTAAGGGATTCGATGCGTCTCTTGCTGAGGATGATATCAGGCATGCATTGACTGAACATTTTACTT
CATGTGGAGAGATCACAAGGGTCTCTGTTCCCATGGACCGTGAAACTGGTTCTTCCAAAGGAATTGCTTTCATTGACTTTAAAGAAGCCGCAGA
GAAGGCGTTTGACCTTAATGGTACTGAAGCGGCAGGAGGGTATCTCGTTGTTGACGAGTCCAAACCGAGGGATCATACAGCAAACCTAGTTTTT
CAGGCACGAAGACTACCTTTGACGATTAGAAGCCTTATGGAGAAGAGAATGTGTTCTCAAGTCCTTTAGCCGTTTGATGCTATGCTTGTTTTTA
TTATTTTAGTTTTTTTTCTACTCGAGTCAGTGTCTGAATCCTTATATTTTTGTCTGAATTTAAATTAAAACTCAA |
Primers for UN54811 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CCCAAAGAAGAAGAACGCTG |
59.986 |
20 |
ATCCTCAGCAAGAGACGCAT |
59.981 |
20 |
273 |
70 |
342 |
2 |
GCTTTGGCCATGTTGAGTTT |
60.118 |
20 |
ATCCTCAGCAAGAGACGCAT |
59.981 |
20 |
236 |
107 |
342 |
3 |
TTGATGTTGCTGCTGAGAGG |
60.136 |
20 |
ATCCTCAGCAAGAGACGCAT |
59.981 |
20 |
146 |
197 |
342 |
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