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Simple sequence repeat (SSR)
>UN54835
GGAGATTTCAATTTCATGGCCGTGTGTAGGATGAAGATTCTGCTCACGCTTTACCAAATGAGAAGTAGATCAAAGACTCAGCAAAAACCCAGTA
GCCACCAACTCATCTCTTCCCGGAATCAATAGTTTATGTGATCAGTCATGAACCAATAAACTAATGGATACGCAAAAATGGAAACAGAGAGAGC
TCGTTCTTATACTCTTCTACGCCTATGTTCTACAGATATCGCTTCGTCTCTCTCACGGTTAAGAATGATTTTGGAGAATTCCTCCCTCGTGAAT
TCAAAGCGTTGTCTGGTGCTGTCACAATCACATGCCTCATGGTACATAGCTTTTGCTCAATACTCCTGGTTTTATTAGTGTGGTTGCCTCCATG
CAAACGAATACATCGATGGCTGAAAAATAAGACTTAAGTATCACAATTACAGATGGCAAATCTTGCTGGCTATGTCATTGGACCGTCAGGTCTA
AGCTGGTTCGTATCCAGCTTTCTTAGGAACCATGAACTTTCTCATCTGTCATGTCCTCAAAATTCCACATTCATCAATGACAATGATACAGGGA
ATGCGACTAAGTCACGTCATCAAGACTCATCAGAGAGAGAGAGCAATAGGAAGTAGTATAAAAGCAGAGTTCGTTTACATTTTTACTTCATCGA
AAAAGATCAAAAGTTTGTTAGAGTTTTCTTCTTCCTTTTCTCTGTGGTTACTATGATTTTTCTGTGAATTTTCTG |
Primers for UN54835 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GTCATTGGACCGTCAGGTCT |
59.969 |
20 |
CCACAGAGAAAAGGAAGAAGAAA |
59.053 |
23 |
256 |
450 |
705 |
| 2 |
GACCGTCAGGTCTAAGCTGG |
59.867 |
20 |
CCACAGAGAAAAGGAAGAAGAAA |
59.053 |
23 |
249 |
457 |
705 |
| 3 |
TTGCTGGCTATGTCATTGGA |
60.22 |
20 |
CCACAGAGAAAAGGAAGAAGAAA |
59.053 |
23 |
267 |
439 |
705 |
|
|
