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Simple sequence repeat (SSR)
>UN54839
GGGACCGCTTACCCGGTCATCATTGGGAGCGTCGCAAGTCGCTCTAAAGGCGACTCCTTTAATAGTAGATAGATCGCTTGCTCCCGAGTTTGGG
GATTTTGACCTTTCAATCCTCTGGATCGAATTGGTCCCTTTTGGTGGTTCACTCACACACAAATGTGTTTGGCTTCAGCAGTAGTTACTACAAA
ACCTATAGCGCCGCTTTAACTTCTTGTTCAAACTCCAGTTCTAAGGCCATGGCTCCAGGAAACCACCACCGTTATTATTACCCAGAAGTGAAAT
CTCCTCTGCGGAGACAACTCCACGCTCCTTCCCCTGTCCGCAAGTTCGGCCTCTCTGCTTTGCCGAAACAGAGTCGTAGCAGCTTAGAAAGGAA
GACACTTGATTTGCCTCCTTTGGGCTATACAGAAGTGATTGATGTTGACGACGACGACGAGGTTGATTACGTGGAGGTTATATCCTCCTCCGAC
GACGACGACGAGGTTGAGATTGTAGAGAACGTTGCGGCTATGGAAGAGAGTAGTGAAAAGGAAGAGTCTTTAGACGATGCCAATCTGAAAAACG
GGAGCTTTATGGCGGTGGATGATTCTCAAGCTGACCCTGTGACTGATGTCTACAGTTTCGAAGCGTATAGAAAGACTCTCAAGAGCGCCGAGAA
CCGGACTTCTAAACTGAAAGCCAGAGCTTTGGCGATGTTATGAGAGAAAGGTGTCG |
Primers for UN54839 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
| 1 |
ATTTGCCTCCTTTGGGCTAT |
59.93 |
20 |
TCAGTCACAGGGTCAGCTTG |
60.022 |
20 |
226 |
385 |
610 |
| 2 |
ATTGATGTTGACGACGACGA |
60.12 |
20 |
TCAGTCACAGGGTCAGCTTG |
60.022 |
20 |
197 |
414 |
610 |
| 3 |
ATTGATGTTGACGACGACGA |
60.12 |
20 |
CTCTCTTCCATAGCCGCAAC |
59.978 |
20 |
107 |
414 |
520 |
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