Simple sequence repeat (SSR)
>UN55001
GTTTTCTGAGAGAGAATAAAAATAATGTTGCAGTTTCCGACGTTGATGAGCCAGTTTCCGTCATCGACGAAGACGATCCCGGCGTCGCATTTGC
TACCTATACAGTGGCCCCAGCCTCAGAACGAAGAGATTCTTCTCGCCATGGAAGAAGCTGAGTTCGAAGAAAAGTGCAACGAGATAAGAAAGAT
GAGTCCTAGCTTACCCGTAATTGGAAAACCAGTCGTTGACAACCATCAAGAAGAAGACGATAATGAAGCAGATGATGATGATGATGATGCAGAC
AATGCAGAGGAATCAGATGGTGAATAATTCGAGCAAGAAACTGGTTGAATGATCTCTCCATATATATAAAAAAAAAGTTTATTGATGGCATTAA
CTTGATTTTTGAGGATTCTTGTCTAAACCTTCTAGTGTCAAAACGACTGTGATTCCGAGTTTGGAAGCTCGTCTTCCCTTTGTTAGTAACAAGT
TGAGACGATTTGGGTTGGCTTTGTGTGTAATGAGTCTAATGACTAAAAGATTTCATGGT |
Primers for UN55001 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TGGAAAACCAGTCGTTGACA |
60.128 |
20 |
CGGAATCACAGTCGTTTTGA |
59.691 |
20 |
224 |
210 |
433 |
| 2 |
TGGAAAACCAGTCGTTGACA |
60.128 |
20 |
TCGGAATCACAGTCGTTTTG |
59.691 |
20 |
225 |
210 |
434 |
| 3 |
TGGAAAACCAGTCGTTGACA |
60.128 |
20 |
GCTTCCAAACTCGGAATCAC |
59.676 |
20 |
235 |
210 |
444 |
|
|
