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Simple sequence repeat (SSR)
>UN55007
GGGTTCTCTATCATAGCCAAAAGGTTGGGTTCCAGTCTGAGAGTGTAACTCAATAGAGCGACAACAAAAATCTCCCTTTCAATCAAAAAACCCA
TATAAAATCGAAGCTGACGGATTTTTTGCTTATTGTTAAATTTGTAGATCACAAAGTCGCTTCCTTTCGAGTCCTGCGCCTAACTCTGCTCAGA
ACTGGGCATCTCGCGGCCACAACTTACGACAAGCAACTCGATCATACGCAAGTGGAGGTCGTAAAGACTACAATCTCCTTGGTAGTAATGTGAA
ACCAGGGGATGCTGATTTTAGAAAAGCTTGGGAGAAAGATATTAAGGATGATGATGATGATGATGACACTTTATGGTCAGGAAGTGAAGACGAA
AGCGATGATGATAAAGGAAAACCGTCTTGAGAACGAGGTTAAGAAAGCTAGGCAACAAGCTAAAGACACCTCTGATCTAATCGATGCAGACGAC
AGTGACGAGTTATACAGCGTTTGGTCTGGAAGCGACGAGGAGAAAACGTTATGGACCGGCGATGAAGGTGATGACGACGACGATATTCCGACAG
AACCACACCCGAACGAAGCATCTGATAAGTACTTGGACAAGCTGTTTGAGTTCGAAGAGAAACCGAAGTACAGGACGATCTCTGAGCTGTTGAA
ATCCGAAAACGAGCCTGAGGAGCTTTCACCAGGTAAACAGGCGAGGAAGCTTGCTGTTGAGAACGCGTTGAAGAAACTGAACAAAGGGCCTGAC
GGGCGCTACACAACGTGTGGGAAGTGATGAGTGATGTCGACATTCTGATTGGAGCGTTCGAGACATCATCTCAGGCCTGATATGAGAGCTGAGA
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Primers for UN55007 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GCCACAACTTACGACAAGCA |
59.911 |
20 |
CATCATCGCTTTCGTCTTCA |
59.948 |
20 |
183 |
204 |
386 |
| 2 |
GCCACAACTTACGACAAGCA |
59.911 |
20 |
CTCGTCACTGTCGTCTGCAT |
60.055 |
20 |
276 |
204 |
479 |
| 3 |
CAAAGTCGCTTCCTTTCGAG |
60.125 |
20 |
CATCATCGCTTTCGTCTTCA |
59.948 |
20 |
241 |
146 |
386 |
|
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