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Simple sequence repeat (SSR)
>UN55016
GGAACTCCACGGCGCAGATCCGAGGAGTTTCTGCTCTCTTTTGAACATTTCTTCTCTCTCTCTCTCTAGATCTCTCTTCTTCCCTTCTCTAACA
TCAGTCATGGCAGGAATGGCGTCAGAAGGAACCCAGTATGATCCTCGTCAGTTTGATTCTAAGATGAATGCAATACTCGGTGAGGAAGGAGAAG
AAACTTTCTACACCACAATTGATGAAGTATGTGATAGCTTTGATGCTATGGAACTCAGGTCTGATCTCCTTAGAGGCATCTATGCCTACGGTTT
TGAGAAGCCTTCTGCTATTCAACAGAGAGGGATCATACCATTCTGCAAGGGTCTTGACGTGATCCAGCAAGCTCAATCCGGAACCGGAAAGACC
GCTACCTTCTGCTCCGGCGTTCTACAGCAGCTTGACTACACTCTTGTTCAGTGCCAAGCTCTCGTTCTGGCTCCCACCAGAGAACTCGCTCAGC
AGATCGAGAAGGTCATGAGGGCTCTCGGTGACTACCTCGGTGTCAAGGTCCACGCCTGCGTCGGTGGAACGAGCGTCCGTGAGGATCAACGCAT
TCTCCAGTCTGGTGTCCACGTTGTTGTCGGAACGCCCGGTCGTGTCTTCGACATGTTGCGTAGACGGTCTCTCCGCGCTGATGCAATCAAGATG
TTTGTTCTTGACGAAGCGGATGAGATGCTCTCTCGTGGTTT |
Primers for UN55016 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CAGATCCGAGGAGTTTCTGC |
59.95 |
20 |
TTCTTCTCCTTCCTCACCGA |
59.92 |
20 |
176 |
15 |
190 |
2 |
GCAGATCCGAGGAGTTTCTG |
59.95 |
20 |
TTCTTCTCCTTCCTCACCGA |
59.92 |
20 |
177 |
14 |
190 |
3 |
GCAGATCCGAGGAGTTTCTG |
59.95 |
20 |
TACTGGGTTCCTTCTGACGC |
60.255 |
20 |
119 |
14 |
132 |
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