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Simple sequence repeat (SSR)
>UN55105
GGCCGGTGACATTGATCGGAGATTCTCACTACCTCAAGAACCTCGAAAACTCCCGCGAGATGGGGATAGAGATATCAGGTCAAATCGAGAAAAT
CAATGGCAAAGAGCTGAGCTACAACGACTTCGCAGAGAGGTACTTAGCCAAGAGCCAGCCGGTGGTAATCTCCGATCTCACCGAAGATTGGCTA
GCTCGGAAAGATTGGGTCGATGAGAATGGACTCCCTAATCTCAATTTCTTCGCTACACACTTCGGAAAGTCCAGAGTTCAGGTTGCAGATTGTG
ATAGGAGAGAGTATACAGATCAGAAGAGATTAGAAATGTCTGTTTTGGAGTTTGTTGAGCAATGGGCTAATAAGGATTCTGTTAAGGACAATGG
AGATGATGATGATGATGATGGAGAGTCTGTGTTGTATCTGAAAGACTGGCACTTTGTCAAGGAGTATCCAGACTATACAGCCTACAAGACGCCA
CAGGTGTTTTCTGATGACTGGCTTAATATCTATTTAGACCATTACCAAATGCATGAGGATAGAGAGAGTTTCCAGAAGTACGATCAAATAAGCT
GCGCTGATTATCGGTTTGTTTATATGGGTGGGAAAGGATCTTGGACACCTCTGCACGCTGATGTATTTAGATCTTATAGTTGGTCAGCTAATGT
TTGTGGTAGAAAAGATGGCTTTTTCTTCTTCCTTCTCAAAGTCATCTTGTTTATGACAGTACATGAAAAATTGCGTTTACAACATATTTGAAGA
GGTGAATGAAAC |
Primers for UN55105 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AGTTTGTTGAGCAATGGGCT |
59.74 |
20 |
AGCGCAGCTTATTTGATCGT |
60.01 |
20 |
239 |
331 |
569 |
2 |
TGGAGTTTGTTGAGCAATGG |
59.691 |
20 |
AGCGCAGCTTATTTGATCGT |
60.01 |
20 |
242 |
328 |
569 |
3 |
GGAGTTTGTTGAGCAATGGG |
60.495 |
20 |
AGCGCAGCTTATTTGATCGT |
60.01 |
20 |
241 |
329 |
569 |
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