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Simple sequence repeat (SSR)
>UN55107
GGAAACACGGAGCCTCTTCTTCATCTTCATCAATCGCCGTTACTTCGCCATCGTCGTCACCGCTTGTTCTTTAGGTTTAGAGAGCAATGACTAA
ACCTCGTGGTACTACTCATATGGCAAAGAAGAAGGATAAAGTTGATTCTGAATCGGATGTGATGAGCTGTATGGCACATCAGCATGCTGAGTTT
TTCGATAAGTTGATAGAGCTCATCCCTGCGAGATTCTACTTACCTGATGAGACGGAGAGGAAGTGGTTTCCAGGTCTCAGCAAGGCTCAGAAAG
CTAGAGCCAAGAGGAAAACTACGGAGAATCTGAAGAAAGCGAGGAGGGATAGGTTGGACCCTGAGAAGTCTTCTTTGACGACTCTTGATTTGCT
CAAGCAGAAGATCGAGAAGGAGAAGAAGTTGAGTAATCATGAGATTCCTGATGATGATGATGATGATGACAGTGAGGAGGAGGAGGAGGAAACT
GATCACAACAAGAAGCGTAAGAAGACTGATGAGGTTACTTACGAGGAGCTGAGGCAACGTCTCCACCGCAAAATCGATGAGCTTAAAGGTGGTC
GTGGAGGTTCAGATAGACCAAGGCCACGAGAAGAGGAAGAAGGTTGTGCCTAACAAGAAAAAGAGGGAGTCAGTTCTGAGGATGAGACTGTGGA
AGATAA |
Primers for UN55107 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CGGAGAATCTGAAGAAAGCG |
60.088 |
20 |
ATCTGAACCTCCACGACCAC |
59.969 |
20 |
275 |
304 |
578 |
2 |
AGAAAGCGAGGAGGGATAGG |
59.805 |
20 |
ATCTGAACCTCCACGACCAC |
59.969 |
20 |
263 |
316 |
578 |
3 |
CGGAGAATCTGAAGAAAGCG |
60.088 |
20 |
TGCCTCAGCTCCTCGTAAGT |
60.156 |
20 |
223 |
304 |
526 |
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