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Simple sequence repeat (SSR)
>UN55141
GGGAGCTATTCTCCTGAAAAAGAAATGCTTCCGCTTCACGCTTTTACTGGATTCTTGAAATAGGGTTTTGCGTGAGATTAGGGAAAACAGAAAG
CAAGATTTGGCGTTTTCCTTCAACTTGGTTACTAGCGGCGGCGGCGGCGGCTTATCTCCGGGGAAGTTAAGGAGTATGCTTCTCGGTGTTGATA
GAAAGAAGAAACAAGATATGCTTGAAACTGGGTCAAACCAAATCCATGACCTTGCTGCTAGTGGATCAGATGATTGCAAAGACGTTGATGTTGT
TGTGACTGAGATCACTGATTCTTCTACTTCTGGTACGGCTGGAGATCTTCAAGTTCAAGATGAGTACCCTGGTCTTGATTACGGCAATGTGAAC
GAGATCAAGAGCCTTTCTTCTACTGCATCATCCCTCTTTGAGTTTCAAAAGACAGACAAGGAGAAGACCACTCCAAGAATGTCCGTCAGATCAT
TCTCTAAACCGGCTCCATCTAAATGGGACGACGCTCAGAAATGGATCGCTAGTCCGACAGCTAACCGTCCCAAGACAGGACAGGTTCACGCTCC
TGCGTCGAAGAAAGGGCATAGCTTCGGTCGGCAGCTTCTATGAAGATCGTTGAT |
Primers for UN55141 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GATTTGGCGTTTTCCTTCAA |
60.053 |
20 |
TCTCCAGCCGTACCAGAAGT |
59.867 |
20 |
230 |
98 |
327 |
| 2 |
TTCCGCTTCACGCTTTTACT |
60.018 |
20 |
GCAAGGTCATGGATTTGGTT |
59.797 |
20 |
215 |
29 |
243 |
| 3 |
CTTCCGCTTCACGCTTTTAC |
60.018 |
20 |
GCAAGGTCATGGATTTGGTT |
59.797 |
20 |
216 |
28 |
243 |
|
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