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Simple sequence repeat (SSR)
>UN55166
GGAGGACTCAGCAACCAACCCAACATTTCTCCCTCGTGACAAATCTCAATTTTGCAGAAGAAGAAGAAGAAGACAGAAACTGAAACTTAGTTTT
CTTATCAATGATGTCAAGTTCTATGGAGTGCTCTGATTCCGCCGCTACTCGGAGATTCTCCAGAAATCCGGGCTTCTCCCTGACGTGTAGTCGG
CTGAGTCAGTATCTGAAAGAGAACGGTAGCTTTGGAGATCTGAGCTTAGGGATGTCATGCAAGCCTCAAGTCAACGGCAACTCACGTCAGCCCA
CAACAACAATGAGTGTATTCCCCTGTGAAGCTCCTTCCATGGCTATTGGTCAAGTTGTTAAACCGGTGAATCTGTTTACTCGGCAACCAAGCTT
CTCTTCCTCATCTTCCTCTCTCCCCAAGGAAGAAGATGTCCTCAAAACGACACAGACCATTTCTACTACTAGATCTGTGAAACCAGAGCCACAA
ACTGCACCGTTGACTATATTCTACAACGGGGAGGTGATTGTGTTCAACGACTTTTCTGCTGAGAAAGCCAAAGAAGTGATGAACTTGGCTAGCA
AAGGAACCGCTAATAGCTTCACCGGTTTCACATCTACTCTTAACTTAGCCAAGAATCAAACCGAGGTCAGAGCTCCTACCTCTAACCAAGCTCC
TCATCTCATGAAACCGCAGCACACAGACCATCATATCCTCTCACTGCATGGCATGCGACTTCTATGCTAGAGAGCTCACTCACGGTCT |
Primers for UN55166 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AGCAACCAACCCAACATTTC |
59.836 |
20 |
TGAGTTGCCGTTGACTTGAG |
60.025 |
20 |
263 |
10 |
272 |
| 2 |
GCAACCAACCCAACATTTCT |
59.836 |
20 |
TGAGTTGCCGTTGACTTGAG |
60.025 |
20 |
262 |
11 |
272 |
| 3 |
GCAACCAACCCAACATTTCT |
59.836 |
20 |
GTGAGTTGCCGTTGACTTGA |
59.88 |
20 |
263 |
11 |
273 |
|
|
