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Simple sequence repeat (SSR)
>UN55442
GGTAAATAAAATGGTATTATTTTAAGCAAGTCAACAAACTAAAACAAGTTCATCAAAAGAATCAATAAAACAAATGATTACACAAGACCAAGAA
AAGATTGTAAAAGAATATAAATCTATATCCAATCCAAAAGTCATATGAGATTAGCATTTTACTAAAATCACGATTTTTCCCAATCGGATTATCT
TTTTCTTGGCCTGTAAAAAGTTGTTTCCAGGTGAATTCTACACTTTCAAAATAGATAAAAATAATTGAGTTTTCACTGCTTGCCTTTCCAGAAC
TCCCAACATGATGATTACAGAGCTTAATGATGATGATGATGATGATGATGATAGCAATCCCCACAAGGAACCATGAAAACAGAGTCCAGAAGCA
GAAAAAATGCCCCTTTTTAGCTTCTTCTTTTGTTTTTTTGCTGAGTATGGGGGGTGGTTAAGCACAGTACATGTACAAGCTATTTCCAGCAGCG
CAAGCAATTAAGTTCTCATTTGGATGCCAAGCAAGATGCAGCAACTTCGTTGTGTAATCAAGAGCATTGCTGCTATTCCCATCGACTCCAGCAG
TACTCTCTGATCCTCCTCTACCTAGTATACTGCCTAGTTTGGATGGCCTTGAGGGAACTGGGACATGTCTCCTCATCGGGTTTCTGCTTGCTTC
CAACGTTGCAGTCTCACTACTTCCCGGAGAAACACCAAACACACGGAACAGATTGCTGTAAGAACCTGCAGCTG |
Primers for UN55442 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCTTTCCAGAACTCCCAACA |
60.081 |
20 |
TACTGTGCTTAACCACCCCC |
59.853 |
20 |
175 |
271 |
445 |
| 2 |
CCTTTCCAGAACTCCCAACA |
60.081 |
20 |
ACTTAATTGCTTGCGCTGCT |
60.18 |
20 |
213 |
271 |
483 |
| 3 |
TTTTCACTGCTTGCCTTTCC |
60.365 |
20 |
TACTGTGCTTAACCACCCCC |
59.853 |
20 |
188 |
258 |
445 |
|
|
