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Simple sequence repeat (SSR)
>UN55566
GATATGAAATCTCTAAATTAAAGAGGGGAAATTTTCAAAATTTTACAATTATTTCCATAAGAATAATATAATAATAATAATAAACCTTTTTCTC
ATTTCCGTACTCTAAACCAAAACAGAGCTTACTTGCAGTTGCTTTAGAGGCTGAAGAGATTCAAGGGAGCTTGATCAGGTGGAGTGGCGGTGAA
GGGAAAAGGCAAGAAGAGAGGACGCTTAGCTGCAAATGGCTTGACTGGACAAGTAGTGGAAGAACGGGATGGTCGGTTGGGACTTGGCAAAGAA
GCAATCTCATCAGTATCAGTAGCAGCAGCAAGAGCAGGCAGGTTGGGCCATGAGAAACTCGCCACAGGCCTGCAGATTCTGAAACCAGTGTTGT
TTATAAGTGAAAGTGGTGATCTCCTGCCTTTTTGAGGGAACTCTGTCTCGTTGTTCACTTCCTCTGGTGTCTTCATCATTGGTGAATCCTCTAG
TAGCAAAGGCGTCTCTATTGAGTCTGGCTTTCTAGGACAATTCCCATCCACTGTTTTCTGAAGCCATCCCATATCTTCCTCCATTTTATGCAAG
GTTTCGGCAATTATCACTAGCTGGTCCTCGATTTTGTATTTCTTCTTCAGCAGATCGGCATAGATCTCCTTTGCTAGAGGCATCATATTGTCTT
GGTCCACGTTCTGAGTTGTAACACATGAATTAGTGTAGTCATGATAGCAAGCTCCTCGTCCTTCTTTGAAGCGAGTTTCTCCAATTCTC |
Primers for UN55566 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AAATTAAAGAGGGGAAATTTTCAA |
58.595 |
24 |
CTTCTTTGCCAAGTCCCAAC |
59.711 |
20 |
269 |
15 |
283 |
| 2 |
AAATTAAAGAGGGGAAATTTTCAA |
58.595 |
24 |
TTTGCAGCTAAGCGTCCTCT |
60.292 |
20 |
210 |
15 |
224 |
| 3 |
AAATTAAAGAGGGGAAATTTTCAA |
58.595 |
24 |
TTGTCCAGTCAAGCCATTTG |
59.691 |
20 |
226 |
15 |
240 |
|
|
