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Simple sequence repeat (SSR)
>UN55716
GGGGAGAAGAGGTAAAGGCTTCTTCCCTCCCTCCTCTTCAATCTCTTATATACGATGCCGTATCACACTTCCTCTTGTACCAATCTTCACCGTC
GTCATCGTCTCGCTTTCGTCTAACCAGATAGTATCTACCGTTGAATTAGTTCCTTCGCCTGCGTGAGAGAGCCATGCCTACTTTCTCAGCAATT
GCTTTGGATAGAATGATAGAGCCAGGTGCTGCTTCCACGTGTCTTCCAACCACAACAAAGTCTTCGTCTCATAATTACTCAAAGCCGCCTCCTC
CTCCTCCTCCTCGGATGTCACCGGCTCTCTACGCCACTCCTGACGCAGTTCCACTCCCCAACTCTCCCTCTTCCTCTTCCTCTTCTTTCCGCCC
TCTCCTTACATCATCAACCACAAATCACGCGGCCCTCCCCGTCGTCTTTTGAAATCCTCTTCTGAGGCTAATGTTGCTGATGAAGGTCTTGTTA
CTGATGTCATGAAGGCTTCTCCTCGGAGGAAGTCCACCTCTTTCTCCTTTCCCATCACCGAGGCTACTGAAGAGGATTATTATGGAAGCTTTGA
TTTTGATTCGAAGCCGGAGTTGGATAATGCTGCCAATAATGATTTAGAATGTGAAGAGCCTGTAACTGCCAAGGTAGATAAGGAGAGTGAGTCT
GAAGATTTCTACGACCCCGGTGAGTCAGCAAGCTTCACTAGTAACACGGACGCTGGAGAGGACGGCTCAAACAGACTCGCTACTCCTGTGGGAG
AGTTTTACGATGCTTGGGACGAGCTATCAACCGACAGTGGAATG |
Primers for UN55716 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CGTCTCGCTTTCGTCTAACC |
60.015 |
20 |
AGTGGAACTGCGTCAGGAGT |
59.907 |
20 |
238 |
100 |
337 |
2 |
GCCATGCCTACTTTCTCAGC |
59.985 |
20 |
AGTGGAACTGCGTCAGGAGT |
59.907 |
20 |
173 |
165 |
337 |
3 |
CGTCTCGCTTTCGTCTAACC |
60.015 |
20 |
GAAGAGGGAGAGTTGGGGAG |
60.186 |
20 |
256 |
100 |
355 |
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