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Simple sequence repeat (SSR)
>UN55908
GGACGGAAGACCTTCCTTTTCTGGCACCGCCGCAATTTTCTCCGGCAGAAAAGAAAAAAAAACCCTAGAAATCAGAATTGCACAACGACGACGG
ACGGAGAGGGTTTGAGTATTTGAATTCGATTTATTTCTTCTTATCCCCTTCCAGATTCAAAAAACATAAAAACCCTAACCCCTAAAATCCACGT
TCGATTGGCTTTACTGTTTTGTCGGAATCCCATCAGTTTCGTGTTTTGTCTTTTTGCATCTTCCTGTCTCTTATTGGAGCTATATTTATCTGTC
TAAACACACACACACACTCTTGTAAGGAAGGTAAAATGAGCAGACTTTCTTTCCGTCCACGGCCGTTAGACATTCACAAGAAGCTCCCCATTCT
AAAATCTCTTAAAGACTTCGAAGACGACGGCACGCCGACTTCCGCCACCAGAAACTCTCAGCTCCTGCGTATTGCTTCTTCTTCTGTAGATGTT
GACAATGAGCAGGCGCATCCAGTGGTGCCAAGCAAGAAACTTGCTTCGGAGATACCAACGCCTCAGTTTGTTGTTGTGGATACGTATGAGAGGG
ATTATTTAGCTACTTTTGGTCAACCTCCTTCTTATCTACGTGCTAGAGGAGCTCGGTCTGAGCTTGGAGAGTTTGTGGAGTATGATCTTGACAA
TGAGGATGATGACTGGCTTATGAGTTT |
Primers for UN55908 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CTGTTTTGTCGGAATCCCAT |
59.79 |
20 |
CGCAGGAGCTGAGAGTTTCT |
59.891 |
20 |
244 |
202 |
445 |
| 2 |
CTGTTTTGTCGGAATCCCAT |
59.79 |
20 |
GAATGGGGAGCTTCTTGTGA |
60.195 |
20 |
174 |
202 |
375 |
| 3 |
TTTGTCGGAATCCCATCAGT |
60.317 |
20 |
CGCAGGAGCTGAGAGTTTCT |
59.891 |
20 |
240 |
206 |
445 |
|
|
