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Simple sequence repeat (SSR)
>UN56004
GGGAGGATCTACGAAACTTCGATTTGGGGGTTTTCTTTTCTTCTAGATCCTAGCTAATTCGTCTAAAGACGTCGCCTTTTGACGACGACGACGA
CGACGACGACCCTTTCTCTCTTTTTCCTCCGCCTTCCTCCACGCACAACAAATCTCTCACTTTTTTTCCTCAACTATGCCTTCCAATACGGCGT
CGTCTAGCTCCGCCCCTGCCGGATCTGCAGATTCTTCCTCCTCCCGTACAAAATCCAAACGACCCAAGTATTCGAAGTTTACACAGCAGGAGCT
TCCTGCTTGCAAGCCGATTCTCACGCCTGGTTGGGTGATTCTGACTTTTTTGGTCATTAGCGTGATCTTCATTCCACTCGGAGTTGTTTCGCTT
TTCGCTTCCCAGGATGTTGTTGAGATCGTTGATCGGTATGATAATGATTGCGTACCGACGCCTGCTAGGGCTAACAAGGTTGCCTTTATTCAAG
GAGGTGGAGACAAATCTTGTAACCGGACACTTGTATTCACCATCATGTATCTTGTGGAACCAAGCGACTTGGAGATCCTACTTACTTATCCTGG
AACAGAGTTCCCGGTGGTGGTCGGTAAACAAAGACTCTTTTATCATCTGCTTTTATGTAATCTCTTTATCCATGATTGTAATTTTAGCCAAAAC
TGAGAGTGATAGTTTGTATTTATAGATGTGTAGTGCATGATGATGTACAGTTGAAGATGCCACATGATGATGCGTCTATCATATC |
Primers for UN56004 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TACGAAACTTCGATTTGGGG |
59.931 |
20 |
AAGGCGGAGGAAAAAGAGAG |
59.955 |
20 |
120 |
10 |
129 |
2 |
TACGAAACTTCGATTTGGGG |
59.931 |
20 |
TGGATTTTGTACGGGAGGAG |
59.926 |
20 |
236 |
10 |
245 |
3 |
GAAACTTCGATTTGGGGGTT |
60.166 |
20 |
AAGGCGGAGGAAAAAGAGAG |
59.955 |
20 |
117 |
13 |
129 |
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