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Simple sequence repeat (SSR)
>UN56090
GGAGGATAAAAGAATTTGTTTATTAATAGTTGTTTCCTACCCGTTTTCATGAAACCTACACAATAAAAATTAGATAAAAAGAATTCACAACATT
GTGGAATGGAACAATTCGTACTCGCACATAATAACATTGCACAGTTATCATCATGATCTTCAGAGGATAACGTCATTCCTAATATTTTTCAAAA
ACATCCTAAGCTCTCTGGCCTTTCTGCAGTGTTCATCATCATCATCGGTGTCTGAATCACTCAGCTCAATCACATTCTCAAGTTTCTGATCATG
GCACTTCTGCTCCTGAGACTTCAGTTCTTGATAACTTCTTGACACGTTCCGTGACCGAGCTTCAGGACAAGGGCTAATCAGATTAATGACTTCT
GTTTCCGGATAGAAAGAATAAGAGCTCGGGCCAGCACCGAAGCTACCAACGGTCGACCAACCAATGCTGGAGTTTTCTTTAGAAGCAGGTGACT
CGAGTAGACGCAAGTAATCATGTTTCTTGGATTTTCTCTGTTCCTTCTCTTGCTCTGCTTCTTCTATGGTGCTTGTGGCTAGGAAAGATGATGA
ATTAAGATCAATCTGTTGGAGTTTGAGGCTGAGTTCGATAAGTGAAGAAGCTTTAGTTGGTGAACTTGTTTCCCTCTCTTTTGATTTAGGTTGC
TTTTGTTTCGGCTTCTTCTTCTTCTTTGCTTCCATTTTCTACTTGAACTCAATGATCTTCTCAGGACAAGCCCTTTCTACAAGATCTGCAGGAA
CAATAGACGTCTCTAACCCTTCTAGATCATTCCATGAGACTTCAAAACATTCTCGTCCTTGTAATTTGCGAGTCTTAATGATTTCAGACACCGG
GCACTTCTCTGGTACCTGTGGCTTGTGGAGAGGATGATTAACGCCACCTCAGTTGAACTTGATTGCAGAATAGCAAACCTTC |
Primers for UN56090 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GGAGTTTGAGGCTGAGTTCG |
59.989 |
20 |
AGAAAGGGCTTGTCCTGAGA |
59.014 |
20 |
155 |
582 |
736 |
2 |
GGAGTTTGAGGCTGAGTTCG |
59.989 |
20 |
CGCAAATTACAAGGACGAGA |
58.917 |
20 |
241 |
582 |
822 |
3 |
GGAGTTTGAGGCTGAGTTCG |
59.989 |
20 |
TCGCAAATTACAAGGACGAG |
58.917 |
20 |
242 |
582 |
823 |
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