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Simple sequence repeat (SSR)
>UN56175
GTTTAATCAGTAATCAACTCCCTTGGAAACAACTTCTTTGCAAGTAGGTTCGAGTAAAATGGTGTGTTCAAACTGTGACACATAAAGACTTCGT
GCACTATAAAGACTAAACTAAAAGATTAACAAGAGGACTTGGATAGACGTAAGAAACGAAATCGGTCTTGCAGTTGGAGGATGCAGCTCCAACG
AGCGTCATGGGTTTGCAATATATGACCATCATCAACCAAAACGCCCCCAAGAATACTCATCAAATGTTCCAACTCTCTAGCCGTTCCTCCAAAG
GCAAGAAGATGCAACACCTTCACTTTGACGAGATGCATGGTACCATCGCATGTGTACTCATCCAGACCGTGGATGAGTAGAGTACAGAGATTTG
GAGACTGCTTGATAAGGCAAGGCAGCAGTTTCCAGCATCGTTTGTTGTCACCCCAAAAAAATAAGTTAATCAGATTCTTGAACATCGGTAGAGA
TAGTCCGTGTTTAACACATCGAGAAATCACCTGAAACATCATCACACACACACACATATATGCTTCAATAATGAGAGTGTCTTTTTTTTTATGA
GTTACATTAAGTAAAAACTTACATTAGTAGAAGCAGGAGTAAGATGCAGGGTGTGGACGTTGCTTATCCCATTAATGAGACCAGACATATCAGG
CCTCTTGATTAATTTAGAATAATGAATATTCAGCCAAGCTTGAACTAGGGACTCTAAGTCCACTTGTGGGTACTCTTCCAATGCATAATCTGAG
TAGTTGAGGGAGACAAGATTCGGTGCGTG |
Primers for UN56175 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AGCAGTTTCCAGCATCGTTT |
59.882 |
20 |
ATGGGATAAGCAACGTCCAC |
59.82 |
20 |
237 |
400 |
636 |
| 2 |
CAGCATCGTTTGTTGTCACC |
60.16 |
20 |
ATGGGATAAGCAACGTCCAC |
59.82 |
20 |
228 |
409 |
636 |
| 3 |
CCAGCATCGTTTGTTGTCAC |
60.16 |
20 |
ATGGGATAAGCAACGTCCAC |
59.82 |
20 |
229 |
408 |
636 |
|
|
