Simple sequence repeat (SSR)
>UN56280
GTTTGAACAACAAAAGTCTCTTTTTTTCTTTCTTTTTTTATGTCACAACCTTTTTTTTTAGTCGTTTACTGTGAAACAAATGAAAAAAAATGTT
TTAACATAAAATAATAATAATAATAAGCAAACAGAATGTCACTTTCTTGTTTTCAGGAGGAGGATTTTTTTTTTGTGTATTATGAAGTGAATAA
GCCCCAAAATGATCTGATGGCAAAATTTCCTTGATCTTGTCAAGTCTCTTGAAAATCTCCAAAAACGATGGTCTCTGGTTCATGTCTGCGTCCC
AGCATTTCACTATTAACTCTCTTAAATCAGGGGTGCATCCTTTGGAACGGAAAGTAGGTCTGTGTCCATCTGATACATGTTTGGCCGCTTCATA
CGGCTCGTAATTCGCAAATGGGGGCTCTCCTTCTAGCATCTCGTAAAGTATCATTGCAAAGGAAAA |
Primers for UN56280 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCGTTTACTGTGAAACAAATGAAAA |
59.963 |
25 |
ATAGTGAAATGCTGGGACGC |
60.103 |
20 |
234 |
62 |
295 |
| 2 |
TCGTTTACTGTGAAACAAATGAAAA |
59.963 |
25 |
CATCAGATCATTTTGGGGCT |
59.894 |
20 |
146 |
62 |
207 |
| 3 |
TCGTTTACTGTGAAACAAATGAAA |
58.765 |
24 |
ATAGTGAAATGCTGGGACGC |
60.103 |
20 |
234 |
62 |
295 |
|
|
